| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
Click here to switch to the map view.
The map label for this gene is nasE [H]
Identifier: 17545099
GI number: 17545099
Start: 408741
End: 409604
Strand: Reverse
Name: nasE [H]
Synonym: RSc0380
Alternate gene names: 17545099
Gene position: 409604-408741 (Counterclockwise)
Preceding gene: 17545100
Following gene: 17545098
Centisome position: 11.02
GC content: 67.94
Gene sequence:
>864_bases ATGGAGCCCGACATGAACACGCTTGCCAAAGCCTTGCCCGGCGCGCACGCCAGCGCCGGTTCCGTACCGCCCAAACCCGC CTGGCGCGACTGGCTGGCGGCCGCCGTCGTCAAGGGATTCCCGCCCATGCTGGGCTTCGCGCTGTTCGTGCTGGCCTGGC AGGGCATCGCCATGGCCATCCCGGCGCTGCCCACGCCGGCGCTCACCTGGAAGGCCGCAGTGGCCCTCTTTGCCGATCCG TTCTACCGCAACGGACCGAACGACCAGGGCGTCGGCTGGAACGTGCTGTCGTCGCTGGCGCGCGTGGGCGCGGGCTTCGG CATGGCCGCCGTAATCGGCATTCCGGCGGGCTTCCTGCTTGGGCGCTTCGCCTTCCTGAACGCGATGGCCTCGCCGATCA TCAGCCTGCTGCGGCCGGTGTCGCCGCTGGCGTGGCTGCCGATCGGGCTGCTGCTGTTCAAGTCCGCCAATCCGGCGGCG ATCTGGGCGATCTTCATCTGCTCGATCTGGCCGATGGTGATCAACACCGCCGTGGGCGTGACGCGCGTGCCGCAGGACTA CCTGAACGTGGCGCGCGTGCTCAACCTGTCGGAATGGAAGATCTTCACCCGCGTGCTGTTTCCCGCCGTGCTGCCCTACA TGCTGACCGGCGTGCGGCTGTCGATCGGCACCGCGTGGCTGGTGATCGTGGCCGCCGAGATGCTCACGGGCGGCGTCGGT ATCGGCTTCTGGCTGTGGGACGAATGGAACAACCTGAAGGTCGAGCACATCGTCATCGCCATCTTCGTGATCGGCGTGGT GGGGCTGCTGCTGGAGCAGGCGCTGCTGGCCGTCGCCCGCAGGTTCTCGTACGACGCCATCTGA
Upstream 100 bases:
>100_bases ACCGCCAGGCTGATCGACGGCGTGGTGTGGGATGCAAAGAACCCCGCCGCCTACGCCGACAGCTTCAAGATCAAGGCCTG ATCTTCGGATCTTCACATCG
Downstream 100 bases:
>100_bases GGAGCCGGGCATGTCCGACAAATTCCTGCGCATCGAAAGCGTTGGCCAGGTCTTCAAGACCCGGAAAGGCCCGTTCGTCG CGCTGCGCGACATCGACCTG
Product: nitrate transmembrane ABC transporter protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MEPDMNTLAKALPGAHASAGSVPPKPAWRDWLAAAVVKGFPPMLGFALFVLAWQGIAMAIPALPTPALTWKAAVALFADP FYRNGPNDQGVGWNVLSSLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSANPAA IWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGGVG IGFWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQALLAVARRFSYDAI
Sequences:
>Translated_287_residues MEPDMNTLAKALPGAHASAGSVPPKPAWRDWLAAAVVKGFPPMLGFALFVLAWQGIAMAIPALPTPALTWKAAVALFADP FYRNGPNDQGVGWNVLSSLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSANPAA IWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGGVG IGFWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQALLAVARRFSYDAI >Mature_287_residues MEPDMNTLAKALPGAHASAGSVPPKPAWRDWLAAAVVKGFPPMLGFALFVLAWQGIAMAIPALPTPALTWKAAVALFADP FYRNGPNDQGVGWNVLSSLARVGAGFGMAAVIGIPAGFLLGRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSANPAA IWAIFICSIWPMVINTAVGVTRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGGVG IGFWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQALLAVARRFSYDAI
Specific function: Probably part of a high-affinity binding-protein- dependent transport system for nitrate; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=200, Percent_Identity=31, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI87081802, Length=139, Percent_Identity=30.2158273381295, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005889 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30824; Mature: 30824
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPDMNTLAKALPGAHASAGSVPPKPAWRDWLAAAVVKGFPPMLGFALFVLAWQGIAMAI CCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH PALPTPALTWKAAVALFADPFYRNGPNDQGVGWNVLSSLARVGAGFGMAAVIGIPAGFLL CCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHH GRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSANPAAIWAIFICSIWPMVINTAVGV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCH TRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGGVG HCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IGFWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQALLAVARRFSYDAI EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEPDMNTLAKALPGAHASAGSVPPKPAWRDWLAAAVVKGFPPMLGFALFVLAWQGIAMAI CCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH PALPTPALTWKAAVALFADPFYRNGPNDQGVGWNVLSSLARVGAGFGMAAVIGIPAGFLL CCCCCCHHHHHHHHHHHHCHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCHHHHH GRFAFLNAMASPIISLLRPVSPLAWLPIGLLLFKSANPAAIWAIFICSIWPMVINTAVGV HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCH TRVPQDYLNVARVLNLSEWKIFTRVLFPAVLPYMLTGVRLSIGTAWLVIVAAEMLTGGVG HCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IGFWLWDEWNNLKVEHIVIAIFVIGVVGLLLEQALLAVARRFSYDAI EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]