| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232738
Identifier: 17232738
GI number: 17232738
Start: 6258726
End: 6259565
Strand: Reverse
Name: 17232738
Synonym: all5246
Alternate gene names: NA
Gene position: 6259565-6258726 (Counterclockwise)
Preceding gene: 17232739
Following gene: 17232737
Centisome position: 97.6
GC content: 31.9
Gene sequence:
>840_bases ATGCAAAATAGGATATCAACATCACTAAATAATGCTGAATTCTGGCTGTTGGGCATAGCAGCCTCATTAATAGTAATTAA CTTAACACTAGTTTGGCGAAGAGATGACCCTACAAGTTTTTACATAAATTTTCTATTTTTTATTACAATATATTCTTTCC TTAAAGAAAAATACCACATCTTAAATTTACAAAGTGGAATTTTATCTAGTTTGTTAGGTATATTGTTGATTGCAGTAGTA TTTACTAGTAGTTTATTTCAAGTAAATATTGGTATATTATTCTTACTTCTTCCTTTGATATCTGGCTTTGGTCTCGCGCT ACTGGCTTCTGGTTACAAGGGGCTAAGGCAATACAAAAAAGAGTTTCTAGTCTTAGGTTTTCTTACCATACGTAATTTAC TGGGGTTATATCAACCAGACATATCACTTCTAACTGCTAAATTATCTACAGCCATTCTTTGGTACACAGGATTTAAAGTG AAACGTTCTGGAATCATGATTCATCTGCCAACAGGAAGTATAGAAGTATATTCTGCCTGTTCTGGTATGGACGTTATCAT AGATTTATTAAGCCTAGCAGTACTATTTATTTTCATGTTTGACATAAATTTGCTACAAAAGTTTATAGTACCAATAGTAG CGGCAGTAATAGCATTTGTTGTTAATGGTTTCAGAGTTTCCTTAATGGGGATTTTAGTAGCCCAAGGTAATAAACAAGCT TTTGAATATTGGCATACAGGTGATGGTTCTCTCGTATTTTCTATGATAGCTAGTCTATTTTTCTGTTGTTTTTGCTGGTT TTTATTAAGTCAAAATGAACAAGAAAATAAAACTAATTAA
Upstream 100 bases:
>100_bases AGTTTGTGAGAAATTATCATAAAGTTGTGAAAGAGGAAAAAAATTTTAAATTTACAAAAAGCGTAATTTATATCTCTAAC TTAGTTCATGATATAAGACC
Downstream 100 bases:
>100_bases AAGTTTTTAAGGTGATGCACTGGAAAGAAATTCGCATTAAATTTTTAATCTTAATCTTTGGTACAGGAATATTGATTATA GGTAAATTATTTTTATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MQNRISTSLNNAEFWLLGIAASLIVINLTLVWRRDDPTSFYINFLFFITIYSFLKEKYHILNLQSGILSSLLGILLIAVV FTSSLFQVNIGILFLLLPLISGFGLALLASGYKGLRQYKKEFLVLGFLTIRNLLGLYQPDISLLTAKLSTAILWYTGFKV KRSGIMIHLPTGSIEVYSACSGMDVIIDLLSLAVLFIFMFDINLLQKFIVPIVAAVIAFVVNGFRVSLMGILVAQGNKQA FEYWHTGDGSLVFSMIASLFFCCFCWFLLSQNEQENKTN
Sequences:
>Translated_279_residues MQNRISTSLNNAEFWLLGIAASLIVINLTLVWRRDDPTSFYINFLFFITIYSFLKEKYHILNLQSGILSSLLGILLIAVV FTSSLFQVNIGILFLLLPLISGFGLALLASGYKGLRQYKKEFLVLGFLTIRNLLGLYQPDISLLTAKLSTAILWYTGFKV KRSGIMIHLPTGSIEVYSACSGMDVIIDLLSLAVLFIFMFDINLLQKFIVPIVAAVIAFVVNGFRVSLMGILVAQGNKQA FEYWHTGDGSLVFSMIASLFFCCFCWFLLSQNEQENKTN >Mature_279_residues MQNRISTSLNNAEFWLLGIAASLIVINLTLVWRRDDPTSFYINFLFFITIYSFLKEKYHILNLQSGILSSLLGILLIAVV FTSSLFQVNIGILFLLLPLISGFGLALLASGYKGLRQYKKEFLVLGFLTIRNLLGLYQPDISLLTAKLSTAILWYTGFKV KRSGIMIHLPTGSIEVYSACSGMDVIIDLLSLAVLFIFMFDINLLQKFIVPIVAAVIAFVVNGFRVSLMGILVAQGNKQA FEYWHTGDGSLVFSMIASLFFCCFCWFLLSQNEQENKTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31308; Mature: 31308
Theoretical pI: Translated: 8.85; Mature: 8.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNRISTSLNNAEFWLLGIAASLIVINLTLVWRRDDPTSFYINFLFFITIYSFLKEKYHI CCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LNLQSGILSSLLGILLIAVVFTSSLFQVNIGILFLLLPLISGFGLALLASGYKGLRQYKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH EFLVLGFLTIRNLLGLYQPDISLLTAKLSTAILWYTGFKVKRSGIMIHLPTGSIEVYSAC HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCEEEHHHC SGMDVIIDLLSLAVLFIFMFDINLLQKFIVPIVAAVIAFVVNGFRVSLMGILVAQGNKQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FEYWHTGDGSLVFSMIASLFFCCFCWFLLSQNEQENKTN HHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MQNRISTSLNNAEFWLLGIAASLIVINLTLVWRRDDPTSFYINFLFFITIYSFLKEKYHI CCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH LNLQSGILSSLLGILLIAVVFTSSLFQVNIGILFLLLPLISGFGLALLASGYKGLRQYKK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH EFLVLGFLTIRNLLGLYQPDISLLTAKLSTAILWYTGFKVKRSGIMIHLPTGSIEVYSAC HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEECCEEEEECCCCEEEHHHC SGMDVIIDLLSLAVLFIFMFDINLLQKFIVPIVAAVIAFVVNGFRVSLMGILVAQGNKQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH FEYWHTGDGSLVFSMIASLFFCCFCWFLLSQNEQENKTN HHHEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA