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The map label for this gene is 17544871

Identifier: 17544871

GI number: 17544871

Start: 172068

End: 172817

Strand: Reverse

Name: 17544871

Synonym: RSc0152

Alternate gene names: NA

Gene position: 172817-172068 (Counterclockwise)

Preceding gene: 17544872

Following gene: 17544868

Centisome position: 4.65

GC content: 67.73

Gene sequence:

>750_bases
ATGAACATCATGAGTCAAGGGTTGACCATGGCGGCCATCGCCTGCGCGCTGGCCGCGTCCGGCGCCGCCGCTGAAACGAT
CAGCGTCGTCGGCACCGGCGCGCAGACGACCGCGTCCGGCACCGAACCGGCGCAGCAGTACGACCCGAAGGCACAGACCG
CCGGCGCCACGGTGGTCTGGTCGGAGACCACCACGCGCCTGAACAGCGCGGTGTCGACCCGCACCCGCACCAACGTCACG
ACCTCCGTCGCCAACGGCATCGCCACGGTGGATGCGTCGGAGGGCGGCACGGCGGTGGAGCGCTACACCAGCGATGCCGA
CGGCAATCGCCTGACCCGCACGTATCTCAACAACGGCAACGTTTGCACCTACGCGCCCAAGCGCGACATGCTCAACTTCC
CCCTGTCGGTGGGCAAGACCTGGACGACGACGTGGCAGTACAGCTGCGCTGCCGGCTACCGGGAGTTCGCCACCCTGAAT
GCGGCGGTGGAAGCCCTGGAGGTGCTGGCGATCCCGGCGGGCACCTTCAATGCGCTGCGCATCCACTACGCGCTGGCCAT
CACCAACTCGAACGACTCGCAATTGCCGGGCGGCTCCACCGGCTCGGCCGCCTACAACCAGGACTACCGCTGCTGGTGGG
AGGTGGACGGCGGCCGCATCGTCAAGTGCGACTTCACGTACACGTACCCCGCGGGCGCGCCGTCCAATTTCACCAAGACG
TTCTCGCAGGTGGCGACGTCGGTCCAGTAG

Upstream 100 bases:

>100_bases
ATTCCGGCGATCACGGGCAGGCATATCCCGACATTCCTGTAGGCTCTGCGGCGCAGCGTGGCTGCATTCGACACCACCGC
AAACCACGAGGAATCAGAAG

Downstream 100 bases:

>100_bases
TCACCTGGATGCCCCGACGCGAGGCCCTTCAGGGTGCACCGGCCTCGCGGGGCGTTGCTCCGGCGTGCCCGCCATGCGCG
CGCGCCGCGACAGCGCCATC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNIMSQGLTMAAIACALAASGAAAETISVVGTGAQTTASGTEPAQQYDPKAQTAGATVVWSETTTRLNSAVSTRTRTNVT
TSVANGIATVDASEGGTAVERYTSDADGNRLTRTYLNNGNVCTYAPKRDMLNFPLSVGKTWTTTWQYSCAAGYREFATLN
AAVEALEVLAIPAGTFNALRIHYALAITNSNDSQLPGGSTGSAAYNQDYRCWWEVDGGRIVKCDFTYTYPAGAPSNFTKT
FSQVATSVQ

Sequences:

>Translated_249_residues
MNIMSQGLTMAAIACALAASGAAAETISVVGTGAQTTASGTEPAQQYDPKAQTAGATVVWSETTTRLNSAVSTRTRTNVT
TSVANGIATVDASEGGTAVERYTSDADGNRLTRTYLNNGNVCTYAPKRDMLNFPLSVGKTWTTTWQYSCAAGYREFATLN
AAVEALEVLAIPAGTFNALRIHYALAITNSNDSQLPGGSTGSAAYNQDYRCWWEVDGGRIVKCDFTYTYPAGAPSNFTKT
FSQVATSVQ
>Mature_249_residues
MNIMSQGLTMAAIACALAASGAAAETISVVGTGAQTTASGTEPAQQYDPKAQTAGATVVWSETTTRLNSAVSTRTRTNVT
TSVANGIATVDASEGGTAVERYTSDADGNRLTRTYLNNGNVCTYAPKRDMLNFPLSVGKTWTTTWQYSCAAGYREFATLN
AAVEALEVLAIPAGTFNALRIHYALAITNSNDSQLPGGSTGSAAYNQDYRCWWEVDGGRIVKCDFTYTYPAGAPSNFTKT
FSQVATSVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26228; Mature: 26228

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIMSQGLTMAAIACALAASGAAAETISVVGTGAQTTASGTEPAQQYDPKAQTAGATVVW
CCCHHHCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEE
SETTTRLNSAVSTRTRTNVTTSVANGIATVDASEGGTAVERYTSDADGNRLTRTYLNNGN
CCHHHHHHHHHHHCCCCCEEHHHHCCEEEEECCCCCCCHHHCCCCCCCCEEEEEEECCCC
VCTYAPKRDMLNFPLSVGKTWTTTWQYSCAAGYREFATLNAAVEALEVLAIPAGTFNALR
EEEECCCCCCCCCCCCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHEEECCCCCCEEE
IHYALAITNSNDSQLPGGSTGSAAYNQDYRCWWEVDGGRIVKCDFTYTYPAGAPSNFTKT
EEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCHHHHH
FSQVATSVQ
HHHHHHCCC
>Mature Secondary Structure
MNIMSQGLTMAAIACALAASGAAAETISVVGTGAQTTASGTEPAQQYDPKAQTAGATVVW
CCCHHHCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEE
SETTTRLNSAVSTRTRTNVTTSVANGIATVDASEGGTAVERYTSDADGNRLTRTYLNNGN
CCHHHHHHHHHHHCCCCCEEHHHHCCEEEEECCCCCCCHHHCCCCCCCCEEEEEEECCCC
VCTYAPKRDMLNFPLSVGKTWTTTWQYSCAAGYREFATLNAAVEALEVLAIPAGTFNALR
EEEECCCCCCCCCCCCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHEEECCCCCCEEE
IHYALAITNSNDSQLPGGSTGSAAYNQDYRCWWEVDGGRIVKCDFTYTYPAGAPSNFTKT
EEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCCCCCHHHHH
FSQVATSVQ
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA