Click here to switch to the map view.

The map label for this gene is 17544930

Identifier: 17544930

GI number: 17544930

Start: 234107

End: 234688

Strand: Reverse

Name: 17544930

Synonym: RSc0211

Alternate gene names: NA

Gene position: 234688-234107 (Counterclockwise)

Preceding gene: 17544931

Following gene: 17544928

Centisome position: 6.31

GC content: 67.01

Gene sequence:

>582_bases
ATGAAGCTCAACCGGATTCTGCTGATCACCAGTGCTGTTGCATTGGTTGCGTTGCCCATGGCGACGCTGGCTTTCATCAA
GCCGCTGCGAGTCATTGCGCCGTCGCTCGTGCCGGGCATCGCCTGCCCGCGCCCCGGCATCTGCACCGATGACGCTGCCC
GCCTGAGCGATGCCGAACGTCTGTACCAGGAGGGCTACGCCAAGGCCGTCGATGCGGTCGGGCCGTTCAGCCACACACCG
CGCATGGTGTTCTGCACGACGCCCGCATGTGCCGATGCGTTCGGCATCGGGCGGCGCGCGGCGGAAGCCGTGGGCAATCT
GGGCCTCGTGGTCGCGCCGCGCGGGTGGACGTCCTTCTATGTGGCACACGAGCTGATCCACTACCGACAGGCGGAATCGC
TGGGCAATCTCGCCGTGGCGACCAAGCCCGAGTGGCTGATCGAGGGCATGGCCTATGCGCTGAGTGGCGACCCGAGGCAT
CCCCTGGGCGAGCCCTTCGAACAATGGCGATCGCGCTTTGAAGCATGGCACGCGGGGCTCGGGGCACGCGGCTTATGGGA
AGCGGCGCGGGAGGTCCGCTGA

Upstream 100 bases:

>100_bases
TCACGCCGCGTTGTACGATGTGGAGACCACACCGCTTGCCGTTCGAATCCAATCCCCCTTCCGCCGTATCGCTTGCAGTC
GATCACATCAACGCGAACCC

Downstream 100 bases:

>100_bases
GCCGAATCCCTTCTCGCGCGCAGTACGAGCGGCCACAACCCATCCCCCACAGCAACTGGCATGCGCATCAATTGAGACAA
GGGCATCGACCTGACCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKLNRILLITSAVALVALPMATLAFIKPLRVIAPSLVPGIACPRPGICTDDAARLSDAERLYQEGYAKAVDAVGPFSHTP
RMVFCTTPACADAFGIGRRAAEAVGNLGLVVAPRGWTSFYVAHELIHYRQAESLGNLAVATKPEWLIEGMAYALSGDPRH
PLGEPFEQWRSRFEAWHAGLGARGLWEAAREVR

Sequences:

>Translated_193_residues
MKLNRILLITSAVALVALPMATLAFIKPLRVIAPSLVPGIACPRPGICTDDAARLSDAERLYQEGYAKAVDAVGPFSHTP
RMVFCTTPACADAFGIGRRAAEAVGNLGLVVAPRGWTSFYVAHELIHYRQAESLGNLAVATKPEWLIEGMAYALSGDPRH
PLGEPFEQWRSRFEAWHAGLGARGLWEAAREVR
>Mature_193_residues
MKLNRILLITSAVALVALPMATLAFIKPLRVIAPSLVPGIACPRPGICTDDAARLSDAERLYQEGYAKAVDAVGPFSHTP
RMVFCTTPACADAFGIGRRAAEAVGNLGLVVAPRGWTSFYVAHELIHYRQAESLGNLAVATKPEWLIEGMAYALSGDPRH
PLGEPFEQWRSRFEAWHAGLGARGLWEAAREVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20948; Mature: 20948

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNRILLITSAVALVALPMATLAFIKPLRVIAPSLVPGIACPRPGICTDDAARLSDAER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LYQEGYAKAVDAVGPFSHTPRMVFCTTPACADAFGIGRRAAEAVGNLGLVVAPRGWTSFY
HHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH
VAHELIHYRQAESLGNLAVATKPEWLIEGMAYALSGDPRHPLGEPFEQWRSRFEAWHAGL
HHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
GARGLWEAAREVR
CCHHHHHHHHHCC
>Mature Secondary Structure
MKLNRILLITSAVALVALPMATLAFIKPLRVIAPSLVPGIACPRPGICTDDAARLSDAER
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LYQEGYAKAVDAVGPFSHTPRMVFCTTPACADAFGIGRRAAEAVGNLGLVVAPRGWTSFY
HHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH
VAHELIHYRQAESLGNLAVATKPEWLIEGMAYALSGDPRHPLGEPFEQWRSRFEAWHAGL
HHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
GARGLWEAAREVR
CCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA