| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is yhiI [C]
Identifier: 17544882
GI number: 17544882
Start: 183367
End: 184302
Strand: Direct
Name: yhiI [C]
Synonym: RSc0163
Alternate gene names: 17544882
Gene position: 183367-184302 (Clockwise)
Preceding gene: 17544881
Following gene: 17544883
Centisome position: 4.93
GC content: 72.44
Gene sequence:
>936_bases ATGGCAGCGGTGGCGATGGCAGCGGCGGTGACCGGTTGCGGCAACCCGGACACCCAGTCCTACCAGGGCTACGTGGAAGG CGAGTTCGTCTATGTCGCCTCGCCGGTGGGCGGGCGGCTGGAGCACCTGGGTGTGCAGCGCGGCCAGACGGTGAGCGCCG GCACGCCGTTGTTCATACTGGAATCCACCGATGAAGCGGCCGCGCGCCAGCAGGCCGCTGCCCAGCAGCAGGCCGCCGAG GCACAGCTGGCCGACCTGAACCTCGGTCGCCGGGTCCCGGAGGTCGATGCGGTGCGTGCGCAGCTGGCGCAGGCGGTGGC GGCCGACCAGCTCTCGGCCACGCAGCGGGTGCGAGACGAGGCCCAGTTCCGCGCCGGCGGCATCCCGCAAGCGCAGCTCG ATGCCAGCCGTTCGACCGCGCAGACCAACGCCCAGCGCGTGCGCGAGCTGACCAACCAGCTGCGCATCGCCCAGCTGCCG GCGCGCACCGACCAGATCCATGCGCAGTCGGCGCAGGTCGAGGCGGCGCGCGCCGCCGTCGCGCAGGCCCAGTGGCGGCT CGACCAGAAGGCGCAGAAGGCCACGCAGGGCGGCCTGGTGTTCGACACGCTGTATCGCGAAGGCGAATGGGTCGGAGCCG GCAGCCCCGTGGTGCGCATGCTGCCGCCGGCCAACGTGAAGGTGCGCTTCTTCGTGCCGGAAGGCGTGGTGGGGCGCCTC AAGCCGGGGCAGGCCGTGCGCATCCGCTGCGACGGCTGCGCCGCCGAGGTGAACGCCACCATCAGCTACGTCGCCAGCGA GGCCGAGTACACCCCGCCCGTGATCTACAGCAACAGCCGGCGCGACAAGCTCGTCTTCATGGTGGAGGCGCGGCCGGCCG CCGCGGATGGCCCCAAACTGCGCCCAGGCCAGCCCGTCGAGGTGGCGCTGCCATGA
Upstream 100 bases:
>100_bases AAGGCAGGGCGCAAGGCACGGCGGCAGCAGGCGGATCAATCTAACCGGTGAAGTGGAGGACGGCATGCGTCCAGCGAACG GAATCGACAGGGCGGGGTGG
Downstream 100 bases:
>100_bases ACGCGCCGGCCGCCCGTCCCGCCGGCAGCGATGGCGCCTACGCCATCGACGTGCACGGCCTGAACAAGCACTTCGGCGAC AAGCACGTCGTGCGCGATCT
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAAVAMAAAVTGCGNPDTQSYQGYVEGEFVYVASPVGGRLEHLGVQRGQTVSAGTPLFILESTDEAAARQQAAAQQQAAE AQLADLNLGRRVPEVDAVRAQLAQAVAADQLSATQRVRDEAQFRAGGIPQAQLDASRSTAQTNAQRVRELTNQLRIAQLP ARTDQIHAQSAQVEAARAAVAQAQWRLDQKAQKATQGGLVFDTLYREGEWVGAGSPVVRMLPPANVKVRFFVPEGVVGRL KPGQAVRIRCDGCAAEVNATISYVASEAEYTPPVIYSNSRRDKLVFMVEARPAAADGPKLRPGQPVEVALP
Sequences:
>Translated_311_residues MAAVAMAAAVTGCGNPDTQSYQGYVEGEFVYVASPVGGRLEHLGVQRGQTVSAGTPLFILESTDEAAARQQAAAQQQAAE AQLADLNLGRRVPEVDAVRAQLAQAVAADQLSATQRVRDEAQFRAGGIPQAQLDASRSTAQTNAQRVRELTNQLRIAQLP ARTDQIHAQSAQVEAARAAVAQAQWRLDQKAQKATQGGLVFDTLYREGEWVGAGSPVVRMLPPANVKVRFFVPEGVVGRL KPGQAVRIRCDGCAAEVNATISYVASEAEYTPPVIYSNSRRDKLVFMVEARPAAADGPKLRPGQPVEVALP >Mature_310_residues AAVAMAAAVTGCGNPDTQSYQGYVEGEFVYVASPVGGRLEHLGVQRGQTVSAGTPLFILESTDEAAARQQAAAQQQAAEA QLADLNLGRRVPEVDAVRAQLAQAVAADQLSATQRVRDEAQFRAGGIPQAQLDASRSTAQTNAQRVRELTNQLRIAQLPA RTDQIHAQSAQVEAARAAVAQAQWRLDQKAQKATQGGLVFDTLYREGEWVGAGSPVVRMLPPANVKVRFFVPEGVVGRLK PGQAVRIRCDGCAAEVNATISYVASEAEYTPPVIYSNSRRDKLVFMVEARPAAADGPKLRPGQPVEVALP
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1789900, Length=275, Percent_Identity=30.1818181818182, Blast_Score=78, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 33121; Mature: 32989
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAVAMAAAVTGCGNPDTQSYQGYVEGEFVYVASPVGGRLEHLGVQRGQTVSAGTPLFIL CCHHHHHHHHHCCCCCCCCCCCCEECCEEEEEECCCCCHHHHHCCCCCCEECCCCCEEEE ESTDEAAARQQAAAQQQAAEAQLADLNLGRRVPEVDAVRAQLAQAVAADQLSATQRVRDE ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQFRAGGIPQAQLDASRSTAQTNAQRVRELTNQLRIAQLPARTDQIHAQSAQVEAARAAV HHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHEEHCCCCCCHHHHHHHHHHHHHHHHH AQAQWRLDQKAQKATQGGLVFDTLYREGEWVGAGSPVVRMLPPANVKVRFFVPEGVVGRL HHHHHHHHHHHHHHHCCCEEEEHHHCCCCEECCCCCEEEECCCCCEEEEEECCCCCCCCC KPGQAVRIRCDGCAAEVNATISYVASEAEYTPPVIYSNSRRDKLVFMVEARPAAADGPKL CCCCEEEEEECCCCHHHHHHHEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCC RPGQPVEVALP CCCCCEEEECC >Mature Secondary Structure AAVAMAAAVTGCGNPDTQSYQGYVEGEFVYVASPVGGRLEHLGVQRGQTVSAGTPLFIL CHHHHHHHHHCCCCCCCCCCCCEECCEEEEEECCCCCHHHHHCCCCCCEECCCCCEEEE ESTDEAAARQQAAAQQQAAEAQLADLNLGRRVPEVDAVRAQLAQAVAADQLSATQRVRDE ECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AQFRAGGIPQAQLDASRSTAQTNAQRVRELTNQLRIAQLPARTDQIHAQSAQVEAARAAV HHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHEEHCCCCCCHHHHHHHHHHHHHHHHH AQAQWRLDQKAQKATQGGLVFDTLYREGEWVGAGSPVVRMLPPANVKVRFFVPEGVVGRL HHHHHHHHHHHHHHHCCCEEEEHHHCCCCEECCCCCEEEECCCCCEEEEEECCCCCCCCC KPGQAVRIRCDGCAAEVNATISYVASEAEYTPPVIYSNSRRDKLVFMVEARPAAADGPKL CCCCEEEEEECCCCHHHHHHHEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCC RPGQPVEVALP CCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA