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The map label for this gene is glnK [H]

Identifier: 17545061

GI number: 17545061

Start: 374288

End: 374626

Strand: Direct

Name: glnK [H]

Synonym: RSc0342

Alternate gene names: 17545061

Gene position: 374288-374626 (Clockwise)

Preceding gene: 17545060

Following gene: 17545062

Centisome position: 10.07

GC content: 62.24

Gene sequence:

>339_bases
ATGAAACTCATCATGGCCATCATCAAGCCTTTCAAGCTCGACGAGGTCCGCGAGGCATTGTCCCAGGTGGGCGTGTCGGG
TATCACGGTGACCGAGGTCAAGGGCTTTGGGCGCCAGAAGGGCCACACGGAGCTGTACCGCGGCGCCGAGTACATCGTCG
ACTTCCTGCCTAAAGTGAAGATCGAAGTGGCCGTACCCGACGACGTGCTCGAGCGCGCCGTCGAGGCGATCGAGAAATCC
GCGCGCACCGGCAAGATCGGCGATGGCAAGATCTTCGTGACCGACGTCGAGCAGGTCATCCGCATTCGAACCGGCGAGAC
CGGCGGCGACGCCCTGTAA

Upstream 100 bases:

>100_bases
ACTACATGGGTAAGGCGACCGCGTTGCTATCGGTCACCAAGACTTTCCAATAACGATTCGAGGCGGCGCCCCCGCGCTGC
TATCCGAGGAGGAATCCAGC

Downstream 100 bases:

>100_bases
GCGCCAACCAGCCAAGGAAGAGGTCAACAAACATGAAAACCTGGTTCACTCGATTTCTGACGGCGGGGGCCGTCGCCGTG
GCGCTTGCCGGCGCCGTGAT

Product: nitrogen regulatory P-II transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKLIMAIIKPFKLDEVREALSQVGVSGITVTEVKGFGRQKGHTELYRGAEYIVDFLPKVKIEVAVPDDVLERAVEAIEKS
ARTGKIGDGKIFVTDVEQVIRIRTGETGGDAL

Sequences:

>Translated_112_residues
MKLIMAIIKPFKLDEVREALSQVGVSGITVTEVKGFGRQKGHTELYRGAEYIVDFLPKVKIEVAVPDDVLERAVEAIEKS
ARTGKIGDGKIFVTDVEQVIRIRTGETGGDAL
>Mature_112_residues
MKLIMAIIKPFKLDEVREALSQVGVSGITVTEVKGFGRQKGHTELYRGAEYIVDFLPKVKIEVAVPDDVLERAVEAIEKS
ARTGKIGDGKIFVTDVEQVIRIRTGETGGDAL

Specific function: In nitrogen-limiting conditions, when the ratio of Gln to 2-ketoglutarate decreases, P-II is uridylylated to P-II-UMP. P- II-UMP allows the deadenylation of glutamine synthetase (GS), thus activating the enzyme. Conversely, in nitrogen excess P-II is deur

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family [H]

Homologues:

Organism=Escherichia coli, GI1788904, Length=106, Percent_Identity=76.4150943396226, Blast_Score=166, Evalue=2e-43,
Organism=Escherichia coli, GI1786655, Length=112, Percent_Identity=67.8571428571429, Blast_Score=158, Evalue=9e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918
- InterPro:   IPR002332 [H]

Pfam domain/function: PF00543 P-II [H]

EC number: NA

Molecular weight: Translated: 12256; Mature: 12256

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00496 PII_GLNB_UMP ; PS00638 PII_GLNB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIMAIIKPFKLDEVREALSQVGVSGITVTEVKGFGRQKGHTELYRGAEYIVDFLPKVK
CHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCE
IEVAVPDDVLERAVEAIEKSARTGKIGDGKIFVTDVEQVIRIRTGETGGDAL
EEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKLIMAIIKPFKLDEVREALSQVGVSGITVTEVKGFGRQKGHTELYRGAEYIVDFLPKVK
CHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHHHCCCCE
IEVAVPDDVLERAVEAIEKSARTGKIGDGKIFVTDVEQVIRIRTGETGGDAL
EEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1702507; 2878685 [H]