| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is prs [H]
Identifier: 17544921
GI number: 17544921
Start: 224606
End: 225568
Strand: Direct
Name: prs [H]
Synonym: RSc0202
Alternate gene names: 17544921
Gene position: 224606-225568 (Clockwise)
Preceding gene: 17544920
Following gene: 17544922
Centisome position: 6.04
GC content: 62.62
Gene sequence:
>963_bases ATGGGCCCCCTGACGCCAGCTTGCACGGTCAACGGCAACGCACAAAGGCGCGTCGTCCTTGCCTTGCCAGGCAACCAGGC TGCAGCCGCAAGACTGGCAGCGCCACTGGCTGCCGAGATCGGGCAAGCCGAGATGAAGCGTTTTCCAGATGGTGAATTCC ACGTGCGGTTGCAAACGCCGGTGTGCGACGCCGAGGTCGCCATCGTCTGCACGCTAGACCGGCCAGACGAGAAGGTCTTG CCGCTGCTGTGGCTTGCCATTGCAGCTCATCAAGGTGGGGCGCGCCGCGTTGGGCTGGTCGCACCTTACCTGGCCTATAT GCGGCAGGACGCCATTTTTCAGTCGGGCGAGATATGTGCAGCACGTCACTTTGCTGAGCTGCTGACGCGGTACTTCGATT GGCTGGTTGCAGTCGATCCGCACCTGCATCGCATTCCGGAACTGTCGGACATCTATGGCATGCCAGTAACCGTTGCACAG GCGGCTCCGGCCATGGCTGCTTGGGTGCGGGCCCATGTCAGCGATCCGCTGTTTATCGGCCCTGATGACGAAAGCCGGCA GTGGGTCGAGCACGTGGCAGGCCTGTGCAGCGCCCCCTGGACTGTCCTGAGCAAGACACGCTACAGCGCGTGGGACGTGG CGGTGTCGGCTATCGGATCCAATCCGCGCTCGCAGCACACGCCCGTCTTGATCGACGACATCATTTCCACCGGGCGAACC CTAATCGCGGCAGCTCACCAGTTGCATAGTGCGGGGCTGCGACGTCCATTGTGCGTGGCGGTCCATGCCGTGTTTGCCAC CGACGCCTACAGCGAACTGAGTGCCGTGGCCGCCGACGTGATCACCTGCGACACCATCGCTCACCCGTCCAACCGCATTG CGCTGTCGGAACCCGTTGCAGCTGCGATTTCGACCATGTTTGATCTACCTCTGCCCGCGGCTATTCAGCGCCTTGCTCGG TAA
Upstream 100 bases:
>100_bases AACCGGCGGCCAGCGACGCCTTGCGCCAGCGCATCGAACGCGAGTTGCAGTGGCCGGTGCGCATGCCTGAGTACCGGCAG TCCTATGCGCTGAGCTGAGC
Downstream 100 bases:
>100_bases CGGCTGGATTTCTACGCTGACGATGGCAAGACCCCAACCCGAGAGACGCATCATGAAACAGATCGAGTTTCCAACCGGTG AACCAACCTATTGCGCGACT
Product: phosphoribosylpyrophosphate synthetase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MGPLTPACTVNGNAQRRVVLALPGNQAAAARLAAPLAAEIGQAEMKRFPDGEFHVRLQTPVCDAEVAIVCTLDRPDEKVL PLLWLAIAAHQGGARRVGLVAPYLAYMRQDAIFQSGEICAARHFAELLTRYFDWLVAVDPHLHRIPELSDIYGMPVTVAQ AAPAMAAWVRAHVSDPLFIGPDDESRQWVEHVAGLCSAPWTVLSKTRYSAWDVAVSAIGSNPRSQHTPVLIDDIISTGRT LIAAAHQLHSAGLRRPLCVAVHAVFATDAYSELSAVAADVITCDTIAHPSNRIALSEPVAAAISTMFDLPLPAAIQRLAR
Sequences:
>Translated_320_residues MGPLTPACTVNGNAQRRVVLALPGNQAAAARLAAPLAAEIGQAEMKRFPDGEFHVRLQTPVCDAEVAIVCTLDRPDEKVL PLLWLAIAAHQGGARRVGLVAPYLAYMRQDAIFQSGEICAARHFAELLTRYFDWLVAVDPHLHRIPELSDIYGMPVTVAQ AAPAMAAWVRAHVSDPLFIGPDDESRQWVEHVAGLCSAPWTVLSKTRYSAWDVAVSAIGSNPRSQHTPVLIDDIISTGRT LIAAAHQLHSAGLRRPLCVAVHAVFATDAYSELSAVAADVITCDTIAHPSNRIALSEPVAAAISTMFDLPLPAAIQRLAR >Mature_319_residues GPLTPACTVNGNAQRRVVLALPGNQAAAARLAAPLAAEIGQAEMKRFPDGEFHVRLQTPVCDAEVAIVCTLDRPDEKVLP LLWLAIAAHQGGARRVGLVAPYLAYMRQDAIFQSGEICAARHFAELLTRYFDWLVAVDPHLHRIPELSDIYGMPVTVAQA APAMAAWVRAHVSDPLFIGPDDESRQWVEHVAGLCSAPWTVLSKTRYSAWDVAVSAIGSNPRSQHTPVLIDDIISTGRTL IAAAHQLHSAGLRRPLCVAVHAVFATDAYSELSAVAADVITCDTIAHPSNRIALSEPVAAAISTMFDLPLPAAIQRLAR
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=275, Percent_Identity=25.0909090909091, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI84875539, Length=278, Percent_Identity=25.1798561151079, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI4506127, Length=274, Percent_Identity=25.5474452554745, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI28557709, Length=276, Percent_Identity=25.7246376811594, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1787458, Length=264, Percent_Identity=28.030303030303, Blast_Score=91, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25149168, Length=296, Percent_Identity=24.6621621621622, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17554704, Length=296, Percent_Identity=24.6621621621622, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17554702, Length=296, Percent_Identity=24.6621621621622, Blast_Score=72, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71989924, Length=296, Percent_Identity=24.6621621621622, Blast_Score=71, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6321776, Length=260, Percent_Identity=23.4615384615385, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6319403, Length=262, Percent_Identity=22.9007633587786, Blast_Score=66, Evalue=9e-12, Organism=Drosophila melanogaster, GI21355239, Length=264, Percent_Identity=25, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI45551540, Length=290, Percent_Identity=22.7586206896552, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34384; Mature: 34253
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGPLTPACTVNGNAQRRVVLALPGNQAAAARLAAPLAAEIGQAEMKRFPDGEFHVRLQTP CCCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEECC VCDAEVAIVCTLDRPDEKVLPLLWLAIAAHQGGARRVGLVAPYLAYMRQDAIFQSGEICA CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH ARHFAELLTRYFDWLVAVDPHLHRIPELSDIYGMPVTVAQAAPAMAAWVRAHVSDPLFIG HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEC PDDESRQWVEHVAGLCSAPWTVLSKTRYSAWDVAVSAIGSNPRSQHTPVLIDDIISTGRT CCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHH LIAAAHQLHSAGLRRPLCVAVHAVFATDAYSELSAVAADVITCDTIAHPSNRIALSEPVA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHH AAISTMFDLPLPAAIQRLAR HHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure GPLTPACTVNGNAQRRVVLALPGNQAAAARLAAPLAAEIGQAEMKRFPDGEFHVRLQTP CCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEECC VCDAEVAIVCTLDRPDEKVLPLLWLAIAAHQGGARRVGLVAPYLAYMRQDAIFQSGEICA CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH ARHFAELLTRYFDWLVAVDPHLHRIPELSDIYGMPVTVAQAAPAMAAWVRAHVSDPLFIG HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEC PDDESRQWVEHVAGLCSAPWTVLSKTRYSAWDVAVSAIGSNPRSQHTPVLIDDIISTGRT CCCCHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHH LIAAAHQLHSAGLRRPLCVAVHAVFATDAYSELSAVAADVITCDTIAHPSNRIALSEPVA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHH AAISTMFDLPLPAAIQRLAR HHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]