| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is 17545143
Identifier: 17545143
GI number: 17545143
Start: 452296
End: 452553
Strand: Reverse
Name: 17545143
Synonym: RSc0424
Alternate gene names: NA
Gene position: 452553-452296 (Counterclockwise)
Preceding gene: 17545144
Following gene: 17545139
Centisome position: 12.18
GC content: 65.5
Gene sequence:
>258_bases ATGAACCGTCGCCACTTCGCGCTCGCCGCGCTCATGCTCGCCCTCCTCAGCCCCGCGGCACGCGCCGACCTGGGCGAGAT GAAGCAGGACATCAAGCAAGGCTCGAAAGATGCCGCGAAAAAAACGGGACACGCCGCGCGGGAATTCGGCCACGCGACCG CCAACGCGGCCAGGACGGTCGGTCATGGCGTAGCGAACGCGGCGCACGAGACCAAGCGGGCCACCAAGCGGCTCTTTCAC AAGAACGATTCGGAATGA
Upstream 100 bases:
>100_bases TGCTGGACGCGGCCGGCCTGGGCCTGCCGGATGCCGGTGCGCTCGCCAAAGCCAACGCTCAGGCGCGGTAGCGTCAACAC TTGTTCGGAGGACAGACACC
Downstream 100 bases:
>100_bases AAGACCGGCCCCGCACGATGGCGGGGCCGGTCATCAGGAGAACAACCCGGGCGCGGTCAGTCATCACCATCACACGGTCG ATGCGCCTGAGGCACGAAAT
Product: signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MNRRHFALAALMLALLSPAARADLGEMKQDIKQGSKDAAKKTGHAAREFGHATANAARTVGHGVANAAHETKRATKRLFH KNDSE
Sequences:
>Translated_85_residues MNRRHFALAALMLALLSPAARADLGEMKQDIKQGSKDAAKKTGHAAREFGHATANAARTVGHGVANAAHETKRATKRLFH KNDSE >Mature_85_residues MNRRHFALAALMLALLSPAARADLGEMKQDIKQGSKDAAKKTGHAAREFGHATANAARTVGHGVANAAHETKRATKRLFH KNDSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9144; Mature: 9144
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRHFALAALMLALLSPAARADLGEMKQDIKQGSKDAAKKTGHAAREFGHATANAARTV CCCHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GHGVANAAHETKRATKRLFHKNDSE HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNRRHFALAALMLALLSPAARADLGEMKQDIKQGSKDAAKKTGHAAREFGHATANAARTV CCCHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH GHGVANAAHETKRATKRLFHKNDSE HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA