Definition Ralstonia solanacearum GMI1000, complete genome.
Accession NC_003295
Length 3,716,413

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The map label for this gene is ycbL [C]

Identifier: 17545000

GI number: 17545000

Start: 314264

End: 315343

Strand: Direct

Name: ycbL [C]

Synonym: RSc0281

Alternate gene names: 17545000

Gene position: 314264-315343 (Clockwise)

Preceding gene: 17544976

Following gene: 17545001

Centisome position: 8.46

GC content: 69.81

Gene sequence:

>1080_bases
ATGAACGCGCTCGAACACCAACTCGACTATCCCCTGGGCGACACGCTGCCCGCAGGCGGCATCCGCCACCAGGTCGCGCC
CGGCATCTACTGGCTGCGCATGCCGCTGCCGTTCGCGCTGGACCACATCAACCTGTGGCTGCTGCGCGATCGCCAGGACG
GCCAGGACGGCTGGACCATCGTCGACTGCGGCATCAACCACGAAGCCATCCGCGCGTACTGGGAAACCCTCTTCGCCGAC
GGGCTCGACGGCCTGCCCGTGCTGCGCGTGCTGGTCACGCACTGCCATCCCGACCACGTCGGCCTGTCGCGCTGGTTGTG
CGAAGGCGGCGACCACCAACGCTGGAACGTGCGCCTGTGGATGAGCCTGGGCGATTACGCCTTCGCCCGCATGCTGGTGG
GCGGCACCGGCGCGTCCAATGCCGGGGGCGAGTCCGCCGCGCGCCATTTCGCCCGCCACGGCCTGACCGACGCCGAGGCC
GTCGAGCGCATCCGCAACCGCAAGGACTACTACAGCACGCTGGTGCCGGGCGTGCCCGAGCAGTACCGCCGCATCATGGA
CGGCCAGGTCATCGCGATCGGCCCGCACCGCTGGCGTGTCATCACCGGCTTCGGCCACGCGCCCGAGCACGTCGCGCTCT
ACAGCGAAGATGCCGGCGTGCTGATCTCCGGCGACATGGTGCTGCCGCGCATCTCCACCAACGTCAGCGTGTTCGACATC
GAGCCCGAGGCCGATCCGCTCACGCTGTATCTCACCTCGCTCGACAAGTACGAGGCGTTGCCGGAAGACGTGCTGATCCT
GCCCTCGCACGGGCGGCCGTTCCGCGGCCTGCACACGCGCATCCGCCAGCTGCGCGACCACCACGCCGACCGCCTCGCCG
ATACGCTGGCCGCGTGCCGGCGCGCGCCGAGCTCGGCACGCGACATCGTCGACGTCATCTTCAAGCGCCAGTTCGACGTG
CACCAGATGACCTTCGCGATGGGCGAAGCGCTGGCCCACCTGCACGCGCTGTGGCACCGCGGCGAGGTGGTCCGCGCGCC
GGGCGCCGATGGCATCATCCGATTCCACGCACCGGCCTGA

Upstream 100 bases:

>100_bases
TAAGATGGAAGGCCGGCTTGCGAATTGACGTTTACGTTAGCGTCAAAGCCGCCAGACCGCAATGCAGCGGCGACAAGAGG
ATAAGAAAGAGACCCCATCC

Downstream 100 bases:

>100_bases
CGCCGACCAGGAGCCCAGCATGTCCGAACACGACGTTCTCGACGATACCGCCGCCGTGCTGCCGTTTCCCGCACACACGC
CGCATGCGCCTTACTACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta Lactamase; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase Domain Protein; Zinc Metallohydrolase; Metallo-Beta-Lactamase; Zinc Metallohydrolase Glyoxalase II Family; Zn-Dependent Hydrolases; Metallo-Beta-Lactamase Family Hydrolase; Zn-Dependent Hydrolase Glyoxylase; AMP-Dependent Synthetase And Ligase; Beta-Lactamase Class B; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Metallo-Dependent Enzymatic Protein

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MNALEHQLDYPLGDTLPAGGIRHQVAPGIYWLRMPLPFALDHINLWLLRDRQDGQDGWTIVDCGINHEAIRAYWETLFAD
GLDGLPVLRVLVTHCHPDHVGLSRWLCEGGDHQRWNVRLWMSLGDYAFARMLVGGTGASNAGGESAARHFARHGLTDAEA
VERIRNRKDYYSTLVPGVPEQYRRIMDGQVIAIGPHRWRVITGFGHAPEHVALYSEDAGVLISGDMVLPRISTNVSVFDI
EPEADPLTLYLTSLDKYEALPEDVLILPSHGRPFRGLHTRIRQLRDHHADRLADTLAACRRAPSSARDIVDVIFKRQFDV
HQMTFAMGEALAHLHALWHRGEVVRAPGADGIIRFHAPA

Sequences:

>Translated_359_residues
MNALEHQLDYPLGDTLPAGGIRHQVAPGIYWLRMPLPFALDHINLWLLRDRQDGQDGWTIVDCGINHEAIRAYWETLFAD
GLDGLPVLRVLVTHCHPDHVGLSRWLCEGGDHQRWNVRLWMSLGDYAFARMLVGGTGASNAGGESAARHFARHGLTDAEA
VERIRNRKDYYSTLVPGVPEQYRRIMDGQVIAIGPHRWRVITGFGHAPEHVALYSEDAGVLISGDMVLPRISTNVSVFDI
EPEADPLTLYLTSLDKYEALPEDVLILPSHGRPFRGLHTRIRQLRDHHADRLADTLAACRRAPSSARDIVDVIFKRQFDV
HQMTFAMGEALAHLHALWHRGEVVRAPGADGIIRFHAPA
>Mature_359_residues
MNALEHQLDYPLGDTLPAGGIRHQVAPGIYWLRMPLPFALDHINLWLLRDRQDGQDGWTIVDCGINHEAIRAYWETLFAD
GLDGLPVLRVLVTHCHPDHVGLSRWLCEGGDHQRWNVRLWMSLGDYAFARMLVGGTGASNAGGESAARHFARHGLTDAEA
VERIRNRKDYYSTLVPGVPEQYRRIMDGQVIAIGPHRWRVITGFGHAPEHVALYSEDAGVLISGDMVLPRISTNVSVFDI
EPEADPLTLYLTSLDKYEALPEDVLILPSHGRPFRGLHTRIRQLRDHHADRLADTLAACRRAPSSARDIVDVIFKRQFDV
HQMTFAMGEALAHLHALWHRGEVVRAPGADGIIRFHAPA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40261; Mature: 40261

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALEHQLDYPLGDTLPAGGIRHQVAPGIYWLRMPLPFALDHINLWLLRDRQDGQDGWTI
CCCHHHHCCCCCCCCCCCCCCCHHHCCCEEEEECCCCHHHCCEEEEEEECCCCCCCCCEE
VDCGINHEAIRAYWETLFADGLDGLPVLRVLVTHCHPDHVGLSRWLCEGGDHQRWNVRLW
EECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEEE
MSLGDYAFARMLVGGTGASNAGGESAARHFARHGLTDAEAVERIRNRKDYYSTLVPGVPE
EEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCH
QYRRIMDGQVIAIGPHRWRVITGFGHAPEHVALYSEDAGVLISGDMVLPRISTNVSVFDI
HHHHHHCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCEEEECCEEECEECCCEEEEEE
EPEADPLTLYLTSLDKYEALPEDVLILPSHGRPFRGLHTRIRQLRDHHADRLADTLAACR
CCCCCCEEEEEECCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RAPSSARDIVDVIFKRQFDVHQMTFAMGEALAHLHALWHRGEVVRAPGADGIIRFHAPA
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCC
>Mature Secondary Structure
MNALEHQLDYPLGDTLPAGGIRHQVAPGIYWLRMPLPFALDHINLWLLRDRQDGQDGWTI
CCCHHHHCCCCCCCCCCCCCCCHHHCCCEEEEECCCCHHHCCEEEEEEECCCCCCCCCEE
VDCGINHEAIRAYWETLFADGLDGLPVLRVLVTHCHPDHVGLSRWLCEGGDHQRWNVRLW
EECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCEEEEEEE
MSLGDYAFARMLVGGTGASNAGGESAARHFARHGLTDAEAVERIRNRKDYYSTLVPGVPE
EEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCH
QYRRIMDGQVIAIGPHRWRVITGFGHAPEHVALYSEDAGVLISGDMVLPRISTNVSVFDI
HHHHHHCCCEEEECCCEEEEEEECCCCCCEEEEEECCCCEEEECCEEECEECCCEEEEEE
EPEADPLTLYLTSLDKYEALPEDVLILPSHGRPFRGLHTRIRQLRDHHADRLADTLAACR
CCCCCCEEEEEECCHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RAPSSARDIVDVIFKRQFDVHQMTFAMGEALAHLHALWHRGEVVRAPGADGIIRFHAPA
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA