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The map label for this gene is 17544886

Identifier: 17544886

GI number: 17544886

Start: 187938

End: 188363

Strand: Reverse

Name: 17544886

Synonym: RSc0167

Alternate gene names: NA

Gene position: 188363-187938 (Counterclockwise)

Preceding gene: 17544887

Following gene: 17544880

Centisome position: 5.07

GC content: 63.62

Gene sequence:

>426_bases
GTGACGCGCGCGTCGGCTGCCGTCAAGCCGATCTTCCTGTCGAGGCATTTCCTGCTGTTCCTGCTGACCGGCGGCATCGC
CGCCGCGGTCAACTGGGGGAGCCGGATCGCCTACAACCTCTGGATGCCCTACTCCGCCGCGATCGTCGTCGCCTATGTCA
CGGGGATGATCACGGCGTTCGTTTTGGCGAAGCTGTTCGTCTTTACCGAGAGCACGCAGTCCACCGCGCGATCGATCGTC
TTCTTCACGCTGGTGAACCTGGTGGCCGTGCTGCAGACCTGGGGCGTGAGCGTCGGCCTCGCTTACTACGTGTTTCCCCG
GCTGGGCCTGGATTGGCATGCGCGGGAAATCGCACACCTCGTCGGTGTGGCGGTGCCCGTGTTCACGAGCTACATCGGGC
ACAAGCGATGGAGCTTCAAGCACTAG

Upstream 100 bases:

>100_bases
CGATCAAGGGTCTGCTGGTTGCCGACACGTCGTACTACTATCCGGAGGACCGGGGCATCTCGGAGAGCATCGGACTGTCG
CGCAAGATGGCGAGGATGCT

Downstream 100 bases:

>100_bases
GCTCAAACGGAGCCTGTGACGGGTCCCAACGGGCTGCCACGCCGATGTGACGGGCGCCCCCGCTGGCGCGCCCGGCAACC
GCTACCAGCCGCCCCCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: GtrA-Like Protein

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MTRASAAVKPIFLSRHFLLFLLTGGIAAAVNWGSRIAYNLWMPYSAAIVVAYVTGMITAFVLAKLFVFTESTQSTARSIV
FFTLVNLVAVLQTWGVSVGLAYYVFPRLGLDWHAREIAHLVGVAVPVFTSYIGHKRWSFKH

Sequences:

>Translated_141_residues
MTRASAAVKPIFLSRHFLLFLLTGGIAAAVNWGSRIAYNLWMPYSAAIVVAYVTGMITAFVLAKLFVFTESTQSTARSIV
FFTLVNLVAVLQTWGVSVGLAYYVFPRLGLDWHAREIAHLVGVAVPVFTSYIGHKRWSFKH
>Mature_140_residues
TRASAAVKPIFLSRHFLLFLLTGGIAAAVNWGSRIAYNLWMPYSAAIVVAYVTGMITAFVLAKLFVFTESTQSTARSIVF
FTLVNLVAVLQTWGVSVGLAYYVFPRLGLDWHAREIAHLVGVAVPVFTSYIGHKRWSFKH

Specific function: Unknown

COG id: COG2246

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15655; Mature: 15523

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRASAAVKPIFLSRHFLLFLLTGGIAAAVNWGSRIAYNLWMPYSAAIVVAYVTGMITAF
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
VLAKLFVFTESTQSTARSIVFFTLVNLVAVLQTWGVSVGLAYYVFPRLGLDWHAREIAHL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHH
VGVAVPVFTSYIGHKRWSFKH
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TRASAAVKPIFLSRHFLLFLLTGGIAAAVNWGSRIAYNLWMPYSAAIVVAYVTGMITAF
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
VLAKLFVFTESTQSTARSIVFFTLVNLVAVLQTWGVSVGLAYYVFPRLGLDWHAREIAHL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHH
VGVAVPVFTSYIGHKRWSFKH
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA