| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is pfpI [H]
Identifier: 17545135
GI number: 17545135
Start: 443612
End: 444190
Strand: Reverse
Name: pfpI [H]
Synonym: RSc0416
Alternate gene names: 17545135
Gene position: 444190-443612 (Counterclockwise)
Preceding gene: 17545138
Following gene: 17545134
Centisome position: 11.95
GC content: 68.39
Gene sequence:
>579_bases ATGGCGAAGAAGATTCTGATGCTGGTGGGCGACTATGTCGAAGACTACGAAGTCATGGTGCCCTTCCAGGCCCTGCAGAT GGTCGGCCACACCGTGCACGCGGTCTGCCCGGACAAGCAGGCCGGCGAATCGATCGCCACCGCCGTGCACGACTTCGAGG GCGCGCAGACGTATTCCGAGAAGCCGGGCCACCGCTTCACCGTCAATGCCAGCTTCGCCGACGTCGATCCCGCCGCCTAT GACGCGCTGGTCGTGCCCGGCGGCCGCGCTCCCGAATACCTGCGCCTCGATCCGCGCGTGCTCGACATCGTGCGCCACTT CAGCGGCGCCGGCAAACCCATCGCGGCGATCTGCCACGGCGCGCAGCTGCTGTCGGGGGCGGGCGTCCTGAAGGACCGCG CGTGCTCCGCCTATCCGGCATGTGGCCCGGAAGTCACGGCAGCGGGCGGCACCTACCAGGACATCCCCGTCGACCAGGCC CATACCGACGGCAACCTGGTGACCGCGCCCGCGTGGCCGGCCCACCCCGCATGGCTGGCGCAATTTCTTGAAGTCCTGGG GACGCGGGTCCTACACTGA
Upstream 100 bases:
>100_bases AGCCGGCTACCACCCGGCCCGGATGGCGCCGCACCACAATGCGGCAGGCACGGTGCACGGCAGCCGCCATGCACAAACTG CAACCATACAGGAGACGACG
Downstream 100 bases:
>100_bases TCGGACTGCCCGCGCGCCGGGCGCTCCCGCCCGGAGACCCCGCCATGTGCGAAATCTTCATCCGCGCCAATCCGCAGTCG TACGAAACCCAGGCCCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: Intracellular protease I [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MAKKILMLVGDYVEDYEVMVPFQALQMVGHTVHAVCPDKQAGESIATAVHDFEGAQTYSEKPGHRFTVNASFADVDPAAY DALVVPGGRAPEYLRLDPRVLDIVRHFSGAGKPIAAICHGAQLLSGAGVLKDRACSAYPACGPEVTAAGGTYQDIPVDQA HTDGNLVTAPAWPAHPAWLAQFLEVLGTRVLH
Sequences:
>Translated_192_residues MAKKILMLVGDYVEDYEVMVPFQALQMVGHTVHAVCPDKQAGESIATAVHDFEGAQTYSEKPGHRFTVNASFADVDPAAY DALVVPGGRAPEYLRLDPRVLDIVRHFSGAGKPIAAICHGAQLLSGAGVLKDRACSAYPACGPEVTAAGGTYQDIPVDQA HTDGNLVTAPAWPAHPAWLAQFLEVLGTRVLH >Mature_191_residues AKKILMLVGDYVEDYEVMVPFQALQMVGHTVHAVCPDKQAGESIATAVHDFEGAQTYSEKPGHRFTVNASFADVDPAAYD ALVVPGGRAPEYLRLDPRVLDIVRHFSGAGKPIAAICHGAQLLSGAGVLKDRACSAYPACGPEVTAAGGTYQDIPVDQAH TDGNLVTAPAWPAHPAWLAQFLEVLGTRVLH
Specific function: Highly stable protease. Although the physiological function is unclear it is the dominant protease in P.furiosus [H]
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PfpI endopeptidase domain [H]
Homologues:
Organism=Escherichia coli, GI87082219, Length=189, Percent_Identity=34.9206349206349, Blast_Score=106, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006286 - InterPro: IPR002818 [H]
Pfam domain/function: PF01965 DJ-1_PfpI [H]
EC number: NA
Molecular weight: Translated: 20414; Mature: 20283
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKILMLVGDYVEDYEVMVPFQALQMVGHTVHAVCPDKQAGESIATAVHDFEGAQTYSE CCCHHEEHHHHHHHCCEEECCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCCC KPGHRFTVNASFADVDPAAYDALVVPGGRAPEYLRLDPRVLDIVRHFSGAGKPIAAICHG CCCCEEEEECCCCCCCCHHCCEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHH AQLLSGAGVLKDRACSAYPACGPEVTAAGGTYQDIPVDQAHTDGNLVTAPAWPAHPAWLA HHHHHCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHH QFLEVLGTRVLH HHHHHHHHHHCC >Mature Secondary Structure AKKILMLVGDYVEDYEVMVPFQALQMVGHTVHAVCPDKQAGESIATAVHDFEGAQTYSE CCHHEEHHHHHHHCCEEECCHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCCC KPGHRFTVNASFADVDPAAYDALVVPGGRAPEYLRLDPRVLDIVRHFSGAGKPIAAICHG CCCCEEEEECCCCCCCCHHCCEEEECCCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHHH AQLLSGAGVLKDRACSAYPACGPEVTAAGGTYQDIPVDQAHTDGNLVTAPAWPAHPAWLA HHHHHCCCCHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHH QFLEVLGTRVLH HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8626329 [H]