Click here to switch to the map view.

The map label for this gene is ytcJ [H]

Identifier: 17544958

GI number: 17544958

Start: 263876

End: 265714

Strand: Reverse

Name: ytcJ [H]

Synonym: RSc0239

Alternate gene names: 17544958

Gene position: 265714-263876 (Counterclockwise)

Preceding gene: 17544959

Following gene: 17544957

Centisome position: 7.15

GC content: 70.64

Gene sequence:

>1839_bases
ATGACCGCCGACCTCATCCTGCACAACGGCCGCATCCACACCGTCGACCGCGACCGCCCCACCGCCAGCGCCGTCGCCGT
GCGCGACGGCCGCTTCGTGGCCGTGGGCGACGACGCCACCGCGATGGCGCAGCGCGGCCCCGCCACCCGGGTGATCGACC
TGCGCGGGCGCACCGTCATCCCCGGCCTCAACGATTCGCACCTGCACCTGATCCGCGGCGGACTGAACTACAACCTCGAG
CTGCACTGGGAGGGCGTGCCGTCGCTGGCGGACGCGCTGCGCATGCTCCGGGAGCAGGCCGCGCGCACGCCGTCGCCGCA
ATGGGTGCGCGTGGTGGGCGGCTGGACCGAATTCCAGTTCGCCGAGCGCCGCATGCCCACGCTCGACGAGCTGAACCAGG
CCGCGCCCGACACGCCGGTGTTCGTGCTGCACCTGTACGACCGCGCGCTGCTCAACCGCGCCGCGCTCAGGCAGGTCGGC
TACACCCGGGACACGCCCAACCCGCCCGGCGGCGAAATCCAGCGCGATGCCGGCGGCGAGCCCACCGGCATGCTGATCGC
CCGGCCCAACGCGATGATCCTGTACGCGACGCTGGCCAAGGGGCCGAAGCTGCCGCCCGAATACCAGGTCAACTCGACGC
GGCAGTTCATGCGCGAGCTCAACCGCCTGGGCGTGACCAGCGCCATCGACGCGGGCGGCGGCTTCCAGAACTACCCGGAG
GACTACACCGTCATCCGCCAGCTGGCGCAGGAGAACCAGCTGACGGTGCGCATCGCCTACAACCTCTTCACGCAGAAGCC
GAAGGAAGAGCTGGCCGACTTCAAGCACTGGACCGGCAGCGTGCCGTACCGCCAGGGCGACGACTTCCTGCGCCACAACG
GCGCGGGCGAGATGCTGGTCTTCTCCGCCGCCGATTTCGAAGACTTCCTGCAGCCGCGCCCCGACCTGCCCGAGACCATG
GAGCCGGAGCTGGAGGGCGTGGTGCGTCACCTGGTGGCGCAGCGCTGGCCGTTCCGCCTGCACGCCACCTACGACGAGTC
GATCTCGCGCATGCTCGATGTGTTCGAGCGCGTGGATCGCGAGATTCCGTTCGACGGCCTGCCGTGGTTCTTCGACCATG
CCGAGACCATCTCGCCGAAGAACATCGAACGCGTGCGCGCGCTCGGCGGCGGCATCGCCATCCAGGACCGCATGGCCTTC
CAGGGCGAATACTTCGTCGAGCGCTACGGCGCGGCCGCCGCCGGGCAGACGCCGCCCATCCAACGCATGCTGGCCGAAGG
CGTGCCGGTCGGCGCCGGCACCGATGCCACGCGCGTGTCGAGCTACAACCCGTGGACGTCGCTGTACTGGCTGGTGAGCG
GGCGCACCGTCGGCGGCCTGCCGCTGTATCCGCAAGGCCTGCCGCGCGACGTGGCGCTCGCGCTGTACACGCACGGCAGC
GCCTGGTTCTCGGCGGACCAGGGCAACAAGGGGCAGATCAAGGTGGGGCAACTGGCCGACCTGGCCGCGCTGTCGGCGGA
TTTCTTCTCGGTGGACGAAGCCGGCATCAAGGCCATCGAATCGGTGCTGACGGTGGTGGACGGGCGCGTCGTCTACGGTG
CGGCGGAGTTCACCGAATATGGGCCGCCACCGATTCCGGTGCTGCCGGAGTGGTCGCCGGTGGCGCGCGTGCCGGGGCAC
TGGCGGCCGGCCGCGCCGCTGCAGCGCCAGGTGCACCACTGCGCCGGCGCATGCGGGGTGCACGGCCATGCGCACCAGAA
GGCGCGCACGGCCAACGTGCCTGCCGCCGATTTCCGCGCGTTCTGGGGCGCCTTCGGGTGTTCGTGCTTTGCGTTCTGA

Upstream 100 bases:

>100_bases
ATCGCCGACGCTCAGTTCGGCTGGCTGCTGCTGATCCTCTTCGTCACGGTGCTGATTGCCGGCCCGGGGCGCTTCTCGCT
CTCTCCCAAAGCCTGAGACC

Downstream 100 bases:

>100_bases
GGCCGGCGCCACAGCCCCGGCGGCCCCCGCGCGATCGGCGCGCTTCCTGATCGCGCAGGGCAGCCTGCTCGCCTTCGTCG
CCGGCTACATCGACGTGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MTADLILHNGRIHTVDRDRPTASAVAVRDGRFVAVGDDATAMAQRGPATRVIDLRGRTVIPGLNDSHLHLIRGGLNYNLE
LHWEGVPSLADALRMLREQAARTPSPQWVRVVGGWTEFQFAERRMPTLDELNQAAPDTPVFVLHLYDRALLNRAALRQVG
YTRDTPNPPGGEIQRDAGGEPTGMLIARPNAMILYATLAKGPKLPPEYQVNSTRQFMRELNRLGVTSAIDAGGGFQNYPE
DYTVIRQLAQENQLTVRIAYNLFTQKPKEELADFKHWTGSVPYRQGDDFLRHNGAGEMLVFSAADFEDFLQPRPDLPETM
EPELEGVVRHLVAQRWPFRLHATYDESISRMLDVFERVDREIPFDGLPWFFDHAETISPKNIERVRALGGGIAIQDRMAF
QGEYFVERYGAAAAGQTPPIQRMLAEGVPVGAGTDATRVSSYNPWTSLYWLVSGRTVGGLPLYPQGLPRDVALALYTHGS
AWFSADQGNKGQIKVGQLADLAALSADFFSVDEAGIKAIESVLTVVDGRVVYGAAEFTEYGPPPIPVLPEWSPVARVPGH
WRPAAPLQRQVHHCAGACGVHGHAHQKARTANVPAADFRAFWGAFGCSCFAF

Sequences:

>Translated_612_residues
MTADLILHNGRIHTVDRDRPTASAVAVRDGRFVAVGDDATAMAQRGPATRVIDLRGRTVIPGLNDSHLHLIRGGLNYNLE
LHWEGVPSLADALRMLREQAARTPSPQWVRVVGGWTEFQFAERRMPTLDELNQAAPDTPVFVLHLYDRALLNRAALRQVG
YTRDTPNPPGGEIQRDAGGEPTGMLIARPNAMILYATLAKGPKLPPEYQVNSTRQFMRELNRLGVTSAIDAGGGFQNYPE
DYTVIRQLAQENQLTVRIAYNLFTQKPKEELADFKHWTGSVPYRQGDDFLRHNGAGEMLVFSAADFEDFLQPRPDLPETM
EPELEGVVRHLVAQRWPFRLHATYDESISRMLDVFERVDREIPFDGLPWFFDHAETISPKNIERVRALGGGIAIQDRMAF
QGEYFVERYGAAAAGQTPPIQRMLAEGVPVGAGTDATRVSSYNPWTSLYWLVSGRTVGGLPLYPQGLPRDVALALYTHGS
AWFSADQGNKGQIKVGQLADLAALSADFFSVDEAGIKAIESVLTVVDGRVVYGAAEFTEYGPPPIPVLPEWSPVARVPGH
WRPAAPLQRQVHHCAGACGVHGHAHQKARTANVPAADFRAFWGAFGCSCFAF
>Mature_611_residues
TADLILHNGRIHTVDRDRPTASAVAVRDGRFVAVGDDATAMAQRGPATRVIDLRGRTVIPGLNDSHLHLIRGGLNYNLEL
HWEGVPSLADALRMLREQAARTPSPQWVRVVGGWTEFQFAERRMPTLDELNQAAPDTPVFVLHLYDRALLNRAALRQVGY
TRDTPNPPGGEIQRDAGGEPTGMLIARPNAMILYATLAKGPKLPPEYQVNSTRQFMRELNRLGVTSAIDAGGGFQNYPED
YTVIRQLAQENQLTVRIAYNLFTQKPKEELADFKHWTGSVPYRQGDDFLRHNGAGEMLVFSAADFEDFLQPRPDLPETME
PELEGVVRHLVAQRWPFRLHATYDESISRMLDVFERVDREIPFDGLPWFFDHAETISPKNIERVRALGGGIAIQDRMAFQ
GEYFVERYGAAAAGQTPPIQRMLAEGVPVGAGTDATRVSSYNPWTSLYWLVSGRTVGGLPLYPQGLPRDVALALYTHGSA
WFSADQGNKGQIKVGQLADLAALSADFFSVDEAGIKAIESVLTVVDGRVVYGAAEFTEYGPPPIPVLPEWSPVARVPGHW
RPAAPLQRQVHHCAGACGVHGHAHQKARTANVPAADFRAFWGAFGCSCFAF

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 67585; Mature: 67454

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTADLILHNGRIHTVDRDRPTASAVAVRDGRFVAVGDDATAMAQRGPATRVIDLRGRTVI
CCCCEEEECCEEEEECCCCCCCCEEEEECCEEEEECCCHHHHHHCCCCCEEEEECCCEEC
PGLNDSHLHLIRGGLNYNLELHWEGVPSLADALRMLREQAARTPSPQWVRVVGGWTEFQF
CCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
AERRMPTLDELNQAAPDTPVFVLHLYDRALLNRAALRQVGYTRDTPNPPGGEIQRDAGGE
HHHCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PTGMLIARPNAMILYATLAKGPKLPPEYQVNSTRQFMRELNRLGVTSAIDAGGGFQNYPE
CCEEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCH
DYTVIRQLAQENQLTVRIAYNLFTQKPKEELADFKHWTGSVPYRQGDDFLRHNGAGEMLV
HHHHHHHHHHCCCEEEEEEEEHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEE
FSAADFEDFLQPRPDLPETMEPELEGVVRHLVAQRWPFRLHATYDESISRMLDVFERVDR
EECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH
EIPFDGLPWFFDHAETISPKNIERVRALGGGIAIQDRMAFQGEYFVERYGAAAAGQTPPI
CCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCEEEECHHHHCCHHHHHHHCCCCCCCCCHH
QRMLAEGVPVGAGTDATRVSSYNPWTSLYWLVSGRTVGGLPLYPQGLPRDVALALYTHGS
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCEEEEEEECCC
AWFSADQGNKGQIKVGQLADLAALSADFFSVDEAGIKAIESVLTVVDGRVVYGAAEFTEY
EEEECCCCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEHHHHCC
GPPPIPVLPEWSPVARVPGHWRPAAPLQRQVHHCAGACGVHGHAHQKARTANVPAADFRA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH
FWGAFGCSCFAF
HHHHHCCCEECC
>Mature Secondary Structure 
TADLILHNGRIHTVDRDRPTASAVAVRDGRFVAVGDDATAMAQRGPATRVIDLRGRTVI
CCCEEEECCEEEEECCCCCCCCEEEEECCEEEEECCCHHHHHHCCCCCEEEEECCCEEC
PGLNDSHLHLIRGGLNYNLELHWEGVPSLADALRMLREQAARTPSPQWVRVVGGWTEFQF
CCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHH
AERRMPTLDELNQAAPDTPVFVLHLYDRALLNRAALRQVGYTRDTPNPPGGEIQRDAGGE
HHHCCCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PTGMLIARPNAMILYATLAKGPKLPPEYQVNSTRQFMRELNRLGVTSAIDAGGGFQNYPE
CCEEEEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCCCCCCCH
DYTVIRQLAQENQLTVRIAYNLFTQKPKEELADFKHWTGSVPYRQGDDFLRHNGAGEMLV
HHHHHHHHHHCCCEEEEEEEEHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEE
FSAADFEDFLQPRPDLPETMEPELEGVVRHLVAQRWPFRLHATYDESISRMLDVFERVDR
EECCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH
EIPFDGLPWFFDHAETISPKNIERVRALGGGIAIQDRMAFQGEYFVERYGAAAAGQTPPI
CCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCEEEECHHHHCCHHHHHHHCCCCCCCCCHH
QRMLAEGVPVGAGTDATRVSSYNPWTSLYWLVSGRTVGGLPLYPQGLPRDVALALYTHGS
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCCCCCCCCCEEEEEEECCC
AWFSADQGNKGQIKVGQLADLAALSADFFSVDEAGIKAIESVLTVVDGRVVYGAAEFTEY
EEEECCCCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEHHHHCC
GPPPIPVLPEWSPVARVPGHWRPAAPLQRQVHHCAGACGVHGHAHQKARTANVPAADFRA
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHH
FWGAFGCSCFAF
HHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]