| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232759
Identifier: 17232759
GI number: 17232759
Start: 6284680
End: 6285408
Strand: Reverse
Name: 17232759
Synonym: all5267
Alternate gene names: NA
Gene position: 6285408-6284680 (Counterclockwise)
Preceding gene: 17232760
Following gene: 17232757
Centisome position: 98.0
GC content: 39.92
Gene sequence:
>729_bases ATGGTTGAGCAACTTCTCATAAATAATGATGATTTCTATGTGCCAGATGCCAACCTGCTAGTTACAGAAGATGATACACC TGTGGATAATTTCGCATCTGCCAAACAACAACGCCTATTAGTCGGCTCTCTTTATAGTTCTTTACAAAACCAACCTTTTT TGGCTGAAGCCAATGTCGGTATATATCACACAGATAAACAGCCGCCAATTGTACCCGATGTTTTCCTGAGTTTGGATGTC GAAATTCCTGACAATTGGTGGGAGAAACAAAATCGTTGTTATATGGTTTGGCGATTTGGTAAACCCCCAGAAGTTGTGAT AGAAATTGTCTCCAATACAGAAGGTGAGGAACTTAGTAAAAAGTTGCAAATTTATGAACAAATGCGCGCAAGTTACTACA TTGTTTATGATTCTACTCAGCAATTAGGAGAGAAAATACTGCGAGTCTATGAACTTAGGGGAAGACGTTATTTTGAAACT TCAGAAAGTTGGTTAGAACAAGTTGGTTTAGGTGTCACTTTCTGGGAAGGTGAGTTTGAAGGTCGGCAGGATACTTGGTT ACGTTGGTGCTATCAAGATGGTAATGTTTTGTTGACAGGAGATGAACGTGCTGAACAAGAAAGACAACGTGCTGAACAGG AAAGACAACGTGCTGAACAAGCAGAAACACGCGCTCAATTATTGGCTGAAAGGTTAAGGGCTATGGGTATTGATCCTGAT ATTATATAG
Upstream 100 bases:
>100_bases GCGATCGCCTACAGTCAGTCTCAGACCATCACCCCAAGATATTCAACTGCCCACCAATCTATTAACCTAGAAATAACGCT CTTAGATAGTGGATAAATTT
Downstream 100 bases:
>100_bases ACGCATTTCGTGAATGTACGGTTTAATGGAGACGTTTCGTGAAACGTCTCTACGGTTGTTGTATGTGCTGGCAAACAATA TCTAATAAATCAGGATGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 242
Protein sequence:
>242_residues MVEQLLINNDDFYVPDANLLVTEDDTPVDNFASAKQQRLLVGSLYSSLQNQPFLAEANVGIYHTDKQPPIVPDVFLSLDV EIPDNWWEKQNRCYMVWRFGKPPEVVIEIVSNTEGEELSKKLQIYEQMRASYYIVYDSTQQLGEKILRVYELRGRRYFET SESWLEQVGLGVTFWEGEFEGRQDTWLRWCYQDGNVLLTGDERAEQERQRAEQERQRAEQAETRAQLLAERLRAMGIDPD II
Sequences:
>Translated_242_residues MVEQLLINNDDFYVPDANLLVTEDDTPVDNFASAKQQRLLVGSLYSSLQNQPFLAEANVGIYHTDKQPPIVPDVFLSLDV EIPDNWWEKQNRCYMVWRFGKPPEVVIEIVSNTEGEELSKKLQIYEQMRASYYIVYDSTQQLGEKILRVYELRGRRYFET SESWLEQVGLGVTFWEGEFEGRQDTWLRWCYQDGNVLLTGDERAEQERQRAEQERQRAEQAETRAQLLAERLRAMGIDPD II >Mature_242_residues MVEQLLINNDDFYVPDANLLVTEDDTPVDNFASAKQQRLLVGSLYSSLQNQPFLAEANVGIYHTDKQPPIVPDVFLSLDV EIPDNWWEKQNRCYMVWRFGKPPEVVIEIVSNTEGEELSKKLQIYEQMRASYYIVYDSTQQLGEKILRVYELRGRRYFET SESWLEQVGLGVTFWEGEFEGRQDTWLRWCYQDGNVLLTGDERAEQERQRAEQERQRAEQAETRAQLLAERLRAMGIDPD II
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28366; Mature: 28366
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEQLLINNDDFYVPDANLLVTEDDTPVDNFASAKQQRLLVGSLYSSLQNQPFLAEANVG CCCCEEECCCCEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC IYHTDKQPPIVPDVFLSLDVEIPDNWWEKQNRCYMVWRFGKPPEVVIEIVSNTEGEELSK EEECCCCCCCCCEEEEEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHH KLQIYEQMRASYYIVYDSTQQLGEKILRVYELRGRRYFETSESWLEQVGLGVTFWEGEFE HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCEEEECCCCC GRQDTWLRWCYQDGNVLLTGDERAEQERQRAEQERQRAEQAETRAQLLAERLRAMGIDPD CCHHHHHEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC II CC >Mature Secondary Structure MVEQLLINNDDFYVPDANLLVTEDDTPVDNFASAKQQRLLVGSLYSSLQNQPFLAEANVG CCCCEEECCCCEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC IYHTDKQPPIVPDVFLSLDVEIPDNWWEKQNRCYMVWRFGKPPEVVIEIVSNTEGEELSK EEECCCCCCCCCEEEEEEEEECCCHHHCCCCCEEEEEECCCCHHHHHHHHCCCCHHHHHH KLQIYEQMRASYYIVYDSTQQLGEKILRVYELRGRRYFETSESWLEQVGLGVTFWEGEFE HHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCEEEECCCCC GRQDTWLRWCYQDGNVLLTGDERAEQERQRAEQERQRAEQAETRAQLLAERLRAMGIDPD CCHHHHHEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC II CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA