| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232454
Identifier: 17232454
GI number: 17232454
Start: 5920609
End: 5921871
Strand: Reverse
Name: 17232454
Synonym: all4962
Alternate gene names: NA
Gene position: 5921871-5920609 (Counterclockwise)
Preceding gene: 17232455
Following gene: 17232452
Centisome position: 92.33
GC content: 44.73
Gene sequence:
>1263_bases ATGACAACATCGGTAGCGGATAAAACTCCCACTCCCGCTAAAGTCTGGCGGAGACATAATGATCCACCTGGTCTATGGTT TGCTGTAGCTATAGGTTCAGCTTCACTCCACTTATTAGCTTTTTGGTTAATACGTTCATCTAGTACTGTGGGTTTGTGGT TTCCACCGCAAGATCAAAGTGTTGTCCCTATAGAGTTGATAGAAGTTACACCTCAGACTAACTCTACAGATGAACCTGCT TCGTCACCACCTCAACAGTCTGTACCAAACACTACCACAACACAACCACCACAAACTTCCATAAATCAGGATGCTGAGAT TGTAAATTCTGGTGAGCAATCCCAGCAGGAAAATAATAATGTTGCTCAATCTAAGGTGAAAGTTTTTCCTCAATCGGTAT CTACACCAACTACAGAACCAGAACCTACACCTACACCTACCACAGAAGCAGAACCCACTCCTACACCAACCACAGAAACA GAACCCACTCCTACTCCAACAGTTCCTGTAGGTGAACTTCCTTGGAATCGTCGTGAAGAAATCGAACTGGGACAGGGAAA ACCCCTACCTTCAGATATTCCACCTGTTACACCGGAACAAGTACAAGAGTCGGAAGCAGTAGAAGACAAAACTCCGCGAG ATGAAGAAGACACCCCAGATACATCCTCTGGAGAAACTGCAAACACTCCAACGCAGGATAACCCAGCTAATGCTAACGGT GAAACGGCAAACACTCCATCTGGGGACAATTCACCAACCCCAACAGGAGAAACTGCAAAAATTCCTACTGAGCAATATAC ACCAACTCCAACAGAAGAACCTGCAAACACCCCCACTGAGGATAATGCAAATTCTACCGCCAGGGGAGCGATCACCTCCG GTGGGCGGAACGCCATCGCCACATTGACTCCTCTGGCAGAGTCAGAAGCACGTCAATTAGTCAATGATTTACCAGAAGTC TTGTCTGCATACCAAGGAAGTAGTTCAAAAACTGTAGACTCTAGCTATCTTCCTGGCGATTCTCCAATTAAGCCGACACA GTTACTAGCCAGTTTGGTAATTGATAAAAATGGTAACTTCCAACAGGCGATCGTGATCAACATAGAGCCAGCAAGTTTAC AAGCTGAGAAAAGCTTATATGAGCAACTTATTGGTGATTTGTTCAAAAACGAAAGCTTTACTCCTGGACATAATCGGGAT GGAAGCAAACCAGACTTCAGTAATTTTTTTGTCAGAGTGACAATAGAGCCAACTGGTCAATAG
Upstream 100 bases:
>100_bases CAGTTCTGACTTTTGCTGTGAAATCAGAATTAATGGTTAACCGTTAATATTCACCTAGATTCACTAGCAATAGCTCCGAA TCATATATTTATATCTAAAT
Downstream 100 bases:
>100_bases TCGCGTCGCTGACTCTAGGTCTTCACCTGATGATTATCTACGAATGTATAATTTGGGTGTGGAGGTAATAGCATGACCCA AGCATTGACCAAATTATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTTSVADKTPTPAKVWRRHNDPPGLWFAVAIGSASLHLLAFWLIRSSSTVGLWFPPQDQSVVPIELIEVTPQTNSTDEPA SSPPQQSVPNTTTTQPPQTSINQDAEIVNSGEQSQQENNNVAQSKVKVFPQSVSTPTTEPEPTPTPTTEAEPTPTPTTET EPTPTPTVPVGELPWNRREEIELGQGKPLPSDIPPVTPEQVQESEAVEDKTPRDEEDTPDTSSGETANTPTQDNPANANG ETANTPSGDNSPTPTGETAKIPTEQYTPTPTEEPANTPTEDNANSTARGAITSGGRNAIATLTPLAESEARQLVNDLPEV LSAYQGSSSKTVDSSYLPGDSPIKPTQLLASLVIDKNGNFQQAIVINIEPASLQAEKSLYEQLIGDLFKNESFTPGHNRD GSKPDFSNFFVRVTIEPTGQ
Sequences:
>Translated_420_residues MTTSVADKTPTPAKVWRRHNDPPGLWFAVAIGSASLHLLAFWLIRSSSTVGLWFPPQDQSVVPIELIEVTPQTNSTDEPA SSPPQQSVPNTTTTQPPQTSINQDAEIVNSGEQSQQENNNVAQSKVKVFPQSVSTPTTEPEPTPTPTTEAEPTPTPTTET EPTPTPTVPVGELPWNRREEIELGQGKPLPSDIPPVTPEQVQESEAVEDKTPRDEEDTPDTSSGETANTPTQDNPANANG ETANTPSGDNSPTPTGETAKIPTEQYTPTPTEEPANTPTEDNANSTARGAITSGGRNAIATLTPLAESEARQLVNDLPEV LSAYQGSSSKTVDSSYLPGDSPIKPTQLLASLVIDKNGNFQQAIVINIEPASLQAEKSLYEQLIGDLFKNESFTPGHNRD GSKPDFSNFFVRVTIEPTGQ >Mature_419_residues TTSVADKTPTPAKVWRRHNDPPGLWFAVAIGSASLHLLAFWLIRSSSTVGLWFPPQDQSVVPIELIEVTPQTNSTDEPAS SPPQQSVPNTTTTQPPQTSINQDAEIVNSGEQSQQENNNVAQSKVKVFPQSVSTPTTEPEPTPTPTTEAEPTPTPTTETE PTPTPTVPVGELPWNRREEIELGQGKPLPSDIPPVTPEQVQESEAVEDKTPRDEEDTPDTSSGETANTPTQDNPANANGE TANTPSGDNSPTPTGETAKIPTEQYTPTPTEEPANTPTEDNANSTARGAITSGGRNAIATLTPLAESEARQLVNDLPEVL SAYQGSSSKTVDSSYLPGDSPIKPTQLLASLVIDKNGNFQQAIVINIEPASLQAEKSLYEQLIGDLFKNESFTPGHNRDG SKPDFSNFFVRVTIEPTGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44956; Mature: 44825
Theoretical pI: Translated: 3.99; Mature: 3.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSVADKTPTPAKVWRRHNDPPGLWFAVAIGSASLHLLAFWLIRSSSTVGLWFPPQDQS CCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCC VVPIELIEVTPQTNSTDEPASSPPQQSVPNTTTTQPPQTSINQDAEIVNSGEQSQQENNN CCEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHCCH VAQSKVKVFPQSVSTPTTEPEPTPTPTTEAEPTPTPTTETEPTPTPTVPVGELPWNRREE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IELGQGKPLPSDIPPVTPEQVQESEAVEDKTPRDEEDTPDTSSGETANTPTQDNPANANG CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ETANTPSGDNSPTPTGETAKIPTEQYTPTPTEEPANTPTEDNANSTARGAITSGGRNAIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE TLTPLAESEARQLVNDLPEVLSAYQGSSSKTVDSSYLPGDSPIKPTQLLASLVIDKNGNF EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE QQAIVINIEPASLQAEKSLYEQLIGDLFKNESFTPGHNRDGSKPDFSNFFVRVTIEPTGQ EEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure TTSVADKTPTPAKVWRRHNDPPGLWFAVAIGSASLHLLAFWLIRSSSTVGLWFPPQDQS CCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCC VVPIELIEVTPQTNSTDEPASSPPQQSVPNTTTTQPPQTSINQDAEIVNSGEQSQQENNN CCEEEEEEECCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHCCH VAQSKVKVFPQSVSTPTTEPEPTPTPTTEAEPTPTPTTETEPTPTPTVPVGELPWNRREE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IELGQGKPLPSDIPPVTPEQVQESEAVEDKTPRDEEDTPDTSSGETANTPTQDNPANANG CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ETANTPSGDNSPTPTGETAKIPTEQYTPTPTEEPANTPTEDNANSTARGAITSGGRNAIA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE TLTPLAESEARQLVNDLPEVLSAYQGSSSKTVDSSYLPGDSPIKPTQLLASLVIDKNGNF EECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE QQAIVINIEPASLQAEKSLYEQLIGDLFKNESFTPGHNRDGSKPDFSNFFVRVTIEPTGQ EEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA