Click here to switch to the map view.

The map label for this gene is 17544862

Identifier: 17544862

GI number: 17544862

Start: 165027

End: 165554

Strand: Direct

Name: 17544862

Synonym: RSc0143

Alternate gene names: NA

Gene position: 165027-165554 (Clockwise)

Preceding gene: 17544861

Following gene: 17544869

Centisome position: 4.44

GC content: 70.83

Gene sequence:

>528_bases
ATGAGCGAGATCGTCTGGCCCGAGCGTTTCCTGCCGGGCACCACCGACAACTATGTTTCCAACGAGACCATCGTGGCCGG
CCTGCGCGCGGCCGACGTATGGCCCTGGCTGAACGACACCGCGGTCTGGCCGGCCTGCTACGGCAACGTCTCGGACATCC
GCTTCCATGACGGCTCGGGGCCCGGGCTGCGCCATGGTGCCCGTTTCCGCTTCACGACCTTCAGCTTCCCCGTGGAGGCG
GAGGTGACCGAGTACGAGCCGCCCGCTGGCGGCAAGCCGGCCCGCATCGCCTGGCACGGCTGGGTCGAGGGCGATGCGCA
GGCGCGGCTGGACGTGCACCATGCCTGGCTGTTCGAGGACCTGCCCGGCGGCCGCGTGCGCATCCTCACGCAAGAGACGC
AGATCGGCGAACCGGCCCGGGAACTGGCGCGGACGCTGCCCAACCCCATGCTCAATGCCCACCAGGCGTGGGTCGACGGT
CTGGCGCGCAGCGCGGTCGAGGGCGTGCGCGCGGCAGCCGGTCGGTAA

Upstream 100 bases:

>100_bases
GGGCCCGCATCATTCCAGGCAACGCGATGCCTGGCAGCGCCAGCCGGCCGGCCACCGCGTCCTTCTGTTTCTGCTGGACT
GAATGCCAAGGATGCATGCC

Downstream 100 bases:

>100_bases
CCTGGTGGCTGGCTGGCGGGTCAGGTACCCGCAGGGAAGTGGAGGTCCGATCCGCTTTCCGCGGGCACTTGCGAGGGGGC
CGTATCCGGCGTGCCGCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 174

Protein sequence:

>175_residues
MSEIVWPERFLPGTTDNYVSNETIVAGLRAADVWPWLNDTAVWPACYGNVSDIRFHDGSGPGLRHGARFRFTTFSFPVEA
EVTEYEPPAGGKPARIAWHGWVEGDAQARLDVHHAWLFEDLPGGRVRILTQETQIGEPARELARTLPNPMLNAHQAWVDG
LARSAVEGVRAAAGR

Sequences:

>Translated_175_residues
MSEIVWPERFLPGTTDNYVSNETIVAGLRAADVWPWLNDTAVWPACYGNVSDIRFHDGSGPGLRHGARFRFTTFSFPVEA
EVTEYEPPAGGKPARIAWHGWVEGDAQARLDVHHAWLFEDLPGGRVRILTQETQIGEPARELARTLPNPMLNAHQAWVDG
LARSAVEGVRAAAGR
>Mature_174_residues
SEIVWPERFLPGTTDNYVSNETIVAGLRAADVWPWLNDTAVWPACYGNVSDIRFHDGSGPGLRHGARFRFTTFSFPVEAE
VTEYEPPAGGKPARIAWHGWVEGDAQARLDVHHAWLFEDLPGGRVRILTQETQIGEPARELARTLPNPMLNAHQAWVDGL
ARSAVEGVRAAAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19353; Mature: 19222

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIVWPERFLPGTTDNYVSNETIVAGLRAADVWPWLNDTAVWPACYGNVSDIRFHDGSG
CCCCCCCHHCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCEECHHHCCCCCEEEEECCCC
PGLRHGARFRFTTFSFPVEAEVTEYEPPAGGKPARIAWHGWVEGDAQARLDVHHAWLFED
CCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEECEECCCCCEEEEEHEEEEECC
LPGGRVRILTQETQIGEPARELARTLPNPMLNAHQAWVDGLARSAVEGVRAAAGR
CCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEIVWPERFLPGTTDNYVSNETIVAGLRAADVWPWLNDTAVWPACYGNVSDIRFHDGSG
CCCCCCHHCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCEECHHHCCCCCEEEEECCCC
PGLRHGARFRFTTFSFPVEAEVTEYEPPAGGKPARIAWHGWVEGDAQARLDVHHAWLFED
CCCCCCCEEEEEEECCCCCCCEECCCCCCCCCCCEEEEECEECCCCCEEEEEHEEEEECC
LPGGRVRILTQETQIGEPARELARTLPNPMLNAHQAWVDGLARSAVEGVRAAAGR
CCCCEEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA