| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232461
Identifier: 17232461
GI number: 17232461
Start: 5931570
End: 5933126
Strand: Reverse
Name: 17232461
Synonym: all4969
Alternate gene names: NA
Gene position: 5933126-5931570 (Counterclockwise)
Preceding gene: 17232462
Following gene: 17232460
Centisome position: 92.51
GC content: 43.03
Gene sequence:
>1557_bases ATGTACACAACATCTCAACCAGACCCCGTTAGGTTAGAAATATTCAAAAACCTCTATCAATTCATCGCCGAACAAATGGG GATTGTTCTACAAAATACTGCCGCATCAGTCAATATTAAAGAAAGACTAGATTTCTCCTGCGCTATTTTTGATTCATCAG GATTATTAGTCGCTAACGCCCCTCATATTCCTGTACATTTGGGGTCAATGAGTGAAAGCGTCTGTAGTTTAATTAATGAT AAAGGCGAAACCATCAAGCCAGGGAATGTCTATCTATCTAATAATCCCTATAACGGCGGAACCCACCTCCCAGATGTCAC AGCCATTACCCCCGTCTTCCCAGAAACTCAAGAAAATCCCCCGACACCATTATTTTACGTTGCTTCTCGCGGACATCAAG CTGATATTGGTGGGATTACTCCCGGTTCCATGCCTCCCCACAGTACTACAGTAGAAGAAGAAGGTATTCTTTTTGATAAT TTTCTCTTAGTTGAAGCCGGAAATTTTCAGGAAATTCAAGTTAGAAACTTGCTGGCAAATCATCTTTATCCTGCCCGTAA TCCTGACCAAAATATTGCTGATTTTCAGGCACAAATCGCCGCCAATGAAAGGGGAGTTAAAGAACTACATAAAATGGTGG CTCAATATGGATTGCCAATAGTCCAAGTATATATGAAATTTGTCCAAGATAATGCGGGAGAGTCAGTAAGACGGGCAATT GATGTCCTCAAAGATGGCACGTTTATTTATGAAATGGATGGCGGCGCTAAAATCCAAGTCAAAGTAACTATAAATAGAGA AAAGCGTAGTGCAGAAATTGATTTCACTGGCACATCTGAACAATTAAATAGTAACTTTAATGCTCCCAAAGCAGTCACCC AAGCAGCAGTTTTATATGTCTTCCGGACGCTGGTTGATGATAATATTCCCCTCAATGCTGGGTGTCTTAAACCTTTAGAC ATTATCGTTCCTGAAGGATGTATGTTAAATCCAACTTACCCCAGTGCAGTAGTAGCAGGTAATGTGGAAACGTCCCAAAC CATCGTTGATGCTTTATATGGTGCGCTGAGTGTGATGGCTGCTTCTCAAGGAACCATGAATAATTTTACCTTTGGGAGCG ATCGCTATCAATATTATGAAACAATCTGCGGTGGTTCCGGCGCAGGCTCTAACTTTGATGGTACCGACGCAGTTCATACC CACATGACTAACTCTCTCCTCACTGACCCAGAAGTATTAGAAACTCGTTACCCTGTACTTGTGGAAAGCTTTAGTCTGCG TTCTGACAGTGGAGGTAAAGGAAAATATTCCGGCGGTAATGGAGTCGTGCGCCGCATCCGCTTTTTAGAACCCATGACAG CGAATATTCTCTCTGGACATCGCTTAGTTCCTCCCTTTGGGTTAAATGGTGGAGAAGCCGGACAAGTGGGACACAACCGG ATAGAACGTCACGACGGAACCCAAGAAAATTTAGATAGTACCGCCACAGCAGAAATGCAGCCTGGGGATGTTTTTGTCAT AGAAACCCCTGGAGGCGGTGGATTTGGTTCAAAATGA
Upstream 100 bases:
>100_bases AGTCTAGAAACTGATATTTTTGACTCAGCATTCGTTACTTTCTTGGAAACTGCTAGTTTTAAAAACTAAAATTTGACAAT ATTTTTGGAACATATTAACA
Downstream 100 bases:
>100_bases AAGGTAATAGGGGAGGAACTGATGACTGTTGACAACTGACAATTGACAAATAACAACTGTTACATTAAATATCAGCAAAT AGTATGTTAGGTTATTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MYTTSQPDPVRLEIFKNLYQFIAEQMGIVLQNTAASVNIKERLDFSCAIFDSSGLLVANAPHIPVHLGSMSESVCSLIND KGETIKPGNVYLSNNPYNGGTHLPDVTAITPVFPETQENPPTPLFYVASRGHQADIGGITPGSMPPHSTTVEEEGILFDN FLLVEAGNFQEIQVRNLLANHLYPARNPDQNIADFQAQIAANERGVKELHKMVAQYGLPIVQVYMKFVQDNAGESVRRAI DVLKDGTFIYEMDGGAKIQVKVTINREKRSAEIDFTGTSEQLNSNFNAPKAVTQAAVLYVFRTLVDDNIPLNAGCLKPLD IIVPEGCMLNPTYPSAVVAGNVETSQTIVDALYGALSVMAASQGTMNNFTFGSDRYQYYETICGGSGAGSNFDGTDAVHT HMTNSLLTDPEVLETRYPVLVESFSLRSDSGGKGKYSGGNGVVRRIRFLEPMTANILSGHRLVPPFGLNGGEAGQVGHNR IERHDGTQENLDSTATAEMQPGDVFVIETPGGGGFGSK
Sequences:
>Translated_518_residues MYTTSQPDPVRLEIFKNLYQFIAEQMGIVLQNTAASVNIKERLDFSCAIFDSSGLLVANAPHIPVHLGSMSESVCSLIND KGETIKPGNVYLSNNPYNGGTHLPDVTAITPVFPETQENPPTPLFYVASRGHQADIGGITPGSMPPHSTTVEEEGILFDN FLLVEAGNFQEIQVRNLLANHLYPARNPDQNIADFQAQIAANERGVKELHKMVAQYGLPIVQVYMKFVQDNAGESVRRAI DVLKDGTFIYEMDGGAKIQVKVTINREKRSAEIDFTGTSEQLNSNFNAPKAVTQAAVLYVFRTLVDDNIPLNAGCLKPLD IIVPEGCMLNPTYPSAVVAGNVETSQTIVDALYGALSVMAASQGTMNNFTFGSDRYQYYETICGGSGAGSNFDGTDAVHT HMTNSLLTDPEVLETRYPVLVESFSLRSDSGGKGKYSGGNGVVRRIRFLEPMTANILSGHRLVPPFGLNGGEAGQVGHNR IERHDGTQENLDSTATAEMQPGDVFVIETPGGGGFGSK >Mature_518_residues MYTTSQPDPVRLEIFKNLYQFIAEQMGIVLQNTAASVNIKERLDFSCAIFDSSGLLVANAPHIPVHLGSMSESVCSLIND KGETIKPGNVYLSNNPYNGGTHLPDVTAITPVFPETQENPPTPLFYVASRGHQADIGGITPGSMPPHSTTVEEEGILFDN FLLVEAGNFQEIQVRNLLANHLYPARNPDQNIADFQAQIAANERGVKELHKMVAQYGLPIVQVYMKFVQDNAGESVRRAI DVLKDGTFIYEMDGGAKIQVKVTINREKRSAEIDFTGTSEQLNSNFNAPKAVTQAAVLYVFRTLVDDNIPLNAGCLKPLD IIVPEGCMLNPTYPSAVVAGNVETSQTIVDALYGALSVMAASQGTMNNFTFGSDRYQYYETICGGSGAGSNFDGTDAVHT HMTNSLLTDPEVLETRYPVLVESFSLRSDSGGKGKYSGGNGVVRRIRFLEPMTANILSGHRLVPPFGLNGGEAGQVGHNR IERHDGTQENLDSTATAEMQPGDVFVIETPGGGGFGSK
Specific function: Unknown
COG id: COG0146
COG function: function code EQ; N-methylhydantoinase B/acetone carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxoprolinase family [H]
Homologues:
Organism=Homo sapiens, GI48314820, Length=526, Percent_Identity=48.4790874524715, Blast_Score=477, Evalue=1e-134, Organism=Caenorhabditis elegans, GI133901900, Length=532, Percent_Identity=48.3082706766917, Blast_Score=486, Evalue=1e-137, Organism=Caenorhabditis elegans, GI133901902, Length=499, Percent_Identity=47.0941883767535, Blast_Score=442, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6322634, Length=540, Percent_Identity=47.7777777777778, Blast_Score=479, Evalue=1e-136, Organism=Drosophila melanogaster, GI45550492, Length=525, Percent_Identity=49.5238095238095, Blast_Score=499, Evalue=1e-141,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003692 [H]
Pfam domain/function: PF02538 Hydantoinase_B [H]
EC number: NA
Molecular weight: Translated: 56002; Mature: 56002
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTTSQPDPVRLEIFKNLYQFIAEQMGIVLQNTAASVNIKERLDFSCAIFDSSGLLVANA CCCCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCEEHHHHCCEEEEEECCCCEEEECC PHIPVHLGSMSESVCSLINDKGETIKPGNVYLSNNPYNGGTHLPDVTAITPVFPETQENP CCCEEEECCHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCC PTPLFYVASRGHQADIGGITPGSMPPHSTTVEEEGILFDNFLLVEAGNFQEIQVRNLLAN CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHH HLYPARNPDQNIADFQAQIAANERGVKELHKMVAQYGLPIVQVYMKFVQDNAGESVRRAI HCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH DVLKDGTFIYEMDGGAKIQVKVTINREKRSAEIDFTGTSEQLNSNFNAPKAVTQAAVLYV HHHHCCCEEEEECCCCEEEEEEEECCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHH FRTLVDDNIPLNAGCLKPLDIIVPEGCMLNPTYPSAVVAGNVETSQTIVDALYGALSVMA HHHHHCCCCCCCCCCCCCEEEECCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHH ASQGTMNNFTFGSDRYQYYETICGGSGAGSNFDGTDAVHTHMTNSLLTDPEVLETRYPVL HCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCE VESFSLRSDSGGKGKYSGGNGVVRRIRFLEPMTANILSGHRLVPPFGLNGGEAGQVGHNR EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCEECCCCCCCCCCCCCCCHHH IERHDGTQENLDSTATAEMQPGDVFVIETPGGGGFGSK HHHCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure MYTTSQPDPVRLEIFKNLYQFIAEQMGIVLQNTAASVNIKERLDFSCAIFDSSGLLVANA CCCCCCCCCCHHHHHHHHHHHHHHHHCEEEECCCCCEEHHHHCCEEEEEECCCCEEEECC PHIPVHLGSMSESVCSLINDKGETIKPGNVYLSNNPYNGGTHLPDVTAITPVFPETQENP CCCEEEECCHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCC PTPLFYVASRGHQADIGGITPGSMPPHSTTVEEEGILFDNFLLVEAGNFQEIQVRNLLAN CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCHHHHHHHHH HLYPARNPDQNIADFQAQIAANERGVKELHKMVAQYGLPIVQVYMKFVQDNAGESVRRAI HCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH DVLKDGTFIYEMDGGAKIQVKVTINREKRSAEIDFTGTSEQLNSNFNAPKAVTQAAVLYV HHHHCCCEEEEECCCCEEEEEEEECCCCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHH FRTLVDDNIPLNAGCLKPLDIIVPEGCMLNPTYPSAVVAGNVETSQTIVDALYGALSVMA HHHHHCCCCCCCCCCCCCEEEECCCCCEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHH ASQGTMNNFTFGSDRYQYYETICGGSGAGSNFDGTDAVHTHMTNSLLTDPEVLETRYPVL HCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCCE VESFSLRSDSGGKGKYSGGNGVVRRIRFLEPMTANILSGHRLVPPFGLNGGEAGQVGHNR EEEECCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCEECCCCCCCCCCCCCCCHHH IERHDGTQENLDSTATAEMQPGDVFVIETPGGGGFGSK HHHCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]