| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232596
Identifier: 17232596
GI number: 17232596
Start: 6082134
End: 6084620
Strand: Reverse
Name: 17232596
Synonym: all5104
Alternate gene names: NA
Gene position: 6084620-6082134 (Counterclockwise)
Preceding gene: 17232597
Following gene: 17232594
Centisome position: 94.87
GC content: 41.94
Gene sequence:
>2487_bases ATGAAATTAACTTTTGTTGGGTTTGGCGTGCTTAGTGTAATCTGTTTATCTGCTGTTTGTAACAATAGTGTTCATGCCCA AGTAACTCAAGATAATACCCTCAATACTTCTGTTACTGCCACTACTTCCGTGAATGGAAGTAATATTTACAACATTACCA ACGGTACTCGTGTCGGCAATAATTTATTTCATAGTTTTAGTCAGTTCTCTATCCCTACAAGTGATTCTGTATTATTTGAC AATCCTACAAGTATTCAAAATATTTTTAGTCGTGTGACTGGTGGTAATGTTTCCAATATTGATGGTTTGATTCAAACTAA TGGCAGCGCCAATCTATTTTTACTTAACCCCACAGGAATAATTTTTGGTTCTCATGCCAGTTTAAATATTGGTGGATCAT TTGTCGGGACAACTGCTGAGACTATTACATTTGCGGATGGGAGTAAATTTAGTAGCACAGACACCAACACATCCCCCTTG TTAACCATGAATGTACCTGTTGGGTTGCAATTTGGTAGTAATCAAGGAGGGATTACAGTTCAAGGTACAGGACATAATGC CCAATTAAGTGACTCAGTGCAAGTTTCTGGACTAAATCTCAATTCCAGAGGATTACAACTACAACCAGGGAAAACACTAG CGTTATTAGGCAAAGATATTGCCTTAGATGGCGGACTGCTCTCTGCACCAGGAGGACTAATAGAATTGGGTGGTGTGACT AATGGCAATGTGATTCTCAATTCTACTCCGCAAGGATTTGCCTTCCAGTATTCTCAAGTTCCCAGTTTTGGCAATATTCA AATCACCCAACGAGCCTTAGCATCGACACGGGATTTAAATGGGGAAAGTGGAGGAGCCATCCATATCCAGGGAAAACGAG TCAGTATCCGCGATGGCTCGATGATATTAGTACAAAATCGCAGTCAAAAGACAGCTGGTGATATTGCTGTTGATGCTTCA GAGTTTTTAGAAATTACTGGCAAGTCGCCTGATTTTCAAAGTTCTAGCAGTTTAGTGAATGAAAGTACAGCCTTGGGTGC GGCGGGGAATATTATCATTAACACTCCACGATTGAATATTGATCAGGGTGGTTATATTTATAACCGGACTTTCAGCACAG CATCAGGGGGCAATATTATCGTCAACACCGATGAAACGCGGGTTAATGGTTTTGCAGTTGGTGATCCTTCAGCCTTTCGA GCAGTTAGTCAAATATTAGCTGCTTCCTATGCAGGCGGGAAAGGCGGCAATATTTCTGTCTCTACTCAAAAGCTGTCTGT TTTAGCTGGGGGAAATATAGCAGCCAGACCCTATGGTGTGGGTAGTGGGGGTGATGTGACGGTGAAGGCGGATACTATTG AAGTAAATAACACTGGAACTCCCACTGGTTTTTATTTTAGTCTCATCTCTACTGCCACATTTGGGTCTGGTAATGCGGGA AATTTGGCGATTGATACTCGTAAATTGTCAGTGCAAGCTGGCGGGAGAGTGTCTGCTTCTAGCATAATTTTAGGTAATGC TGGTGTACTCAATATTAATGCTTCCGAATCGATTGATGTAAATGGCGTAAAGGATGCAAACAATCCCAGCTATATCGGTA CGGCTGTGCGTCCTTTTGGTACATTTGCCCAAATTTCCCGTGCTAATGCAGGTAACACCACCATAAACACTCCTGTTTTG AATGTTACCAATGGGGCAACGGTTTTTGTAGAAAATTCTGGTTTGGGTACGGCTGGTACTCTGCAAATTAATGCCAACGT CCTCAAACTTGACAATAATGCAAGTATCCTAGCATCTAAAAAAGCTGGAGAGGGGGGCAATATCAATCTGCAACTGCGGG ATGTATTATTGATGCGTCGTGGTAGCTTGATCAATGCCGAAGCAGGTAGTAATGGCAATGGTGGCAACATTAATATTAAC TCTCCCATTGTGATTGGTCTAGAAAATAGTGACATTATTGCCAACGCCGTACAAGGAAAGGGGGGCAATATTCAAATCAC AACTCAGGGAATTATCGGTTTGGAGTACCGTAATCTTCTCAATCCAAGAGAGGTTTTGAGCAATGATATTACCGCAAGTT CCCAATTCAGTGTTAGTGGTACAGTCCAAATTAATAATGTTGGCATTGATCCTAATTCTGGTTTAATAGATTTACCAACA AATCTCTCAGACTCATCCCAACAAATTGCTACAGGCTGTTCTAATACTAATAATAGTAGTTTTGTCGCTACAGGACGGGG TGGTGTCCCACAAAATCCTATGCAGGAAGTGAGGAGCGATCGCCCTTGGTCTGACATCCGCGATATCTCTGCATTCCACA AAACGCCAGCTTTACAAGCCCAAATACTTGAATCTCCAAAAGTTTTTGTCCACGCTACATCTTGGCATCGTAACGCCCAA GGAAAAATTGAGCTTTTTGCCGCTAAATCTCCTACAGGTGTGCAACCGTCATTCACCTGTGCATCTCTTGCCAAAAGTGA ACTTTAG
Upstream 100 bases:
>100_bases AACAGCCTTAACCTGTGCTGCTGTAGCCGAAAATTAATTAACGTTACAAATTTACTCAATTGGGAACAATAGATACGTAA TAAAAACAAGAACTTGATTG
Downstream 100 bases:
>100_bases TGCTTTGTCATGACTCTAACCAAATCAAAATAGTACCAATTTGAAAAAAGAATGTGGCAGTCCTTAATTCTAAAATTTTA AGAGATGGGTGGGCATTACC
Product: hypothetical protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Filamentous Haemagglutinin Outer Membrane Protein; Filamentous Haemagglutinin Family N-Terminal Domain Protein; Filamentous Haemagglutinin-Like Protein; Hemagglutination Activity Domain-Containing Protein; Filamentous Haemagglutinin-Like; Filamentous Haemagglutinin-Like Protein Protein; Heme Utilization/Adhesion Protein
Number of amino acids: Translated: 828; Mature: 828
Protein sequence:
>828_residues MKLTFVGFGVLSVICLSAVCNNSVHAQVTQDNTLNTSVTATTSVNGSNIYNITNGTRVGNNLFHSFSQFSIPTSDSVLFD NPTSIQNIFSRVTGGNVSNIDGLIQTNGSANLFLLNPTGIIFGSHASLNIGGSFVGTTAETITFADGSKFSSTDTNTSPL LTMNVPVGLQFGSNQGGITVQGTGHNAQLSDSVQVSGLNLNSRGLQLQPGKTLALLGKDIALDGGLLSAPGGLIELGGVT NGNVILNSTPQGFAFQYSQVPSFGNIQITQRALASTRDLNGESGGAIHIQGKRVSIRDGSMILVQNRSQKTAGDIAVDAS EFLEITGKSPDFQSSSSLVNESTALGAAGNIIINTPRLNIDQGGYIYNRTFSTASGGNIIVNTDETRVNGFAVGDPSAFR AVSQILAASYAGGKGGNISVSTQKLSVLAGGNIAARPYGVGSGGDVTVKADTIEVNNTGTPTGFYFSLISTATFGSGNAG NLAIDTRKLSVQAGGRVSASSIILGNAGVLNINASESIDVNGVKDANNPSYIGTAVRPFGTFAQISRANAGNTTINTPVL NVTNGATVFVENSGLGTAGTLQINANVLKLDNNASILASKKAGEGGNINLQLRDVLLMRRGSLINAEAGSNGNGGNININ SPIVIGLENSDIIANAVQGKGGNIQITTQGIIGLEYRNLLNPREVLSNDITASSQFSVSGTVQINNVGIDPNSGLIDLPT NLSDSSQQIATGCSNTNNSSFVATGRGGVPQNPMQEVRSDRPWSDIRDISAFHKTPALQAQILESPKVFVHATSWHRNAQ GKIELFAAKSPTGVQPSFTCASLAKSEL
Sequences:
>Translated_828_residues MKLTFVGFGVLSVICLSAVCNNSVHAQVTQDNTLNTSVTATTSVNGSNIYNITNGTRVGNNLFHSFSQFSIPTSDSVLFD NPTSIQNIFSRVTGGNVSNIDGLIQTNGSANLFLLNPTGIIFGSHASLNIGGSFVGTTAETITFADGSKFSSTDTNTSPL LTMNVPVGLQFGSNQGGITVQGTGHNAQLSDSVQVSGLNLNSRGLQLQPGKTLALLGKDIALDGGLLSAPGGLIELGGVT NGNVILNSTPQGFAFQYSQVPSFGNIQITQRALASTRDLNGESGGAIHIQGKRVSIRDGSMILVQNRSQKTAGDIAVDAS EFLEITGKSPDFQSSSSLVNESTALGAAGNIIINTPRLNIDQGGYIYNRTFSTASGGNIIVNTDETRVNGFAVGDPSAFR AVSQILAASYAGGKGGNISVSTQKLSVLAGGNIAARPYGVGSGGDVTVKADTIEVNNTGTPTGFYFSLISTATFGSGNAG NLAIDTRKLSVQAGGRVSASSIILGNAGVLNINASESIDVNGVKDANNPSYIGTAVRPFGTFAQISRANAGNTTINTPVL NVTNGATVFVENSGLGTAGTLQINANVLKLDNNASILASKKAGEGGNINLQLRDVLLMRRGSLINAEAGSNGNGGNININ SPIVIGLENSDIIANAVQGKGGNIQITTQGIIGLEYRNLLNPREVLSNDITASSQFSVSGTVQINNVGIDPNSGLIDLPT NLSDSSQQIATGCSNTNNSSFVATGRGGVPQNPMQEVRSDRPWSDIRDISAFHKTPALQAQILESPKVFVHATSWHRNAQ GKIELFAAKSPTGVQPSFTCASLAKSEL >Mature_828_residues MKLTFVGFGVLSVICLSAVCNNSVHAQVTQDNTLNTSVTATTSVNGSNIYNITNGTRVGNNLFHSFSQFSIPTSDSVLFD NPTSIQNIFSRVTGGNVSNIDGLIQTNGSANLFLLNPTGIIFGSHASLNIGGSFVGTTAETITFADGSKFSSTDTNTSPL LTMNVPVGLQFGSNQGGITVQGTGHNAQLSDSVQVSGLNLNSRGLQLQPGKTLALLGKDIALDGGLLSAPGGLIELGGVT NGNVILNSTPQGFAFQYSQVPSFGNIQITQRALASTRDLNGESGGAIHIQGKRVSIRDGSMILVQNRSQKTAGDIAVDAS EFLEITGKSPDFQSSSSLVNESTALGAAGNIIINTPRLNIDQGGYIYNRTFSTASGGNIIVNTDETRVNGFAVGDPSAFR AVSQILAASYAGGKGGNISVSTQKLSVLAGGNIAARPYGVGSGGDVTVKADTIEVNNTGTPTGFYFSLISTATFGSGNAG NLAIDTRKLSVQAGGRVSASSIILGNAGVLNINASESIDVNGVKDANNPSYIGTAVRPFGTFAQISRANAGNTTINTPVL NVTNGATVFVENSGLGTAGTLQINANVLKLDNNASILASKKAGEGGNINLQLRDVLLMRRGSLINAEAGSNGNGGNININ SPIVIGLENSDIIANAVQGKGGNIQITTQGIIGLEYRNLLNPREVLSNDITASSQFSVSGTVQINNVGIDPNSGLIDLPT NLSDSSQQIATGCSNTNNSSFVATGRGGVPQNPMQEVRSDRPWSDIRDISAFHKTPALQAQILESPKVFVHATSWHRNAQ GKIELFAAKSPTGVQPSFTCASLAKSEL
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85420; Mature: 85420
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTFVGFGVLSVICLSAVCNNSVHAQVTQDNTLNTSVTATTSVNGSNIYNITNGTRVGN CEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCH NLFHSFSQFSIPTSDSVLFDNPTSIQNIFSRVTGGNVSNIDGLIQTNGSANLFLLNPTGI HHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCEE IFGSHASLNIGGSFVGTTAETITFADGSKFSSTDTNTSPLLTMNVPVGLQFGSNQGGITV EEECCCEEEECCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCEEEEECCCCCCEEE QGTGHNAQLSDSVQVSGLNLNSRGLQLQPGKTLALLGKDIALDGGLLSAPGGLIELGGVT EECCCCCEECCCEEEEEEEECCCCEEECCCCEEEEECCEEEECCCEEECCCCEEEECCCC NGNVILNSTPQGFAFQYSQVPSFGNIQITQRALASTRDLNGESGGAIHIQGKRVSIRDGS CCCEEEECCCCCCEEEECCCCCCCCEEEEHHHHHHHCCCCCCCCCEEEEECCEEEEECCC MILVQNRSQKTAGDIAVDASEFLEITGKSPDFQSSSSLVNESTALGAAGNIIINTPRLNI EEEEECCCCCCCCCEEECHHHHHEECCCCCCCCCCHHHHCCCCCCCCCCCEEEECCEEEE DQGGYIYNRTFSTASGGNIIVNTDETRVNGFAVGDPSAFRAVSQILAASYAGGKGGNISV CCCCEEEEEEECCCCCCEEEEECCCCEECEEEECCCHHHHHHHHHHHHHCCCCCCCEEEE STQKLSVLAGGNIAARPYGVGSGGDVTVKADTIEVNNTGTPTGFYFSLISTATFGSGNAG EEEEEEEEECCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCHHEEEEEHHEECCCCCCC NLAIDTRKLSVQAGGRVSASSIILGNAGVLNINASESIDVNGVKDANNPSYIGTAVRPFG CEEEEEEEEEEECCCCEEEEEEEEECCCEEEECCCCCEECCCCCCCCCCCEEEEECCCCC TFAQISRANAGNTTINTPVLNVTNGATVFVENSGLGTAGTLQINANVLKLDNNASILASK CHHHHHCCCCCCCEECCCEEEECCCEEEEEECCCCCCEEEEEEEEEEEEECCCCEEEEEC KAGEGGNINLQLRDVLLMRRGSLINAEAGSNGNGGNININSPIVIGLENSDIIANAVQGK CCCCCCEEEEEEEEEEEHHCCCEEEECCCCCCCCCEEEECCCEEEEECCCCEEEEEECCC GGNIQITTQGIIGLEYRNLLNPREVLSNDITASSQFSVSGTVQINNVGIDPNSGLIDLPT CCEEEEEECCEEEEHHHHCCCHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCEEECCC NLSDSSQQIATGCSNTNNSSFVATGRGGVPQNPMQEVRSDRPWSDIRDISAFHKTPALQA CCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCHHH QILESPKVFVHATSWHRNAQGKIELFAAKSPTGVQPSFTCASLAKSEL HHHCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKLTFVGFGVLSVICLSAVCNNSVHAQVTQDNTLNTSVTATTSVNGSNIYNITNGTRVGN CEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCCCCH NLFHSFSQFSIPTSDSVLFDNPTSIQNIFSRVTGGNVSNIDGLIQTNGSANLFLLNPTGI HHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEECCCEE IFGSHASLNIGGSFVGTTAETITFADGSKFSSTDTNTSPLLTMNVPVGLQFGSNQGGITV EEECCCEEEECCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEECCEEEEECCCCCCEEE QGTGHNAQLSDSVQVSGLNLNSRGLQLQPGKTLALLGKDIALDGGLLSAPGGLIELGGVT EECCCCCEECCCEEEEEEEECCCCEEECCCCEEEEECCEEEECCCEEECCCCEEEECCCC NGNVILNSTPQGFAFQYSQVPSFGNIQITQRALASTRDLNGESGGAIHIQGKRVSIRDGS CCCEEEECCCCCCEEEECCCCCCCCEEEEHHHHHHHCCCCCCCCCEEEEECCEEEEECCC MILVQNRSQKTAGDIAVDASEFLEITGKSPDFQSSSSLVNESTALGAAGNIIINTPRLNI EEEEECCCCCCCCCEEECHHHHHEECCCCCCCCCCHHHHCCCCCCCCCCCEEEECCEEEE DQGGYIYNRTFSTASGGNIIVNTDETRVNGFAVGDPSAFRAVSQILAASYAGGKGGNISV CCCCEEEEEEECCCCCCEEEEECCCCEECEEEECCCHHHHHHHHHHHHHCCCCCCCEEEE STQKLSVLAGGNIAARPYGVGSGGDVTVKADTIEVNNTGTPTGFYFSLISTATFGSGNAG EEEEEEEEECCCEEECCCCCCCCCEEEEEEEEEEECCCCCCCHHEEEEEHHEECCCCCCC NLAIDTRKLSVQAGGRVSASSIILGNAGVLNINASESIDVNGVKDANNPSYIGTAVRPFG CEEEEEEEEEEECCCCEEEEEEEEECCCEEEECCCCCEECCCCCCCCCCCEEEEECCCCC TFAQISRANAGNTTINTPVLNVTNGATVFVENSGLGTAGTLQINANVLKLDNNASILASK CHHHHHCCCCCCCEECCCEEEECCCEEEEEECCCCCCEEEEEEEEEEEEECCCCEEEEEC KAGEGGNINLQLRDVLLMRRGSLINAEAGSNGNGGNININSPIVIGLENSDIIANAVQGK CCCCCCEEEEEEEEEEEHHCCCEEEECCCCCCCCCEEEECCCEEEEECCCCEEEEEECCC GGNIQITTQGIIGLEYRNLLNPREVLSNDITASSQFSVSGTVQINNVGIDPNSGLIDLPT CCEEEEEECCEEEEHHHHCCCHHHHHHCCCCCCCEEEEEEEEEEEEECCCCCCCEEECCC NLSDSSQQIATGCSNTNNSSFVATGRGGVPQNPMQEVRSDRPWSDIRDISAFHKTPALQA CCCCCCHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCHHH QILESPKVFVHATSWHRNAQGKIELFAAKSPTGVQPSFTCASLAKSEL HHHCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA