| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232597
Identifier: 17232597
GI number: 17232597
Start: 6084684
End: 6086906
Strand: Reverse
Name: 17232597
Synonym: all5105
Alternate gene names: NA
Gene position: 6086906-6084684 (Counterclockwise)
Preceding gene: 17232598
Following gene: 17232596
Centisome position: 94.9
GC content: 42.87
Gene sequence:
>2223_bases GTGACTGGTGGTAGTGTTTCCAACATTGATGGTTTAATTCAAGCTAACGGTACTGCAAATTTATTTTTACTCAACCCTAG TGGAATCATATTTGGTAAAGATGCCAGTTTGAATATTGGTGGTTCGTTTATTGGTACAACAGCCAATAGTATTAAGTTTG CTGATGGGACAGAATTTAGCGGAGTTAAAACCAATACAACTCCTTTATTGACTATGAGTGTCCCAATCGGATTACAGTTT GGCGGCAATCCAGGAACTATTTCTGTTGAGGGAACAGGAAACAATCACATATTAAATGGTATATCTCCGATTTCGGGATT AACCAGTACCGATGGGTTACAGCTATCATCTGGAAAAACACTAGCTTTGGTTGGTGGTAATCTTGTCCTCAATGGGAGCT TTCTGTCCGCACCAGGAGGACGCATTGAACTGGGAAGCGTCAATCAAGGCGATGTCAATATCAATGTCGATTCTTCAGCA TTCACCCTGAGCTATCCTCGTGACAACTATAGCTTTGGTGATATTCAAATGAGCCGACGTGCTATAGCATCTGTGCGTGG CATCATTCCAGGCGCAATACAAGTTCAGGGAAAACAAATCAGTCTTCAAGACGGTTCTTTGGTGGTAGTACAAAATCTCG GTAGCCAGACTGCGGGTGATATTACAATCAATGCCACAGAGTCGTTGCAAGTGATAGGTATGTCCTCAAACTTTCAAAGT TCCAGTGGTATCGTCAATGAAACTCTGCAAGCAGGAGCAGCAGGAAATATTGCTATTATCACCCCAAAACTCACCATTGA TCGAGGTGCGATCATGATTAACCGTACCTATAGTTCAGCACCCAGTGGTAATGTCGTAGTTAAAGCCAATGAAGTTTTAG TGGGTGGGATTCAACCGGGGAATCCTAGTGCTAATCCGATATTTGGCGTGCTGATGGCTGCAACTTATGGTAAAGGTCAA AGTGGAGATTTATTGCTTTCTAGCGATCGCCTGTCAATTTTTGGTGGTGGTAATGTCGGTACGAGAAGCTTTCTTACAGG TAATGGTGGCAACGTTAAAATCAGTGCTGACACTGTTGATATATCAAGCTTAAATACCCTCCCAGGGTCTTATTTAATTA GTCTGTTATCAGCTAATACTTTTGGCTCTGGGAATGCTGGCAATCTTCAGCTTAATACGCGCAAACTGTCGATTCAAGAT GGCGGTTTAGTTTCAGTTTCGACTGTAAACTTTGGCAACGCTGGCAACCTGACGATTAATGCCACTGAATCAATTGATGT AAATGGAATCAAAGACCCACAAAATCCTAGCTATATTGGAGCGATCGCCCGTCCATTAACTGTGTTTACAACTTCTGGTA TCAGTAATAATAGCAACTCTACTGCCAAAGCCGGTAATATCACCATCAATACGCCTCAATTAACCGTTCGCAACCAGGGA CAAGTTTTTACCCAAAACCAGATTCTAGGTGATGCCGGCACTTTAAGAATTAACGCAAACACCTTACATCTTGACAATGG TGGTAGTCTTTCGGCATCTACAAAAGCAGGGGAAGGCGGTAACATCAATCTACAACTGCGGGATGTATTATTGATGCGTC AAGGTAGCTTTATCAATGCCGAAGCAGGTAGTAATGGCAATGGTGGCAACATTAACATTAACTCACCCAATGTGATTGGT CTAGAAAATAGCGATATCATTGCCAATGCAGTGCAAGGAAATGGTGGCAATATCGACATCACTACCCAAGGCATTATTGG TCTAGAATTTCGTAACACCCTCACCCCCAAAGATGACCTCACCAATGATATTACCGCCAGTTCTCAATTCAATCTCAACG GCAATGTGGAAATTAATAATGTTGGTGTTGACCCCAATTCTGGTTTAATTGAACTACCAGCAAATCTCAGTGATTCATCT CAACAAATTGCTAGTGGTTGTGATGTCAACCAAGGTAGTAGTTTTGTCGCTACAGGACGGGGTGGGATACCACAAAATCC TTCTCAGGAATTGAGGAGCGATCGCACTTGGTCTGATATCCGCGATCTCTCTGCATACCATACAACACAACCAGTACAGG CCCAAACACCGAAATCCCCAAAATTCCTTTTACAAGCTACTTTCTGGCGACGTAATGCCCAAGGCAAAATAGAGTTGGTT GCAGCTAAATCCCCTTCGCAGATGCAAACAGCCTTAACCTGTGCTGCTGTAGCCGAAAATTAA
Upstream 100 bases:
>100_bases CGGGAACAATCTGTTTCACAGTTTCAGTCAATTTTCTATTCCCAGTAAAGGTTCTGCACTCTTCGACAATGCCCCAGATA TCCAAAATATTTTTAGCCGT
Downstream 100 bases:
>100_bases TTAACGTTACAAATTTACTCAATTGGGAACAATAGATACGTAATAAAAACAAGAACTTGATTGATGAAATTAACTTTTGT TGGGTTTGGCGTGCTTAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 740; Mature: 739
Protein sequence:
>740_residues MTGGSVSNIDGLIQANGTANLFLLNPSGIIFGKDASLNIGGSFIGTTANSIKFADGTEFSGVKTNTTPLLTMSVPIGLQF GGNPGTISVEGTGNNHILNGISPISGLTSTDGLQLSSGKTLALVGGNLVLNGSFLSAPGGRIELGSVNQGDVNINVDSSA FTLSYPRDNYSFGDIQMSRRAIASVRGIIPGAIQVQGKQISLQDGSLVVVQNLGSQTAGDITINATESLQVIGMSSNFQS SSGIVNETLQAGAAGNIAIITPKLTIDRGAIMINRTYSSAPSGNVVVKANEVLVGGIQPGNPSANPIFGVLMAATYGKGQ SGDLLLSSDRLSIFGGGNVGTRSFLTGNGGNVKISADTVDISSLNTLPGSYLISLLSANTFGSGNAGNLQLNTRKLSIQD GGLVSVSTVNFGNAGNLTINATESIDVNGIKDPQNPSYIGAIARPLTVFTTSGISNNSNSTAKAGNITINTPQLTVRNQG QVFTQNQILGDAGTLRINANTLHLDNGGSLSASTKAGEGGNINLQLRDVLLMRQGSFINAEAGSNGNGGNININSPNVIG LENSDIIANAVQGNGGNIDITTQGIIGLEFRNTLTPKDDLTNDITASSQFNLNGNVEINNVGVDPNSGLIELPANLSDSS QQIASGCDVNQGSSFVATGRGGIPQNPSQELRSDRTWSDIRDLSAYHTTQPVQAQTPKSPKFLLQATFWRRNAQGKIELV AAKSPSQMQTALTCAAVAEN
Sequences:
>Translated_740_residues MTGGSVSNIDGLIQANGTANLFLLNPSGIIFGKDASLNIGGSFIGTTANSIKFADGTEFSGVKTNTTPLLTMSVPIGLQF GGNPGTISVEGTGNNHILNGISPISGLTSTDGLQLSSGKTLALVGGNLVLNGSFLSAPGGRIELGSVNQGDVNINVDSSA FTLSYPRDNYSFGDIQMSRRAIASVRGIIPGAIQVQGKQISLQDGSLVVVQNLGSQTAGDITINATESLQVIGMSSNFQS SSGIVNETLQAGAAGNIAIITPKLTIDRGAIMINRTYSSAPSGNVVVKANEVLVGGIQPGNPSANPIFGVLMAATYGKGQ SGDLLLSSDRLSIFGGGNVGTRSFLTGNGGNVKISADTVDISSLNTLPGSYLISLLSANTFGSGNAGNLQLNTRKLSIQD GGLVSVSTVNFGNAGNLTINATESIDVNGIKDPQNPSYIGAIARPLTVFTTSGISNNSNSTAKAGNITINTPQLTVRNQG QVFTQNQILGDAGTLRINANTLHLDNGGSLSASTKAGEGGNINLQLRDVLLMRQGSFINAEAGSNGNGGNININSPNVIG LENSDIIANAVQGNGGNIDITTQGIIGLEFRNTLTPKDDLTNDITASSQFNLNGNVEINNVGVDPNSGLIELPANLSDSS QQIASGCDVNQGSSFVATGRGGIPQNPSQELRSDRTWSDIRDLSAYHTTQPVQAQTPKSPKFLLQATFWRRNAQGKIELV AAKSPSQMQTALTCAAVAEN >Mature_739_residues TGGSVSNIDGLIQANGTANLFLLNPSGIIFGKDASLNIGGSFIGTTANSIKFADGTEFSGVKTNTTPLLTMSVPIGLQFG GNPGTISVEGTGNNHILNGISPISGLTSTDGLQLSSGKTLALVGGNLVLNGSFLSAPGGRIELGSVNQGDVNINVDSSAF TLSYPRDNYSFGDIQMSRRAIASVRGIIPGAIQVQGKQISLQDGSLVVVQNLGSQTAGDITINATESLQVIGMSSNFQSS SGIVNETLQAGAAGNIAIITPKLTIDRGAIMINRTYSSAPSGNVVVKANEVLVGGIQPGNPSANPIFGVLMAATYGKGQS GDLLLSSDRLSIFGGGNVGTRSFLTGNGGNVKISADTVDISSLNTLPGSYLISLLSANTFGSGNAGNLQLNTRKLSIQDG GLVSVSTVNFGNAGNLTINATESIDVNGIKDPQNPSYIGAIARPLTVFTTSGISNNSNSTAKAGNITINTPQLTVRNQGQ VFTQNQILGDAGTLRINANTLHLDNGGSLSASTKAGEGGNINLQLRDVLLMRQGSFINAEAGSNGNGGNININSPNVIGL ENSDIIANAVQGNGGNIDITTQGIIGLEFRNTLTPKDDLTNDITASSQFNLNGNVEINNVGVDPNSGLIELPANLSDSSQ QIASGCDVNQGSSFVATGRGGIPQNPSQELRSDRTWSDIRDLSAYHTTQPVQAQTPKSPKFLLQATFWRRNAQGKIELVA AKSPSQMQTALTCAAVAEN
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76024; Mature: 75892
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGGSVSNIDGLIQANGTANLFLLNPSGIIFGKDASLNIGGSFIGTTANSIKFADGTEFS CCCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCCEEECCEEEECCCCEEEECCCCCCC GVKTNTTPLLTMSVPIGLQFGGNPGTISVEGTGNNHILNGISPISGLTSTDGLQLSSGKT CEECCCCEEEEEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCCCEEECCCCE LALVGGNLVLNGSFLSAPGGRIELGSVNQGDVNINVDSSAFTLSYPRDNYSFGDIQMSRR EEEECCCEEEECCEEECCCCEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHH AIASVRGIIPGAIQVQGKQISLQDGSLVVVQNLGSQTAGDITINATESLQVIGMSSNFQS HHHHHHCCCCCEEEEECCEEEECCCCEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCC SSGIVNETLQAGAAGNIAIITPKLTIDRGAIMINRTYSSAPSGNVVVKANEVLVGGIQPG CCCCHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEECEEEEECCCCC NPSANPIFGVLMAATYGKGQSGDLLLSSDRLSIFGGGNVGTRSFLTGNGGNVKISADTVD CCCCCHHHEEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCEEEECCCCEEEEEEEEEE ISSLNTLPGSYLISLLSANTFGSGNAGNLQLNTRKLSIQDGGLVSVSTVNFGNAGNLTIN ECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCEEEE ATESIDVNGIKDPQNPSYIGAIARPLTVFTTSGISNNSNSTAKAGNITINTPQLTVRNQG ECCEEECCCCCCCCCCCEEEHHCCCEEEEEECCCCCCCCCCEECCEEEEECCEEEECCCC QVFTQNQILGDAGTLRINANTLHLDNGGSLSASTKAGEGGNINLQLRDVLLMRQGSFINA CEEECCEEECCCEEEEEECCEEEECCCCCEECCCCCCCCCEEEEEEEEEEEEECCCEEEE EAGSNGNGGNININSPNVIGLENSDIIANAVQGNGGNIDITTQGIIGLEFRNTLTPKDDL CCCCCCCCCEEEECCCCEEEECCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCCHHHC TNDITASSQFNLNGNVEINNVGVDPNSGLIELPANLSDSSQQIASGCDVNQGSSFVATGR CCCCCCCEEECCCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCEEEECC GGIPQNPSQELRSDRTWSDIRDLSAYHTTQPVQAQTPKSPKFLLQATFWRRNAQGKIELV CCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEE AAKSPSQMQTALTCAAVAEN EECCCHHHHHHEEEEEECCC >Mature Secondary Structure TGGSVSNIDGLIQANGTANLFLLNPSGIIFGKDASLNIGGSFIGTTANSIKFADGTEFS CCCCCCCCCEEEEECCCEEEEEECCCCEEEECCCCEEECCEEEECCCCEEEECCCCCCC GVKTNTTPLLTMSVPIGLQFGGNPGTISVEGTGNNHILNGISPISGLTSTDGLQLSSGKT CEECCCCEEEEEEEEEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCCCEEECCCCE LALVGGNLVLNGSFLSAPGGRIELGSVNQGDVNINVDSSAFTLSYPRDNYSFGDIQMSRR EEEECCCEEEECCEEECCCCEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCHHHHH AIASVRGIIPGAIQVQGKQISLQDGSLVVVQNLGSQTAGDITINATESLQVIGMSSNFQS HHHHHHCCCCCEEEEECCEEEECCCCEEEEEECCCCCCCCEEEECCCCEEEEEECCCCCC SSGIVNETLQAGAAGNIAIITPKLTIDRGAIMINRTYSSAPSGNVVVKANEVLVGGIQPG CCCCHHHHHHCCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCCEEEEECEEEEECCCCC NPSANPIFGVLMAATYGKGQSGDLLLSSDRLSIFGGGNVGTRSFLTGNGGNVKISADTVD CCCCCHHHEEEEEEECCCCCCCCEEEECCCEEEEECCCCCCCEEEECCCCEEEEEEEEEE ISSLNTLPGSYLISLLSANTFGSGNAGNLQLNTRKLSIQDGGLVSVSTVNFGNAGNLTIN ECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCCEEEEEEEECCCCCCEEEE ATESIDVNGIKDPQNPSYIGAIARPLTVFTTSGISNNSNSTAKAGNITINTPQLTVRNQG ECCEEECCCCCCCCCCCEEEHHCCCEEEEEECCCCCCCCCCEECCEEEEECCEEEECCCC QVFTQNQILGDAGTLRINANTLHLDNGGSLSASTKAGEGGNINLQLRDVLLMRQGSFINA CEEECCEEECCCEEEEEECCEEEECCCCCEECCCCCCCCCEEEEEEEEEEEEECCCEEEE EAGSNGNGGNININSPNVIGLENSDIIANAVQGNGGNIDITTQGIIGLEFRNTLTPKDDL CCCCCCCCCEEEECCCCEEEECCCCEEEEEEECCCCEEEEEECCEEEEEECCCCCCHHHC TNDITASSQFNLNGNVEINNVGVDPNSGLIELPANLSDSSQQIASGCDVNQGSSFVATGR CCCCCCCEEECCCCCEEEEEECCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCCEEEECC GGIPQNPSQELRSDRTWSDIRDLSAYHTTQPVQAQTPKSPKFLLQATFWRRNAQGKIELV CCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEE AAKSPSQMQTALTCAAVAEN EECCCHHHHHHEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA