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The map label for this gene is yezC [H]

Identifier: 17544847

GI number: 17544847

Start: 150207

End: 150665

Strand: Reverse

Name: yezC [H]

Synonym: RSc0128

Alternate gene names: 17544847

Gene position: 150665-150207 (Counterclockwise)

Preceding gene: 17544849

Following gene: 17544846

Centisome position: 4.05

GC content: 68.41

Gene sequence:

>459_bases
ATGGAACTGGATAAGAAGGACTGGCTGATCCTCGAAGCGCTGCAGACCGATGCGCGGCAGAGCCTGGCGGCGCTGGGCAA
GCGCATCGGGCTGTCGCAGCCGGCCATGAGCGAGCGCGTGCGCAAGCTCGAGGACGCCGGCGTGATCGAAGGCTACGGCG
CGCGCGTCAACCTGCGCCGGATCGGCATCGGCCTGCAGGCGATCATCCAGATCGAGACCACGCATGCCCACATCCGCAAA
TACATCCAGCTGTTCGAAGCGATGCCCGAGGTGCTGGAAGCCAGCCGCGTGACCGGCGCGCACTGCTTCATCGTCCGCTG
CGCGATCGCCGAGCCGGGCGACCTGGAGCGCGTGGTGGACAGCCTGGCCGTGCACGGCGCCGTCACCACGTCGCTGGTGC
TGTCAACCCCGGTGGCCAAGGCGGTGACGGTCCGGACGGCGCGCAGGCAAGGAGTCTGA

Upstream 100 bases:

>100_bases
GCCTCGTATGATAGGCAGCCGCGCCCGCACGCCGAAAGGCGTTTACATCCAAAATCGGGCCGGTCGGCCGATGATGCATC
GGCCCCTTGTGGAGTCGGGC

Downstream 100 bases:

>100_bases
GCCCACGCCGTTGCCCATGACAGGCCGTCCGGCCGGAAGCCCCGCAGGCCCCAGGCTGAACGTGAGCCTGCGCAATCCGG
TGCCCGAGACAGCATCGGCC

Product: transcription regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MELDKKDWLILEALQTDARQSLAALGKRIGLSQPAMSERVRKLEDAGVIEGYGARVNLRRIGIGLQAIIQIETTHAHIRK
YIQLFEAMPEVLEASRVTGAHCFIVRCAIAEPGDLERVVDSLAVHGAVTTSLVLSTPVAKAVTVRTARRQGV

Sequences:

>Translated_152_residues
MELDKKDWLILEALQTDARQSLAALGKRIGLSQPAMSERVRKLEDAGVIEGYGARVNLRRIGIGLQAIIQIETTHAHIRK
YIQLFEAMPEVLEASRVTGAHCFIVRCAIAEPGDLERVVDSLAVHGAVTTSLVLSTPVAKAVTVRTARRQGV
>Mature_152_residues
MELDKKDWLILEALQTDARQSLAALGKRIGLSQPAMSERVRKLEDAGVIEGYGARVNLRRIGIGLQAIIQIETTHAHIRK
YIQLFEAMPEVLEASRVTGAHCFIVRCAIAEPGDLERVVDSLAVHGAVTTSLVLSTPVAKAVTVRTARRQGV

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=139, Percent_Identity=31.6546762589928, Blast_Score=67, Evalue=5e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR000835
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16593; Mature: 16593

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDKKDWLILEALQTDARQSLAALGKRIGLSQPAMSERVRKLEDAGVIEGYGARVNLRR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCEEEHHH
IGIGLQAIIQIETTHAHIRKYIQLFEAMPEVLEASRVTGAHCFIVRCAIAEPGDLERVVD
HCCCEEHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHH
SLAVHGAVTTSLVLSTPVAKAVTVRTARRQGV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELDKKDWLILEALQTDARQSLAALGKRIGLSQPAMSERVRKLEDAGVIEGYGARVNLRR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEECCCCEEEHHH
IGIGLQAIIQIETTHAHIRKYIQLFEAMPEVLEASRVTGAHCFIVRCAIAEPGDLERVVD
HCCCEEHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHH
SLAVHGAVTTSLVLSTPVAKAVTVRTARRQGV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]