| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232739
Identifier: 17232739
GI number: 17232739
Start: 6260198
End: 6260818
Strand: Reverse
Name: 17232739
Synonym: all5247
Alternate gene names: NA
Gene position: 6260818-6260198 (Counterclockwise)
Preceding gene: 17232740
Following gene: 17232738
Centisome position: 97.62
GC content: 43.8
Gene sequence:
>621_bases ATGGCTACCACAGGAAAAGCTTCAGCAGCTGTCACCTTCAACCTGGGTGGTTCTCCTACTGAGGTCGCACCGGACTTTGA ATATGTCCAAGGTAGTATTTCCTTTCTAGCAACAGGAAGCGGTGCTATATCATTACCTTTCATAGGAACAAATAGAAACG TTTATCGTTCAACCGAAGGTTTGGGGGTAACAATTACTGGATCAACCCTTGAACGCAATCAAGTTGATGGGTTTGTAGCT CCCGAAACACTAAACTTCGCTTTTAACCAAACTGTAAGGCTGCTCTCGGTCGGCTTCACTAGAGTTGGTAGCGGACTTAT CATAAATGATGATTTCACTTTCCTAAAAAATGGTATCGTAGTATCTACCCAGGATATTCCTGGGGGCAATTCAAATGATA CTGGCACTGGTACATTCACTTTTAACCCTGTTCAAGTTGGTAACTCTTTTGGATTCAGAGCAGGTCAGCTCAATGATGAC TTTTACGTCAGCAGTCTCACTGTTGAGACTGTTCCCGAACCAATCACTATGGCAGGACTCGCTCTAGGTTCTGGGTTTGG TGTACTACTCCGCAGAAAATACAAAAAGTCTGCAACTGTCTCTAACCAGTTGAGCAGTTAA
Upstream 100 bases:
>100_bases CTGGTCAAAACCTATTTTCTTTAGAGGAAAAAACTTAATGGCAAATTTGAGCATACTTAAAAACGTCGCTGCTGTGGCTG TGGCTTCTGCGGTAGCGGTA
Downstream 100 bases:
>100_bases TTCTTCAGATGACAAGCGAAACATACAAGCTAAAGCCTTACTGCATAAGGTGAATCTAATGATTAAAAATTAGACTCCCT TCTTGTGGGCAATAGTCATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MATTGKASAAVTFNLGGSPTEVAPDFEYVQGSISFLATGSGAISLPFIGTNRNVYRSTEGLGVTITGSTLERNQVDGFVA PETLNFAFNQTVRLLSVGFTRVGSGLIINDDFTFLKNGIVVSTQDIPGGNSNDTGTGTFTFNPVQVGNSFGFRAGQLNDD FYVSSLTVETVPEPITMAGLALGSGFGVLLRRKYKKSATVSNQLSS
Sequences:
>Translated_206_residues MATTGKASAAVTFNLGGSPTEVAPDFEYVQGSISFLATGSGAISLPFIGTNRNVYRSTEGLGVTITGSTLERNQVDGFVA PETLNFAFNQTVRLLSVGFTRVGSGLIINDDFTFLKNGIVVSTQDIPGGNSNDTGTGTFTFNPVQVGNSFGFRAGQLNDD FYVSSLTVETVPEPITMAGLALGSGFGVLLRRKYKKSATVSNQLSS >Mature_205_residues ATTGKASAAVTFNLGGSPTEVAPDFEYVQGSISFLATGSGAISLPFIGTNRNVYRSTEGLGVTITGSTLERNQVDGFVAP ETLNFAFNQTVRLLSVGFTRVGSGLIINDDFTFLKNGIVVSTQDIPGGNSNDTGTGTFTFNPVQVGNSFGFRAGQLNDDF YVSSLTVETVPEPITMAGLALGSGFGVLLRRKYKKSATVSNQLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21574; Mature: 21443
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTGKASAAVTFNLGGSPTEVAPDFEYVQGSISFLATGSGAISLPFIGTNRNVYRSTEG CCCCCCCCEEEEEECCCCCCCCCCCHHHHCCEEEEEEECCCEEEEEEEECCCCEEECCCC LGVTITGSTLERNQVDGFVAPETLNFAFNQTVRLLSVGFTRVGSGLIINDDFTFLKNGIV CEEEEECCCCCCCCCCCEECCCEECHHHHHHEEEEHHHHHHHCCCEEEECCHHHHHCCEE VSTQDIPGGNSNDTGTGTFTFNPVQVGNSFGFRAGQLNDDFYVSSLTVETVPEPITMAGL EEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEE ALGSGFGVLLRRKYKKSATVSNQLSS ECCCCCCEEHHHHHHHCCCCHHHCCC >Mature Secondary Structure ATTGKASAAVTFNLGGSPTEVAPDFEYVQGSISFLATGSGAISLPFIGTNRNVYRSTEG CCCCCCCEEEEEECCCCCCCCCCCHHHHCCEEEEEEECCCEEEEEEEECCCCEEECCCC LGVTITGSTLERNQVDGFVAPETLNFAFNQTVRLLSVGFTRVGSGLIINDDFTFLKNGIV CEEEEECCCCCCCCCCCEECCCEECHHHHHHEEEEHHHHHHHCCCEEEECCHHHHHCCEE VSTQDIPGGNSNDTGTGTFTFNPVQVGNSFGFRAGQLNDDFYVSSLTVETVPEPITMAGL EEECCCCCCCCCCCCEEEEEECCEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEE ALGSGFGVLLRRKYKKSATVSNQLSS ECCCCCCEEHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA