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The map label for this gene is 17232624

Identifier: 17232624

GI number: 17232624

Start: 6129498

End: 6129941

Strand: Reverse

Name: 17232624

Synonym: all5132

Alternate gene names: NA

Gene position: 6129941-6129498 (Counterclockwise)

Preceding gene: 17232625

Following gene: 17232623

Centisome position: 95.57

GC content: 44.37

Gene sequence:

>444_bases
GTGAGGGAAGACGTGACTAGAGTTTTGTGCCTAGATACCAGCGTTTGGATTCCTTACCTTGTCCCAGAAGTTTATCAATC
TCAAGCTGTAACTCTAGTAACAGAAGCATTGAGCTTAAATATACGTTTAGTAGCACCTGCTTTTGCTTGGGCAGAAGTTG
GGTCTGTGCTACGGAAAAAAACGCGCATGGGAGTTATCACCGCAGAGGAAGCACTAGGCTTTTTTGAGGACTTTTGCGAA
CTGCCGATTGATTACATTGAAGAAGAAGCAATTCGCCTCAGAAGTTGGGAAATTGCGGAACAATACGGGTTATTAACTCT
TTATGATGCAGCATTTCTGGCTTGTGCCGAGATGACATCTGCTGAGTTTTGGACTGCTGACGCTGCACTGGTTAAGCAAG
TTATACCCAGACCGTCTTATTTGCGAGAGATCGGGGAAATATAA

Upstream 100 bases:

>100_bases
TGGGCTGCACATCAACGAATTCTTGCCCGTAGCGAAACCATCAAAGCTAAAACTGGCATACAACCAAGTTCTACAGAGAT
GATTCGTAGTCTCAGAGAAG

Downstream 100 bases:

>100_bases
AAGTTTTTAAAGCTAGATAAATTACAATAACTCGGATTAATGTTTCACAAAATAATGCTTTTTAAAGTAGTCAATTGCTT
CTCTAGGGGAAGAATTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: PilT Protein Domain Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MREDVTRVLCLDTSVWIPYLVPEVYQSQAVTLVTEALSLNIRLVAPAFAWAEVGSVLRKKTRMGVITAEEALGFFEDFCE
LPIDYIEEEAIRLRSWEIAEQYGLLTLYDAAFLACAEMTSAEFWTADAALVKQVIPRPSYLREIGEI

Sequences:

>Translated_147_residues
MREDVTRVLCLDTSVWIPYLVPEVYQSQAVTLVTEALSLNIRLVAPAFAWAEVGSVLRKKTRMGVITAEEALGFFEDFCE
LPIDYIEEEAIRLRSWEIAEQYGLLTLYDAAFLACAEMTSAEFWTADAALVKQVIPRPSYLREIGEI
>Mature_147_residues
MREDVTRVLCLDTSVWIPYLVPEVYQSQAVTLVTEALSLNIRLVAPAFAWAEVGSVLRKKTRMGVITAEEALGFFEDFCE
LPIDYIEEEAIRLRSWEIAEQYGLLTLYDAAFLACAEMTSAEFWTADAALVKQVIPRPSYLREIGEI

Specific function: Unknown

COG id: COG4113

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16641; Mature: 16641

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREDVTRVLCLDTSVWIPYLVPEVYQSQAVTLVTEALSLNIRLVAPAFAWAEVGSVLRKK
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHH
TRMGVITAEEALGFFEDFCELPIDYIEEEAIRLRSWEIAEQYGLLTLYDAAFLACAEMTS
HHCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
AEFWTADAALVKQVIPRPSYLREIGEI
CHHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure
MREDVTRVLCLDTSVWIPYLVPEVYQSQAVTLVTEALSLNIRLVAPAFAWAEVGSVLRKK
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHH
TRMGVITAEEALGFFEDFCELPIDYIEEEAIRLRSWEIAEQYGLLTLYDAAFLACAEMTS
HHCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC
AEFWTADAALVKQVIPRPSYLREIGEI
CHHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA