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The map label for this gene is thiO [H]

Identifier: 17544831

GI number: 17544831

Start: 129215

End: 130354

Strand: Reverse

Name: thiO [H]

Synonym: RSc0112

Alternate gene names: 17544831

Gene position: 130354-129215 (Counterclockwise)

Preceding gene: 17544832

Following gene: 17544830

Centisome position: 3.51

GC content: 73.16

Gene sequence:

>1140_bases
ATGCCAACCCCATTTGACGTAACGATCCTCGGCGGCGGCCTCGCTGGCCGCCTGTGTGCATGGCAACTCGCGCAGACGGG
GGTACCGCCGGCGCGCATTGCCGTGGTGGAGCGCGGCGCGCGCGACGGCAGCGGCAGCGCCGCGTATGTCGCCGCCGCCA
TGCTGGCGCCGCTGGCCGAAGCCGCGGTGGCCGACCGCTTCGTCGTCGAACTGGGGCTGGCGAGCCTGACGCTGTGGCGC
GACTGGCTGCCGATGCTGCGCACGCCGGTGTTCTTCCAGCAGGCCGGCACGCTGGTGGTGTGGCATCCGGCGGACCGCGG
CGAGGCCTCGCTGTTCGCCAACCACGTGCGGGCCGCGACCCCGCCCGAGCGCATCGCCGCCGATCTGCGGGCCGTGGACG
CGGAAGGCATCGGCACGCTGGAGCCGGCGCTGGCGCAGCGCTTCTCGCAAGGGCTGTATCTGGCGGGCGAAGGCCAGCTG
GACAACCGGGCCGTGCTCGATGCGCTGGCGACCGAGCTGGAGGCCCTGGGCGTGCAGTTGCGCTGGAACACGGCGGTTGC
CGATCCGCATCCGCAAGCGCTGGCCGCCGCCGGACTCGGCGCGCGCCTCGTGCTCGACTGCCGGGGCCTCGGCGCCCAGC
CGCAATGGCCGCAGCTGCGCGGCCTGCGCGGCGAGGTGGCGCGCATCCATGCGCCCGATGTCACGCTCACGCGGCCGGTG
CGCATGCTGCATCCGCGCTATCCGATCTACATCGCGCCCAAGCCGGGCCATGTCTATGTGATCGGCGCCACGGAGATCGA
AAGCGACGACATGTCGCCCGTGAGCGTGCGCTCGACGCTGGAGCTGCTGTCCGCCGCGTATGCGGTGCACCCGGCCTTTG
GCGAAGCGCGCGTGCTGGAGCTGTGCACGCAGTGCCGCCCGACACTGCCCGACCATCGCCCGGCGATCCGCTGGGATGGC
GCGGGCACGCTATCGGTCAACGGCCTGTACCGGCACGGCTACATGATCGCGCCCGCCGTCGCGCAGGCGGCCGTGGCCGC
CGCGCACGCGCTGCTGGACGGCCGCGCCATCGATGCCCCCGCGAGCGCGTGGCCCGGACTCTTCGCCGCGCCCGCATCGC
CCGAACCTGTTTTGCCATGA

Upstream 100 bases:

>100_bases
CTCGACGCGAACGCCACCGCCGCGGAGCATGGCATGGAAGAAAAGTCGATCGAGTTCCGCAAGGCCGGCGCAAAGATTTA
CAGCTGACACAACCGATGCA

Downstream 100 bases:

>100_bases
CGCTCAACGTCACCCTCAACGACCTGTCGCTCGCGCTGCCCACCGGCAGCACGCTGGCCGACGCCATCGCCTTCGTTACC
ACGACGGCCGCGCCGCAACT

Product: D-amino acid oxidase flavoprotein oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MPTPFDVTILGGGLAGRLCAWQLAQTGVPPARIAVVERGARDGSGSAAYVAAAMLAPLAEAAVADRFVVELGLASLTLWR
DWLPMLRTPVFFQQAGTLVVWHPADRGEASLFANHVRAATPPERIAADLRAVDAEGIGTLEPALAQRFSQGLYLAGEGQL
DNRAVLDALATELEALGVQLRWNTAVADPHPQALAAAGLGARLVLDCRGLGAQPQWPQLRGLRGEVARIHAPDVTLTRPV
RMLHPRYPIYIAPKPGHVYVIGATEIESDDMSPVSVRSTLELLSAAYAVHPAFGEARVLELCTQCRPTLPDHRPAIRWDG
AGTLSVNGLYRHGYMIAPAVAQAAVAAAHALLDGRAIDAPASAWPGLFAAPASPEPVLP

Sequences:

>Translated_379_residues
MPTPFDVTILGGGLAGRLCAWQLAQTGVPPARIAVVERGARDGSGSAAYVAAAMLAPLAEAAVADRFVVELGLASLTLWR
DWLPMLRTPVFFQQAGTLVVWHPADRGEASLFANHVRAATPPERIAADLRAVDAEGIGTLEPALAQRFSQGLYLAGEGQL
DNRAVLDALATELEALGVQLRWNTAVADPHPQALAAAGLGARLVLDCRGLGAQPQWPQLRGLRGEVARIHAPDVTLTRPV
RMLHPRYPIYIAPKPGHVYVIGATEIESDDMSPVSVRSTLELLSAAYAVHPAFGEARVLELCTQCRPTLPDHRPAIRWDG
AGTLSVNGLYRHGYMIAPAVAQAAVAAAHALLDGRAIDAPASAWPGLFAAPASPEPVLP
>Mature_378_residues
PTPFDVTILGGGLAGRLCAWQLAQTGVPPARIAVVERGARDGSGSAAYVAAAMLAPLAEAAVADRFVVELGLASLTLWRD
WLPMLRTPVFFQQAGTLVVWHPADRGEASLFANHVRAATPPERIAADLRAVDAEGIGTLEPALAQRFSQGLYLAGEGQLD
NRAVLDALATELEALGVQLRWNTAVADPHPQALAAAGLGARLVLDCRGLGAQPQWPQLRGLRGEVARIHAPDVTLTRPVR
MLHPRYPIYIAPKPGHVYVIGATEIESDDMSPVSVRSTLELLSAAYAVHPAFGEARVLELCTQCRPTLPDHRPAIRWDGA
GTLSVNGLYRHGYMIAPAVAQAAVAAAHALLDGRAIDAPASAWPGLFAAPASPEPVLP

Specific function: May have amino acid oxidase activity in the biosynthesis of thiazole when cysteine gives its thiol group to be inserted into the thiazole molecule and the rest of the molecule is deaminated to give pyruvic acid and ammonia [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR012727 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: NA

Molecular weight: Translated: 40059; Mature: 39928

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPFDVTILGGGLAGRLCAWQLAQTGVPPARIAVVERGARDGSGSAAYVAAAMLAPLAE
CCCCEEEEEECCCHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHH
AAVADRFVVELGLASLTLWRDWLPMLRTPVFFQQAGTLVVWHPADRGEASLFANHVRAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEEECCCCCCCHHHHHHHHCCCC
PPERIAADLRAVDAEGIGTLEPALAQRFSQGLYLAGEGQLDNRAVLDALATELEALGVQL
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCEEE
RWNTAVADPHPQALAAAGLGARLVLDCRGLGAQPQWPQLRGLRGEVARIHAPDVTLTRPV
EECCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCCEEEEECCCCEEECCH
RMLHPRYPIYIAPKPGHVYVIGATEIESDDMSPVSVRSTLELLSAAYAVHPAFGEARVLE
HHHCCCCCEEEECCCCEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LCTQCRPTLPDHRPAIRWDGAGTLSVNGLYRHGYMIAPAVAQAAVAAAHALLDGRAIDAP
HHHHCCCCCCCCCCCEEECCCCEEEECCEEECCEEEHHHHHHHHHHHHHHHHCCCCCCCC
ASAWPGLFAAPASPEPVLP
CCCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
PTPFDVTILGGGLAGRLCAWQLAQTGVPPARIAVVERGARDGSGSAAYVAAAMLAPLAE
CCCEEEEEECCCHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHH
AAVADRFVVELGLASLTLWRDWLPMLRTPVFFQQAGTLVVWHPADRGEASLFANHVRAAT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCEEEECCCCCCCHHHHHHHHCCCC
PPERIAADLRAVDAEGIGTLEPALAQRFSQGLYLAGEGQLDNRAVLDALATELEALGVQL
CHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHCEEE
RWNTAVADPHPQALAAAGLGARLVLDCRGLGAQPQWPQLRGLRGEVARIHAPDVTLTRPV
EECCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCHHHCCCCCCEEEEECCCCEEECCH
RMLHPRYPIYIAPKPGHVYVIGATEIESDDMSPVSVRSTLELLSAAYAVHPAFGEARVLE
HHHCCCCCEEEECCCCEEEEEECCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LCTQCRPTLPDHRPAIRWDGAGTLSVNGLYRHGYMIAPAVAQAAVAAAHALLDGRAIDAP
HHHHCCCCCCCCCCCEEECCCCEEEECCEEECCEEEHHHHHHHHHHHHHHHHCCCCCCCC
ASAWPGLFAAPASPEPVLP
CCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371431 [H]