| Definition | Ralstonia solanacearum GMI1000, complete genome. |
|---|---|
| Accession | NC_003295 |
| Length | 3,716,413 |
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The map label for this gene is ahcY [H]
Identifier: 17544812
GI number: 17544812
Start: 106034
End: 107458
Strand: Reverse
Name: ahcY [H]
Synonym: RSc0093
Alternate gene names: 17544812
Gene position: 107458-106034 (Counterclockwise)
Preceding gene: 17544813
Following gene: 17544811
Centisome position: 2.89
GC content: 64.28
Gene sequence:
>1425_bases ATGAACGCTGTGACCGATCTGAAACACGACTACCTCGTCGCCGACATCAAGCTGGCCGACTGGGGCCGCAAGGAAATCGC CATCGCCGAGACCGAAATGCCGGGCCTGATGGCGATCCGCGACGAATTTGCCGCCAGCCAGCCGCTCAAGGGCGCGCGCA TCGCCGGCTCGCTGCACATGACCATCCAGACCGCCGTGCTGATCGAGACGCTCAAGGCGCTCGGCGCCGACGTGCGCTGG GCCTCGTGCAACATCTTCTCGACGCAGGACCACGCCGCCGCCGCCATCGCTGCATCGGGTACGCCGGTGTTCGCGTTCAA GGGCGAGTCGCTCAAGGAATACTGGGACTTCACGCACCGCATCTTCGAATGGGCCGACGGCGGCACGCCCAACATGATCC TGGACGACGGCGGCGACGCCACGCTGCTGCTGCACCTGGGCGCCAAGGCTGAGCAGGACGCCTCGGTGATCGCCAAGCCG GGCAGCGAGGAAGAAACCTTCCTGTTCGCCGCGATCAAGGAAAAGCTGGCCAAGGACGCGACGTTCTACAGCCGCAACCT CGACGCCATCAAGGGCGTGACCGAAGAGACCACCACCGGCGTGCACCGCCTGTACCAGATGGCCCAGCGCGGCGAGCTGC GCTTCCCGGCCATCAACGTCAACGACTCGGTCACCAAGAGCAAGTTCGACAACCTGTACGGCTGCCGTGAATCGCTGGTC GACGGCATCAAGCGCGCGACCGACGTGATGATCGCCGGCAAGGTGGCCGTCGTGGCCGGCTACGGCGATGTGGGCAAGGG CTCGGCGCAGGCGCTGCGCGCGCTGTCGGCGCAGGTGTGGGTGACCGAAATCGACCCGATCTGCGCGCTGCAGGCCGCCA TGGAAGGCTACCGCGTGGTGACCATGGACTACGCCGCCGAGCACGGCGACATCTTCGTCACCTGCACCGGCAACTACCAC GTCATCACGCACGACCACATGGCCAAGATGAAAGACCAGGCCATCGTCTGCAACATCGGCCACTTCGACAACGAGATCGA CATCGCCTCGGTCGAGCAGTACCAGTGGGAAGAAATCAAGCCGCAGGTCGATCACGTGATCTTCCCCGACGGCAAGAAGA TCATCATCCTGGCCAAGGGCCGCCTGGTGAACCTGGGCTGCGCCACCGGCCATCCGTCGTACGTGATGAGCAGTTCGTTC GCCAACCAGACCATCGCCCAGATCGAGCTGTGGACCGAGGCGCAGAAGGGCTCGAGCAAGTACCCGGTGGGCGTCTACAC GCTGCCCAAGCATCTCGACGAGAAGGTCGCGCGCCTGCAGCTCAAGAAGCTGAACGCGCAGCTGACCGTGCTGACCGACA AACAGGCCGCCTACATCGGCGTGAGCAAGGAAGGCCCGTACAAGGCCGACCACTATCGCTATTAA
Upstream 100 bases:
>100_bases CGTATCCATCCGGGGCATCGGCCCCGTTCCACCGGCACCCGCGCAACCCGCGGCCGGGCGATCTCCCCAGCGTGCGGTCA CCTTTTTTCCGGAGTGATCC
Downstream 100 bases:
>100_bases GCTGCCCGCAGTATCCGCCCGCCGGTGCATCCCGCGCCGGCGGCGGCATTCAACCCGAGGCTCACCATGAGACTGCTCGC TGTCTGGGTCATCAACGCGC
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 474; Mature: 474
Protein sequence:
>474_residues MNAVTDLKHDYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRW ASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAEQDASVIAKP GSEEETFLFAAIKEKLAKDATFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCRESLV DGIKRATDVMIAGKVAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAAEHGDIFVTCTGNYH VITHDHMAKMKDQAIVCNIGHFDNEIDIASVEQYQWEEIKPQVDHVIFPDGKKIIILAKGRLVNLGCATGHPSYVMSSSF ANQTIAQIELWTEAQKGSSKYPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY
Sequences:
>Translated_474_residues MNAVTDLKHDYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRW ASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAEQDASVIAKP GSEEETFLFAAIKEKLAKDATFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCRESLV DGIKRATDVMIAGKVAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAAEHGDIFVTCTGNYH VITHDHMAKMKDQAIVCNIGHFDNEIDIASVEQYQWEEIKPQVDHVIFPDGKKIIILAKGRLVNLGCATGHPSYVMSSSF ANQTIAQIELWTEAQKGSSKYPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY >Mature_474_residues MNAVTDLKHDYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHMTIQTAVLIETLKALGADVRW ASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHRIFEWADGGTPNMILDDGGDATLLLHLGAKAEQDASVIAKP GSEEETFLFAAIKEKLAKDATFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCRESLV DGIKRATDVMIAGKVAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVVTMDYAAEHGDIFVTCTGNYH VITHDHMAKMKDQAIVCNIGHFDNEIDIASVEQYQWEEIKPQVDHVIFPDGKKIIILAKGRLVNLGCATGHPSYVMSSSF ANQTIAQIELWTEAQKGSSKYPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=469, Percent_Identity=60.7675906183369, Blast_Score=539, Evalue=1e-153, Organism=Homo sapiens, GI239937451, Length=444, Percent_Identity=60.5855855855856, Blast_Score=511, Evalue=1e-145, Organism=Homo sapiens, GI298286489, Length=467, Percent_Identity=49.4646680942184, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI195539337, Length=467, Percent_Identity=49.4646680942184, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI24308043, Length=467, Percent_Identity=49.4646680942184, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI195539349, Length=467, Percent_Identity=49.4646680942184, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI21361647, Length=467, Percent_Identity=47.96573875803, Blast_Score=439, Evalue=1e-123, Organism=Caenorhabditis elegans, GI17506425, Length=469, Percent_Identity=58.63539445629, Blast_Score=533, Evalue=1e-151, Organism=Saccharomyces cerevisiae, GI6320882, Length=479, Percent_Identity=57.6200417536534, Blast_Score=514, Evalue=1e-146, Organism=Drosophila melanogaster, GI24642172, Length=469, Percent_Identity=60.1279317697228, Blast_Score=529, Evalue=1e-150, Organism=Drosophila melanogaster, GI24656245, Length=456, Percent_Identity=49.3421052631579, Blast_Score=445, Evalue=1e-125, Organism=Drosophila melanogaster, GI45553387, Length=467, Percent_Identity=47.96573875803, Blast_Score=428, Evalue=1e-120, Organism=Drosophila melanogaster, GI45553385, Length=466, Percent_Identity=47.8540772532189, Blast_Score=426, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51950; Mature: 51950
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAVTDLKHDYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHM CCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEECEEEE TIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHR HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHH IFEWADGGTPNMILDDGGDATLLLHLGAKAEQDASVIAKPGSEEETFLFAAIKEKLAKDA HHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHCH TFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCRESLV HHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCEECCEECCCCCHHHHHHHHHHHHHHHHH DGIKRATDVMIAGKVAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVV HHHHHHHHEEEECCEEEEEECCCCCCCHHHHHHHHHHEEEEEECCHHHHHHHHHCCCEEE TMDYAAEHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEQYQWEEIK EEEECCCCCCEEEEEECCEEEEECHHHHHCCCCEEEEEECCCCCCCCEEECCHHHHHHCC PQVDHVIFPDGKKIIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAQKGSSK CCCCEEECCCCCEEEEEECCEEEEEEECCCCCCHHHCCHHCCCEEEEEEEEEHHCCCCCC YPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY CCEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MNAVTDLKHDYLVADIKLADWGRKEIAIAETEMPGLMAIRDEFAASQPLKGARIAGSLHM CCCCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEECEEEE TIQTAVLIETLKALGADVRWASCNIFSTQDHAAAAIAASGTPVFAFKGESLKEYWDFTHR HHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCCEEEEECCCHHHHHHHHHHH IFEWADGGTPNMILDDGGDATLLLHLGAKAEQDASVIAKPGSEEETFLFAAIKEKLAKDA HHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEHHHHHHHHHHCH TFYSRNLDAIKGVTEETTTGVHRLYQMAQRGELRFPAINVNDSVTKSKFDNLYGCRESLV HHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCEECCEECCCCCHHHHHHHHHHHHHHHHH DGIKRATDVMIAGKVAVVAGYGDVGKGSAQALRALSAQVWVTEIDPICALQAAMEGYRVV HHHHHHHHEEEECCEEEEEECCCCCCCHHHHHHHHHHEEEEEECCHHHHHHHHHCCCEEE TMDYAAEHGDIFVTCTGNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEQYQWEEIK EEEECCCCCCEEEEEECCEEEEECHHHHHCCCCEEEEEECCCCCCCCEEECCHHHHHHCC PQVDHVIFPDGKKIIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAQKGSSK CCCCEEECCCCCEEEEEECCEEEEEEECCCCCCHHHCCHHCCCEEEEEEEEEHHCCCCCC YPVGVYTLPKHLDEKVARLQLKKLNAQLTVLTDKQAAYIGVSKEGPYKADHYRY CCEEEEECHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA