| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17232602
Identifier: 17232602
GI number: 17232602
Start: 6095025
End: 6097412
Strand: Reverse
Name: 17232602
Synonym: all5110
Alternate gene names: NA
Gene position: 6097412-6095025 (Counterclockwise)
Preceding gene: 17232603
Following gene: 17232600
Centisome position: 95.07
GC content: 40.91
Gene sequence:
>2388_bases ATGAAAATAACTTTTGCTAACCTAAGCTTACTTAGTGCAATCTACATCTTAGTTATTGGCAACATTAGTGTTCACGCACA AGTAACACCCGACAACACCCTCAATACTTCTGTGAGCGGTAGTAATCATTACAGCATCACCAACGGTACTCGTGTTGGTA ATAATTTATTTCATAGCTTTAGCCAATTTTCTATTCCTAACAATGGCTCTGCCTTGTTTGACAACGCTTCAGATGTCCAA AATATTTTTAGTCGAGTGACTGGTGGTCATGTTTCTACCATTAATGGTTCTATCAATGCCAAGGGAAGTGCCAATGTATT TTTAATCAACCCAAATGGGATTATTTTCGGAGCTAATGCCAGGTTAAATATTGGTGGATCGTTTGTCGGTACAACAGCTA ACAGCATTCAGTTTCTTGATGGAGTTGAGTTTAGTGCCACCAATCCTACAATATCTCCTTTGTTAACCATCAATATACCT CTCGGTTTGCAGTTTGGGCAGAATCCTAGTGCCATTCAAGTTCAAGCATCTGGAACTCAACTTCAAGTACCCACAGGAAA AACTTTAGCACTTATAGGAGGAGATATATTTGTAGACAGTCGTAATCTTTCCACTTCTCAAGGACGAATTGAATTCGGTG CAGTTGGGGAGGGGACTGTTAGCCTTACTCCCAATAATTTAGGTTGGAGTTTAGGTTATCAAGATGTTCAAAGTTTTGGG AATATTGACCTATCTAACCAAACTTTACTGTCAACAGGTGGCAATGGTGAAATTCATTTATGGGGGGCTAATGTCTCTTT GAGTGGGGGTTCTCGTGTATCGATTCAAAACATGACAAATGTCCAAACTCCGGGCAAAATTTCAGTCCATGCTACAAAAC TACTAACGGTCACTGGTGATAATCCCAGTGGTACTACTACTAGTGCAGTACGAGCAGGAGCGATCGGTACTGGGATGGTA GGCAATATTGAAATATCCACACGAGACCTGATGGCCAATAATGGTGGTATTATTCTGACCAGTAACATTAGTAATTCCGT AGGCGGAGGCAATATTACTGTTAATGCCTCTGGCAATATTCAAGTAGCAGGAGTAGGAAAGATATCAACTAATCGTAGTG GTATTTCTGGACTGACTTTTCTTTCTGGAAAGGGTGGAGATGTGAGCGTAGTTGCGAATCGCTTAGAAATTCTTGATGGT TCTGTAGTCACGACCTCTACAATTGGAACAGGTGCGGCAGGAAATGTGACAGTCAAGGCCACAGAATCTATTGAATTAGC CGGAGTTGAAACCGTCTCCACAAGTTTTGCACCCAGTTCCCTAAGTTCTTCAACTCTTGCTGCTGGTAATTCTGGCAATT TGATTGTGAATACAGCTAGATTATCAGTTCAAAGTGGGGCGAGAGTGGAAGCTTCTTCCTACGCCAGTGGGAAAGCCGGA AATGTCACTCTCCATGCCACAGAATCAATAGAAGTTGCTGGCAAGCCCAGACAATCATTCTTAATTCCCAGTTTTATAGG TTCATCAACAGTTCAACAAGCCGGTACATCAAGAGTTTTGACTGGAAATAGTGGAGATGTACAAATTACCACTCAGCAAT TGAAGGTTGCTAATAGTGGATTAATTAATGTTAGAAATGATGGTCGAGGTAATGCTGGAATGGTAAAAATAAATGTCAAT TCTCTAGTGTTGAATACTCAAGGTGCTATTACTGCTGTCACACAAATGGGAGAAGGGGGCAACATTGATGTTAATACCCA AACCCTATTGATGCGTCATAATAGTGCCATTAACGCTACATCAAATGCAATTGGTGATGGTGGTAATATCACTATTAATT CGCCTATCATTGTAGGTTTAGAAAACAGTGATATCATTGCCAATGCTGTCCACGGAAAAGGGGGCAATATTCAAATCACA ACTCAGGGAATTATCGGCTTACAATATAGTCCTCAACTCACTTCCGAAAATGATATTACTGCTAGTTCTCAATTTGGTGT GAACGGTACAGTTGAAGTAAATAATATTGGTGTTGATCCCAAATCCGGTTTAATCCAATTGCCGGCCAATATCACCGATC AATCACAACAAATTGCTAGTGGTTGTTCTAATACTACTGGTAGTAGTTTTGTCGCCACAGGCAGGGGTGGAATACCACAA AATCCCACACAAGAAATGAGGAGCGATCGCACTTGGTCTGACATTCGTGATATATCTGCATTCCAGAACAGACCACAAAT ACAATCACAAACACCCACACAGCCACAAATTCTCATCCAAGCTACTTCCTGGCATCGTAATACCCAAGGCAAAATTGAAT TAGTTGCAGAGCAATCTTCTACTCAGGCACAACTATCTTTAACCTGTGCAGCAATTTCCAAAAGTTAG
Upstream 100 bases:
>100_bases AAAAGCTGAAAAAACTCATCGTAAAATTACACAGCTACCCCAATAGCAAAATTTACCTTGGGAATACTAGATACAAGGTA AATAATTACAAGTTTGGCTG
Downstream 100 bases:
>100_bases TTACACATCCGACAAGGTTAGCAAAATCATCTTTTGGGAATACTACTTACAGGGTAGAAAATGGAAATAGCTTGATGAAA GTAACTTTTACGGTCTTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 795; Mature: 795
Protein sequence:
>795_residues MKITFANLSLLSAIYILVIGNISVHAQVTPDNTLNTSVSGSNHYSITNGTRVGNNLFHSFSQFSIPNNGSALFDNASDVQ NIFSRVTGGHVSTINGSINAKGSANVFLINPNGIIFGANARLNIGGSFVGTTANSIQFLDGVEFSATNPTISPLLTINIP LGLQFGQNPSAIQVQASGTQLQVPTGKTLALIGGDIFVDSRNLSTSQGRIEFGAVGEGTVSLTPNNLGWSLGYQDVQSFG NIDLSNQTLLSTGGNGEIHLWGANVSLSGGSRVSIQNMTNVQTPGKISVHATKLLTVTGDNPSGTTTSAVRAGAIGTGMV GNIEISTRDLMANNGGIILTSNISNSVGGGNITVNASGNIQVAGVGKISTNRSGISGLTFLSGKGGDVSVVANRLEILDG SVVTTSTIGTGAAGNVTVKATESIELAGVETVSTSFAPSSLSSSTLAAGNSGNLIVNTARLSVQSGARVEASSYASGKAG NVTLHATESIEVAGKPRQSFLIPSFIGSSTVQQAGTSRVLTGNSGDVQITTQQLKVANSGLINVRNDGRGNAGMVKINVN SLVLNTQGAITAVTQMGEGGNIDVNTQTLLMRHNSAINATSNAIGDGGNITINSPIIVGLENSDIIANAVHGKGGNIQIT TQGIIGLQYSPQLTSENDITASSQFGVNGTVEVNNIGVDPKSGLIQLPANITDQSQQIASGCSNTTGSSFVATGRGGIPQ NPTQEMRSDRTWSDIRDISAFQNRPQIQSQTPTQPQILIQATSWHRNTQGKIELVAEQSSTQAQLSLTCAAISKS
Sequences:
>Translated_795_residues MKITFANLSLLSAIYILVIGNISVHAQVTPDNTLNTSVSGSNHYSITNGTRVGNNLFHSFSQFSIPNNGSALFDNASDVQ NIFSRVTGGHVSTINGSINAKGSANVFLINPNGIIFGANARLNIGGSFVGTTANSIQFLDGVEFSATNPTISPLLTINIP LGLQFGQNPSAIQVQASGTQLQVPTGKTLALIGGDIFVDSRNLSTSQGRIEFGAVGEGTVSLTPNNLGWSLGYQDVQSFG NIDLSNQTLLSTGGNGEIHLWGANVSLSGGSRVSIQNMTNVQTPGKISVHATKLLTVTGDNPSGTTTSAVRAGAIGTGMV GNIEISTRDLMANNGGIILTSNISNSVGGGNITVNASGNIQVAGVGKISTNRSGISGLTFLSGKGGDVSVVANRLEILDG SVVTTSTIGTGAAGNVTVKATESIELAGVETVSTSFAPSSLSSSTLAAGNSGNLIVNTARLSVQSGARVEASSYASGKAG NVTLHATESIEVAGKPRQSFLIPSFIGSSTVQQAGTSRVLTGNSGDVQITTQQLKVANSGLINVRNDGRGNAGMVKINVN SLVLNTQGAITAVTQMGEGGNIDVNTQTLLMRHNSAINATSNAIGDGGNITINSPIIVGLENSDIIANAVHGKGGNIQIT TQGIIGLQYSPQLTSENDITASSQFGVNGTVEVNNIGVDPKSGLIQLPANITDQSQQIASGCSNTTGSSFVATGRGGIPQ NPTQEMRSDRTWSDIRDISAFQNRPQIQSQTPTQPQILIQATSWHRNTQGKIELVAEQSSTQAQLSLTCAAISKS >Mature_795_residues MKITFANLSLLSAIYILVIGNISVHAQVTPDNTLNTSVSGSNHYSITNGTRVGNNLFHSFSQFSIPNNGSALFDNASDVQ NIFSRVTGGHVSTINGSINAKGSANVFLINPNGIIFGANARLNIGGSFVGTTANSIQFLDGVEFSATNPTISPLLTINIP LGLQFGQNPSAIQVQASGTQLQVPTGKTLALIGGDIFVDSRNLSTSQGRIEFGAVGEGTVSLTPNNLGWSLGYQDVQSFG NIDLSNQTLLSTGGNGEIHLWGANVSLSGGSRVSIQNMTNVQTPGKISVHATKLLTVTGDNPSGTTTSAVRAGAIGTGMV GNIEISTRDLMANNGGIILTSNISNSVGGGNITVNASGNIQVAGVGKISTNRSGISGLTFLSGKGGDVSVVANRLEILDG SVVTTSTIGTGAAGNVTVKATESIELAGVETVSTSFAPSSLSSSTLAAGNSGNLIVNTARLSVQSGARVEASSYASGKAG NVTLHATESIEVAGKPRQSFLIPSFIGSSTVQQAGTSRVLTGNSGDVQITTQQLKVANSGLINVRNDGRGNAGMVKINVN SLVLNTQGAITAVTQMGEGGNIDVNTQTLLMRHNSAINATSNAIGDGGNITINSPIIVGLENSDIIANAVHGKGGNIQIT TQGIIGLQYSPQLTSENDITASSQFGVNGTVEVNNIGVDPKSGLIQLPANITDQSQQIASGCSNTTGSSFVATGRGGIPQ NPTQEMRSDRTWSDIRDISAFQNRPQIQSQTPTQPQILIQATSWHRNTQGKIELVAEQSSTQAQLSLTCAAISKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81560; Mature: 81560
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITFANLSLLSAIYILVIGNISVHAQVTPDNTLNTSVSGSNHYSITNGTRVGNNLFHSF CEEEEEHHHHHHHEEEEEECCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH SQFSIPNNGSALFDNASDVQNIFSRVTGGHVSTINGSINAKGSANVFLINPNGIIFGANA HHCCCCCCCCEEECCHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEECCCCEEEECCE RLNIGGSFVGTTANSIQFLDGVEFSATNPTISPLLTINIPLGLQFGQNPSAIQVQASGTQ EEEECCEEEECCCCCEEEECCCEEECCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCE LQVPTGKTLALIGGDIFVDSRNLSTSQGRIEFGAVGEGTVSLTPNNLGWSLGYQDVQSFG EECCCCCEEEEEECEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCEECCHHHHHHHC NIDLSNQTLLSTGGNGEIHLWGANVSLSGGSRVSIQNMTNVQTPGKISVHATKLLTVTGD CCCCCCCEEEEECCCCEEEEEECEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECC NPSGTTTSAVRAGAIGTGMVGNIEISTRDLMANNGGIILTSNISNSVGGGNITVNASGNI CCCCCCHHHEECCCCCCCEEEEEEEEEHEEEECCCCEEEECCCCCCCCCCEEEEECCCCE QVAGVGKISTNRSGISGLTFLSGKGGDVSVVANRLEILDGSVVTTSTIGTGAAGNVTVKA EEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEHHCCCCEEEEEECCCCCCCCEEEEE TESIELAGVETVSTSFAPSSLSSSTLAAGNSGNLIVNTARLSVQSGARVEASSYASGKAG ECCEEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCEEEECCCCCCCCC NVTLHATESIEVAGKPRQSFLIPSFIGSSTVQQAGTSRVLTGNSGDVQITTQQLKVANSG CEEEEEECEEEECCCCCHHEECHHHHCCHHHHHCCCCEEEECCCCCEEEEHHHEEECCCC LINVRNDGRGNAGMVKINVNSLVLNTQGAITAVTQMGEGGNIDVNTQTLLMRHNSAINAT EEEEECCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCEEECCEEEEEEECCCCCCC SNAIGDGGNITINSPIIVGLENSDIIANAVHGKGGNIQITTQGIIGLQYSPQLTSENDIT CCCCCCCCCEEECCCEEEEECCCCEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCE ASSQFGVNGTVEVNNIGVDPKSGLIQLPANITDQSQQIASGCSNTTGSSFVATGRGGIPQ ECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC NPTQEMRSDRTWSDIRDISAFQNRPQIQSQTPTQPQILIQATSWHRNTQGKIELVAEQSS CCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCC TQAQLSLTCAAISKS CCEEEEEEEEEECCC >Mature Secondary Structure MKITFANLSLLSAIYILVIGNISVHAQVTPDNTLNTSVSGSNHYSITNGTRVGNNLFHSF CEEEEEHHHHHHHEEEEEECCEEEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHH SQFSIPNNGSALFDNASDVQNIFSRVTGGHVSTINGSINAKGSANVFLINPNGIIFGANA HHCCCCCCCCEEECCHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEECCCCEEEECCE RLNIGGSFVGTTANSIQFLDGVEFSATNPTISPLLTINIPLGLQFGQNPSAIQVQASGTQ EEEECCEEEECCCCCEEEECCCEEECCCCCCCEEEEEEEEEEEEECCCCCEEEEEECCCE LQVPTGKTLALIGGDIFVDSRNLSTSQGRIEFGAVGEGTVSLTPNNLGWSLGYQDVQSFG EECCCCCEEEEEECEEEEECCCCCCCCCEEEEEECCCCEEEECCCCCCEECCHHHHHHHC NIDLSNQTLLSTGGNGEIHLWGANVSLSGGSRVSIQNMTNVQTPGKISVHATKLLTVTGD CCCCCCCEEEEECCCCEEEEEECEEEECCCCEEEEECCCCCCCCCEEEEEEEEEEEEECC NPSGTTTSAVRAGAIGTGMVGNIEISTRDLMANNGGIILTSNISNSVGGGNITVNASGNI CCCCCCHHHEECCCCCCCEEEEEEEEEHEEEECCCCEEEECCCCCCCCCCEEEEECCCCE QVAGVGKISTNRSGISGLTFLSGKGGDVSVVANRLEILDGSVVTTSTIGTGAAGNVTVKA EEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEEHHCCCCEEEEEECCCCCCCCEEEEE TESIELAGVETVSTSFAPSSLSSSTLAAGNSGNLIVNTARLSVQSGARVEASSYASGKAG ECCEEEEEEEEEECCCCCCCCCCCEEECCCCCCEEEEEEEEEECCCCEEEECCCCCCCCC NVTLHATESIEVAGKPRQSFLIPSFIGSSTVQQAGTSRVLTGNSGDVQITTQQLKVANSG CEEEEEECEEEECCCCCHHEECHHHHCCHHHHHCCCCEEEECCCCCEEEEHHHEEECCCC LINVRNDGRGNAGMVKINVNSLVLNTQGAITAVTQMGEGGNIDVNTQTLLMRHNSAINAT EEEEECCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCCCEEECCEEEEEEECCCCCCC SNAIGDGGNITINSPIIVGLENSDIIANAVHGKGGNIQITTQGIIGLQYSPQLTSENDIT CCCCCCCCCEEECCCEEEEECCCCEEEEEEECCCCCEEEEEEEEEEEEECCCCCCCCCCE ASSQFGVNGTVEVNNIGVDPKSGLIQLPANITDQSQQIASGCSNTTGSSFVATGRGGIPQ ECCCCCCCEEEEEEEECCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC NPTQEMRSDRTWSDIRDISAFQNRPQIQSQTPTQPQILIQATSWHRNTQGKIELVAEQSS CCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCC TQAQLSLTCAAISKS CCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA