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The map label for this gene is 17544892

Identifier: 17544892

GI number: 17544892

Start: 194451

End: 195875

Strand: Reverse

Name: 17544892

Synonym: RSc0173

Alternate gene names: NA

Gene position: 195875-194451 (Counterclockwise)

Preceding gene: 17544893

Following gene: 17544891

Centisome position: 5.27

GC content: 64.98

Gene sequence:

>1425_bases
ATGTGCAGCAAACCCCTGGTTGTCGACCTTGATGGCACGTTAATTCGTTCGGACATCTTGATCGAATCCGGTTTCGCATA
CCTGAAATCGGCGCCACACCGGTTTTACGAGCCACTGCTGTGGCTGGCGCGCGGCGGCAAGCCTGTCTTGAAAGCGCGCC
TGGCGCAGGCGACCGATCTCGACGTTACCGTTCTGCCTTACGACCACGCCGTTCTCGAGTGGCTTCACACCGAGCGCGCC
TCCGGCCGCACGCTGGTGCTTGCCACGGCCAGCCACGTGCGCTACGCCGAGGCGATTTCCGCGCACCTGGGGCTCTTCGA
CAAGACGTTCGCCACCGACGGCAGCACCAATCTGTCCGCCCGCAACAAGCGAGACCGGCTCGTGGCCGAGTATGGCGAAA
AGGGCTTCGACTACGCGGGCAACTCCCACGACGATGTCATCGTGTGGCAGGCGGCCGAACGCGCCTACGTGGTGAATCCC
CATGGCGGCGTGGAGCGCGCGGCACGCAAGATCGGCAATGTCGAGCGCGTGATCGATGCACGCCCGGCGCCCCTGAAAAT
CTGGAGCAAGTCGCTGCGGCTGCATCAGTGGCTGAAGAATCTGCTCATCTTCGTGCCGTTGCTGGCCGGTCACCTGCTGG
GCTCGCCCGAACAGGTGCTCGCGGCGCTGCTGGCGTTCCTGACGTTCGGCCTGTGCGCGTCGAGCGTCTACCTGCTCAAT
GACCTGCTCGATCTCGAAGACGATCGCCATCACCCCGTCAAGCGCAAGCGGCCGTTTGCTTCCGGCGCGCTTCCGCTGCT
GTGGGGCGGGGGGATGTTCCCGGTCCTGCTTGTCACGGCGTTCCTGCTGGCCTGGCTGTGCCTGCCATGGCGGTTCGCGG
CCGTGCTGCTGGGCTACTACGCGCTGACGCTCGCCTACTCGGCGTTCCTGAAGCGCCGCGTGATGATCGATGTCGTCGTG
CTCGCCACGCTCTACACCATGCGCATCATCGCCGGCGCGGCCGCCGTGGGCGCGCACCTGACCTTCTGGCTGCTCGCCTT
CTCGATGTTCATTTTCCTGAGCCTGGCACTCGTCAAGCGCTATGCGGAACTGCATGCCATCAAAGCACGCGGACTCGTCA
AGACACGCGGCCGCGGCTACGAGGCAAGCGATCTGCCGATGCTGTCGTCACTCGGCTCGGCGGCGGGCTACCTGGCCGTG
CTCGTGCTCGCGCTGTATATCCAGGACGCCAAGACGGCGAGCCTCTACCGGCATCCGCAGGCGATCTGGCTCGCCTGTCC
GCTGATGCTGTACTGGGTCAGCCGGACCTGGATCATCACACACCGCGGCCAGATGCACGACGACCCCATCGTGTTCGCCG
TACGCGACCGGGTGAGCCTCGCCGTCGTGGCACTGTGCGGCTTTATCTTCTGGGCGGCGATCTGA

Upstream 100 bases:

>100_bases
CCCCCAGCCTGGGCATGCGCCCCGCTCCGGCAACCTCGCACCTCGCGGCACACGCGCCCACACCCATATCGCCAATATCG
GCCCGCCCGAATCCACCCGC

Downstream 100 bases:

>100_bases
ACAATGGGAACCGTTCAGTCGTGGGGGCGCTACCCATACGAACCGCAGCAAGCGCACGCGGTCGCGTGGCGCGATGCCCT
GGATACGACCTGGCTTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MCSKPLVVDLDGTLIRSDILIESGFAYLKSAPHRFYEPLLWLARGGKPVLKARLAQATDLDVTVLPYDHAVLEWLHTERA
SGRTLVLATASHVRYAEAISAHLGLFDKTFATDGSTNLSARNKRDRLVAEYGEKGFDYAGNSHDDVIVWQAAERAYVVNP
HGGVERAARKIGNVERVIDARPAPLKIWSKSLRLHQWLKNLLIFVPLLAGHLLGSPEQVLAALLAFLTFGLCASSVYLLN
DLLDLEDDRHHPVKRKRPFASGALPLLWGGGMFPVLLVTAFLLAWLCLPWRFAAVLLGYYALTLAYSAFLKRRVMIDVVV
LATLYTMRIIAGAAAVGAHLTFWLLAFSMFIFLSLALVKRYAELHAIKARGLVKTRGRGYEASDLPMLSSLGSAAGYLAV
LVLALYIQDAKTASLYRHPQAIWLACPLMLYWVSRTWIITHRGQMHDDPIVFAVRDRVSLAVVALCGFIFWAAI

Sequences:

>Translated_474_residues
MCSKPLVVDLDGTLIRSDILIESGFAYLKSAPHRFYEPLLWLARGGKPVLKARLAQATDLDVTVLPYDHAVLEWLHTERA
SGRTLVLATASHVRYAEAISAHLGLFDKTFATDGSTNLSARNKRDRLVAEYGEKGFDYAGNSHDDVIVWQAAERAYVVNP
HGGVERAARKIGNVERVIDARPAPLKIWSKSLRLHQWLKNLLIFVPLLAGHLLGSPEQVLAALLAFLTFGLCASSVYLLN
DLLDLEDDRHHPVKRKRPFASGALPLLWGGGMFPVLLVTAFLLAWLCLPWRFAAVLLGYYALTLAYSAFLKRRVMIDVVV
LATLYTMRIIAGAAAVGAHLTFWLLAFSMFIFLSLALVKRYAELHAIKARGLVKTRGRGYEASDLPMLSSLGSAAGYLAV
LVLALYIQDAKTASLYRHPQAIWLACPLMLYWVSRTWIITHRGQMHDDPIVFAVRDRVSLAVVALCGFIFWAAI
>Mature_474_residues
MCSKPLVVDLDGTLIRSDILIESGFAYLKSAPHRFYEPLLWLARGGKPVLKARLAQATDLDVTVLPYDHAVLEWLHTERA
SGRTLVLATASHVRYAEAISAHLGLFDKTFATDGSTNLSARNKRDRLVAEYGEKGFDYAGNSHDDVIVWQAAERAYVVNP
HGGVERAARKIGNVERVIDARPAPLKIWSKSLRLHQWLKNLLIFVPLLAGHLLGSPEQVLAALLAFLTFGLCASSVYLLN
DLLDLEDDRHHPVKRKRPFASGALPLLWGGGMFPVLLVTAFLLAWLCLPWRFAAVLLGYYALTLAYSAFLKRRVMIDVVV
LATLYTMRIIAGAAAVGAHLTFWLLAFSMFIFLSLALVKRYAELHAIKARGLVKTRGRGYEASDLPMLSSLGSAAGYLAV
LVLALYIQDAKTASLYRHPQAIWLACPLMLYWVSRTWIITHRGQMHDDPIVFAVRDRVSLAVVALCGFIFWAAI

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 52611; Mature: 52611

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSKPLVVDLDGTLIRSDILIESGFAYLKSAPHRFYEPLLWLARGGKPVLKARLAQATDL
CCCCCEEEECCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DVTVLPYDHAVLEWLHTERASGRTLVLATASHVRYAEAISAHLGLFDKTFATDGSTNLSA
CEEEECCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCC
RNKRDRLVAEYGEKGFDYAGNSHDDVIVWQAAERAYVVNPHGGVERAARKIGNVERVIDA
CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCHHHHHCC
RPAPLKIWSKSLRLHQWLKNLLIFVPLLAGHLLGSPEQVLAALLAFLTFGLCASSVYLLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DLLDLEDDRHHPVKRKRPFASGALPLLWGGGMFPVLLVTAFLLAWLCLPWRFAAVLLGYY
HHHCCCCCCCCCCHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTLAYSAFLKRRVMIDVVVLATLYTMRIIAGAAAVGAHLTFWLLAFSMFIFLSLALVKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAELHAIKARGLVKTRGRGYEASDLPMLSSLGSAAGYLAVLVLALYIQDAKTASLYRHPQ
HHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCH
AIWLACPLMLYWVSRTWIITHRGQMHDDPIVFAVRDRVSLAVVALCGFIFWAAI
HHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCSKPLVVDLDGTLIRSDILIESGFAYLKSAPHRFYEPLLWLARGGKPVLKARLAQATDL
CCCCCEEEECCCCCHHHHHHHHHCHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC
DVTVLPYDHAVLEWLHTERASGRTLVLATASHVRYAEAISAHLGLFDKTFATDGSTNLSA
CEEEECCHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCC
RNKRDRLVAEYGEKGFDYAGNSHDDVIVWQAAERAYVVNPHGGVERAARKIGNVERVIDA
CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHCCHHHHHCC
RPAPLKIWSKSLRLHQWLKNLLIFVPLLAGHLLGSPEQVLAALLAFLTFGLCASSVYLLN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DLLDLEDDRHHPVKRKRPFASGALPLLWGGGMFPVLLVTAFLLAWLCLPWRFAAVLLGYY
HHHCCCCCCCCCCHHCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTLAYSAFLKRRVMIDVVVLATLYTMRIIAGAAAVGAHLTFWLLAFSMFIFLSLALVKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAELHAIKARGLVKTRGRGYEASDLPMLSSLGSAAGYLAVLVLALYIQDAKTASLYRHPQ
HHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCH
AIWLACPLMLYWVSRTWIITHRGQMHDDPIVFAVRDRVSLAVVALCGFIFWAAI
HHHHHHHHHHHHHHCEEEEEECCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]