| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232713
Identifier: 17232713
GI number: 17232713
Start: 6232257
End: 6233063
Strand: Reverse
Name: 17232713
Synonym: all5221
Alternate gene names: NA
Gene position: 6233063-6232257 (Counterclockwise)
Preceding gene: 17232714
Following gene: 17232711
Centisome position: 97.18
GC content: 40.89
Gene sequence:
>807_bases ATGAAGTTGGTATCTATATCAGTTGATTCACTGGCAACAAGACTGTATGTTTATTACACACTTTTCATTCGGTTTTTGAT TCTTATGAAGATCACGTCTGTTTTTTCTGCTTTATTAGCAGGATCGGGTATTGCCCTGGCTGTAAGTTCTATTAACCCTG CGGCTGCTATTACTACTACCTTCGGTTTTCAGAATATCATTGAAGGTCAACCCCCGAATGGTATTGATGGTACTGTTGCC ACATCTGGAAATACTGCTGGTGATGCCTATGTCGGCAACTTCGATTTTGATGTAGTCAGTGGTAGCGGAACTGTAGATTT TAAGTTTAACAACAAATTCATAAATAGTAGCACAAAGGTTGATCAGATTGCTTTTTCCGGTACAAGTAGTCTTTTCTCTA CTTATACTCCTAATGTTGGCAATTCTGGAACTGTAAGCTTTTTACCTATAACTACAGGAACTTTCCCACAGGGTAATAAT ATTGATCAACCTTGGACTATTGTCTTCCGTCTTAGTGCCGATGGCCCAACTAATGCGATAGATCCAAATGAAACGTTTGG TATTCGTTTCACGCTTGCAAATCCCAATACTTACCAAAGCGTTATTGAGGCTATTACTGTTGGTACGCTCAAAACAGCTA TCCGCGTTCAAGCATTTTCCGGAGATGGCAGTGATGCCTTTGTTAACTCCTCTACACCTGTTCCCGAACCCATCACCATG CTTGGTCTTGGTGTAGGTACTGCTGGTTTGGGTGCATTAAAGCGCAAGTACGGCAACAAAGAAGCCAAAGCAAAAGTAGT AGTTTAA
Upstream 100 bases:
>100_bases CTGAGTTTTAAAACATCGACACACCTCACTTAAATGAAAATCTCTATAAAGAATCATTAAATATCAAAAAAATTAAATAT TTTTATTTGATGAATATTTG
Downstream 100 bases:
>100_bases TCTAGAACCAAATAGTTTTGATTAAGCCAATAACAAGGCTAGATTCTCTCAAAAGTGTGTAATTTTCTTCATAGACATCT TAATAATTAAGCCATGTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MKLVSISVDSLATRLYVYYTLFIRFLILMKITSVFSALLAGSGIALAVSSINPAAAITTTFGFQNIIEGQPPNGIDGTVA TSGNTAGDAYVGNFDFDVVSGSGTVDFKFNNKFINSSTKVDQIAFSGTSSLFSTYTPNVGNSGTVSFLPITTGTFPQGNN IDQPWTIVFRLSADGPTNAIDPNETFGIRFTLANPNTYQSVIEAITVGTLKTAIRVQAFSGDGSDAFVNSSTPVPEPITM LGLGVGTAGLGALKRKYGNKEAKAKVVV
Sequences:
>Translated_268_residues MKLVSISVDSLATRLYVYYTLFIRFLILMKITSVFSALLAGSGIALAVSSINPAAAITTTFGFQNIIEGQPPNGIDGTVA TSGNTAGDAYVGNFDFDVVSGSGTVDFKFNNKFINSSTKVDQIAFSGTSSLFSTYTPNVGNSGTVSFLPITTGTFPQGNN IDQPWTIVFRLSADGPTNAIDPNETFGIRFTLANPNTYQSVIEAITVGTLKTAIRVQAFSGDGSDAFVNSSTPVPEPITM LGLGVGTAGLGALKRKYGNKEAKAKVVV >Mature_268_residues MKLVSISVDSLATRLYVYYTLFIRFLILMKITSVFSALLAGSGIALAVSSINPAAAITTTFGFQNIIEGQPPNGIDGTVA TSGNTAGDAYVGNFDFDVVSGSGTVDFKFNNKFINSSTKVDQIAFSGTSSLFSTYTPNVGNSGTVSFLPITTGTFPQGNN IDQPWTIVFRLSADGPTNAIDPNETFGIRFTLANPNTYQSVIEAITVGTLKTAIRVQAFSGDGSDAFVNSSTPVPEPITM LGLGVGTAGLGALKRKYGNKEAKAKVVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28101; Mature: 28101
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVSISVDSLATRLYVYYTLFIRFLILMKITSVFSALLAGSGIALAVSSINPAAAITTT CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEH FGFQNIIEGQPPNGIDGTVATSGNTAGDAYVGNFDFDVVSGSGTVDFKFNNKFINSSTKV HCHHHHHCCCCCCCCCCEEEECCCCCCCEEECCCEEEEEECCCEEEEEECCEEECCCCCE DQIAFSGTSSLFSTYTPNVGNSGTVSFLPITTGTFPQGNNIDQPWTIVFRLSADGPTNAI EEEEECCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCC DPNETFGIRFTLANPNTYQSVIEAITVGTLKTAIRVQAFSGDGSDAFVNSSTPVPEPITM CCCCCEEEEEEECCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEECCCCCCCCCCEE LGLGVGTAGLGALKRKYGNKEAKAKVVV EEECCCCHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MKLVSISVDSLATRLYVYYTLFIRFLILMKITSVFSALLAGSGIALAVSSINPAAAITTT CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEH FGFQNIIEGQPPNGIDGTVATSGNTAGDAYVGNFDFDVVSGSGTVDFKFNNKFINSSTKV HCHHHHHCCCCCCCCCCEEEECCCCCCCEEECCCEEEEEECCCEEEEEECCEEECCCCCE DQIAFSGTSSLFSTYTPNVGNSGTVSFLPITTGTFPQGNNIDQPWTIVFRLSADGPTNAI EEEEECCCHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCC DPNETFGIRFTLANPNTYQSVIEAITVGTLKTAIRVQAFSGDGSDAFVNSSTPVPEPITM CCCCCEEEEEEECCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEECCCCCCCCCCEE LGLGVGTAGLGALKRKYGNKEAKAKVVV EEECCCCHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA