| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is thiG [H]
Identifier: 17544828
GI number: 17544828
Start: 126991
End: 127818
Strand: Reverse
Name: thiG [H]
Synonym: RSc0109
Alternate gene names: 17544828
Gene position: 127818-126991 (Counterclockwise)
Preceding gene: 17544830
Following gene: 17544827
Centisome position: 3.44
GC content: 71.86
Gene sequence:
>828_bases ATGACCACTACGAATCTTTCCGCGCTGGCCGATCCGCTGCGGCTGTATGACGAAGTCTTCGGCTCGCGGCTGCTGCTGGG CACCGCGCGCTATCCGTCGCCGCAATCGCTGGAAGACGCGGTGCGCGCGTGCGGCCCGGCCATGCTGACCGTGGCGCTGC GCCGCCAGAGCGCCGGCACACCCGAAGGCGGCGCGGGCTTCTGGAAGATGCTGCGCGCGCTGGGCGTGCCCGTGCTGCCC AACACGGCCGGCTGCTACTCCGCCGACGAGGCCTACACGCTCGCGCAGATGTCGCGCGAAGTGTTCGAGACCGACTGGAT CAAGCTCGAAGTCATCGGCGACGACTACACGCTGCAGCCCGACACGCTAGCGCTGCCTGCGGCCGCCGAACGCCTGATCC GCGACGGCTTCAAGGTGCTGCCGTACTGCACCGAAGACCTTGTGCTGTGCCGCCGCCTGCTCGACGTCGGCTGCCGGGCG CTGATGCCGTGGGCCGCCCCCATCGGCACCGGGCGCGGGCCGACCAACCCGTACGGCCTGCGCCTGCTGCGCGAGCGCCT GCCCGACGTGCCGCTGATCGTCGATGCCGGCCTGGGCGTGCCGTCGCACGCCACGCAGGTGATGGAGTGGGGCTACGACG GCGTGCTGCTCAACACCGCCGTCGCGCAGGCGGGCGATCCGGTGGCGATGGCGCGCGCGTTCGCGATGGCCACGCAGGCC GGCCGCCTGGCGCGGCTGTCGGGCCCGATGCCGGAGCGCGATGTCGCGCAGGCGAGCACGCCGGTGGTCGGCCTGCCGTT CTGGCATGCCGACAAGAACAGCGCATGA
Upstream 100 bases:
>100_bases GCCGTCCCATTGGCATGCTGGCATCTCCCGTTTCGTTGATGCCAACATCCTATGTAAACTTAGACCAGTTAACAACGGAA CAGGACACTAGGAGTCCCTG
Downstream 100 bases:
>100_bases GCGCATCCGCCCTGCGCTTTGCCAGCGCCTGGCCGGATGCCGCCGCGCTGGCCGACCGCCTCATCGATCGCCACGCCGAT GCCTTCGGCCGCGCGCCGCA
Product: thiazole synthase
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: NA
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTTTNLSALADPLRLYDEVFGSRLLLGTARYPSPQSLEDAVRACGPAMLTVALRRQSAGTPEGGAGFWKMLRALGVPVLP NTAGCYSADEAYTLAQMSREVFETDWIKLEVIGDDYTLQPDTLALPAAAERLIRDGFKVLPYCTEDLVLCRRLLDVGCRA LMPWAAPIGTGRGPTNPYGLRLLRERLPDVPLIVDAGLGVPSHATQVMEWGYDGVLLNTAVAQAGDPVAMARAFAMATQA GRLARLSGPMPERDVAQASTPVVGLPFWHADKNSA
Sequences:
>Translated_275_residues MTTTNLSALADPLRLYDEVFGSRLLLGTARYPSPQSLEDAVRACGPAMLTVALRRQSAGTPEGGAGFWKMLRALGVPVLP NTAGCYSADEAYTLAQMSREVFETDWIKLEVIGDDYTLQPDTLALPAAAERLIRDGFKVLPYCTEDLVLCRRLLDVGCRA LMPWAAPIGTGRGPTNPYGLRLLRERLPDVPLIVDAGLGVPSHATQVMEWGYDGVLLNTAVAQAGDPVAMARAFAMATQA GRLARLSGPMPERDVAQASTPVVGLPFWHADKNSA >Mature_274_residues TTTNLSALADPLRLYDEVFGSRLLLGTARYPSPQSLEDAVRACGPAMLTVALRRQSAGTPEGGAGFWKMLRALGVPVLPN TAGCYSADEAYTLAQMSREVFETDWIKLEVIGDDYTLQPDTLALPAAAERLIRDGFKVLPYCTEDLVLCRRLLDVGCRAL MPWAAPIGTGRGPTNPYGLRLLRERLPDVPLIVDAGLGVPSHATQVMEWGYDGVLLNTAVAQAGDPVAMARAFAMATQAG RLARLSGPMPERDVAQASTPVVGLPFWHADKNSA
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=253, Percent_Identity=44.6640316205534, Blast_Score=211, Evalue=4e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR008867 [H]
Pfam domain/function: PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 29538; Mature: 29407
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTNLSALADPLRLYDEVFGSRLLLGTARYPSPQSLEDAVRACGPAMLTVALRRQSAGT CCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCC PEGGAGFWKMLRALGVPVLPNTAGCYSADEAYTLAQMSREVFETDWIKLEVIGDDYTLQP CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEECC DTLALPAAAERLIRDGFKVLPYCTEDLVLCRRLLDVGCRALMPWAAPIGTGRGPTNPYGL CCEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RLLRERLPDVPLIVDAGLGVPSHATQVMEWGYDGVLLNTAVAQAGDPVAMARAFAMATQA HHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHC GRLARLSGPMPERDVAQASTPVVGLPFWHADKNSA CCHHHCCCCCCCHHHHHCCCCEEECCEECCCCCCC >Mature Secondary Structure TTTNLSALADPLRLYDEVFGSRLLLGTARYPSPQSLEDAVRACGPAMLTVALRRQSAGT CCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCC PEGGAGFWKMLRALGVPVLPNTAGCYSADEAYTLAQMSREVFETDWIKLEVIGDDYTLQP CCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEECC DTLALPAAAERLIRDGFKVLPYCTEDLVLCRRLLDVGCRALMPWAAPIGTGRGPTNPYGL CCEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH RLLRERLPDVPLIVDAGLGVPSHATQVMEWGYDGVLLNTAVAQAGDPVAMARAFAMATQA HHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCEEHHHHHHHCCCHHHHHHHHHHHHHC GRLARLSGPMPERDVAQASTPVVGLPFWHADKNSA CCHHHCCCCCCCHHHHHCCCCEEECCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA