| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545159
Identifier: 17545159
GI number: 17545159
Start: 467372
End: 468175
Strand: Direct
Name: 17545159
Synonym: RSc0440
Alternate gene names: NA
Gene position: 467372-468175 (Clockwise)
Preceding gene: 17545158
Following gene: 17545161
Centisome position: 12.58
GC content: 70.15
Gene sequence:
>804_bases ATGCGTCGGGTGATGGCATTGGTGTTGGCGTTGGCTGCGGTGGCCGGCGCATGGCAATGGAGCCGGCATGACCGCGCGCG GCTGACGCATGTCCGGTTTTCGCCGATCGAGACCGTGGCCGCGGCCACCGACACGCCGCCGGGCGGCACGCCCCTGCCGA TGGGCGCATCCAAGAGCTATTGGCTGAAGACTTGCGATGAGCGGCTGGGGCCGATGCATGTCACCGTGCGCACCAACGAG ACGCCGCTGGCCTTCACCAACGACCGCTCCGTCGACCAGCTCACCGCCGAGGCCCCGCCCTATGACCGTGCCTCGCGCGT GCTGGGCAAGACGTACGCCACGCTGGCCGCGCAGTTCGCCGTCACGACCCGCTACATCGCCCTGCCGACGCAGCCGCCGA CCACCTGCCTGCGGCCGTCGGTTGACGTGGTGCTGATCTTGAGCGATTTCCGCGTGACGGTGGCGCGCGAGTTCGCGCCG GGCTCGTGCGCCTACGAGGCGATCCGCGCGCACGAGATGCGGCATGTGGCCGTGAACCGGGCCGTGCTGCCGCGCGCGGC CGAGCTCATCCGCCAGGAGATTCAGCGCGAATACGGCGGCCGTCTGTACTTCGGCGATCCGGACCGCATGGCCGCCGAAC TTGAGGCGGCACTCTCGCGCCACTGGCTGCCGCGCGCGCGGTCGCTGATCGAACTGGGGCTGCAGGCGCACGAGCAGATC GACACGCCCCAGGAGCAGGACCGCATGAGCCGGGTGTGCAACGGGGACGTGCAGGCCGTGCTGCAGCAGCTCTCGCGTAG CTGA
Upstream 100 bases:
>100_bases CGCGGTGCCGGCGGAATGCGCGCCGGCATGACACAGACACAGACGGCGCCCGAAAAGCGCTGCATGCACGAATGGAATGG CATCGAACGGGGAGCCCATC
Downstream 100 bases:
>100_bases CGCAGTTGATGCGCCGTGGCAGCGGCGCGTGCGCGTCAGGCCGCCGGGCGATGCGCCATGCGCGCCTGCAGCTGTTCGAC GGCCTGCTGCGCGACGGTCT
Product: signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MRRVMALVLALAAVAGAWQWSRHDRARLTHVRFSPIETVAAATDTPPGGTPLPMGASKSYWLKTCDERLGPMHVTVRTNE TPLAFTNDRSVDQLTAEAPPYDRASRVLGKTYATLAAQFAVTTRYIALPTQPPTTCLRPSVDVVLILSDFRVTVAREFAP GSCAYEAIRAHEMRHVAVNRAVLPRAAELIRQEIQREYGGRLYFGDPDRMAAELEAALSRHWLPRARSLIELGLQAHEQI DTPQEQDRMSRVCNGDVQAVLQQLSRS
Sequences:
>Translated_267_residues MRRVMALVLALAAVAGAWQWSRHDRARLTHVRFSPIETVAAATDTPPGGTPLPMGASKSYWLKTCDERLGPMHVTVRTNE TPLAFTNDRSVDQLTAEAPPYDRASRVLGKTYATLAAQFAVTTRYIALPTQPPTTCLRPSVDVVLILSDFRVTVAREFAP GSCAYEAIRAHEMRHVAVNRAVLPRAAELIRQEIQREYGGRLYFGDPDRMAAELEAALSRHWLPRARSLIELGLQAHEQI DTPQEQDRMSRVCNGDVQAVLQQLSRS >Mature_267_residues MRRVMALVLALAAVAGAWQWSRHDRARLTHVRFSPIETVAAATDTPPGGTPLPMGASKSYWLKTCDERLGPMHVTVRTNE TPLAFTNDRSVDQLTAEAPPYDRASRVLGKTYATLAAQFAVTTRYIALPTQPPTTCLRPSVDVVLILSDFRVTVAREFAP GSCAYEAIRAHEMRHVAVNRAVLPRAAELIRQEIQREYGGRLYFGDPDRMAAELEAALSRHWLPRARSLIELGLQAHEQI DTPQEQDRMSRVCNGDVQAVLQQLSRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29710; Mature: 29710
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVMALVLALAAVAGAWQWSRHDRARLTHVRFSPIETVAAATDTPPGGTPLPMGASKSY CHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCHH WLKTCDERLGPMHVTVRTNETPLAFTNDRSVDQLTAEAPPYDRASRVLGKTYATLAAQFA HHHHHHHHCCCEEEEEECCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VTTRYIALPTQPPTTCLRPSVDVVLILSDFRVTVAREFAPGSCAYEAIRAHEMRHVAVNR HHEEEEEECCCCCCHHCCCCCCEEEEEECCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHH AVLPRAAELIRQEIQREYGGRLYFGDPDRMAAELEAALSRHWLPRARSLIELGLQAHEQI HHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC DTPQEQDRMSRVCNGDVQAVLQQLSRS CCCHHHHHHHHHHCHHHHHHHHHHHCC >Mature Secondary Structure MRRVMALVLALAAVAGAWQWSRHDRARLTHVRFSPIETVAAATDTPPGGTPLPMGASKSY CHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECCHHHHHHHCCCCCCCCCCCCCCCCCHH WLKTCDERLGPMHVTVRTNETPLAFTNDRSVDQLTAEAPPYDRASRVLGKTYATLAAQFA HHHHHHHHCCCEEEEEECCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH VTTRYIALPTQPPTTCLRPSVDVVLILSDFRVTVAREFAPGSCAYEAIRAHEMRHVAVNR HHEEEEEECCCCCCHHCCCCCCEEEEEECCEEEHHHHCCCCHHHHHHHHHHHHHHHHHHH AVLPRAAELIRQEIQREYGGRLYFGDPDRMAAELEAALSRHWLPRARSLIELGLQAHEQI HHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC DTPQEQDRMSRVCNGDVQAVLQQLSRS CCCHHHHHHHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA