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The map label for this gene is ydaM [H]

Identifier: 17232425

GI number: 17232425

Start: 5886142

End: 5887548

Strand: Reverse

Name: ydaM [H]

Synonym: all4933

Alternate gene names: 17232425

Gene position: 5887548-5886142 (Counterclockwise)

Preceding gene: 17232427

Following gene: 17232423

Centisome position: 91.8

GC content: 46.27

Gene sequence:

>1407_bases
ATGCCAGCGAATTCCTGGCCCGACAACGATTCCTACAAAGAGCTTGATCCACTCAATTCCTTGTTGTCTGACGTATCAAC
AACAGAGGAATCAGTAGTGGAAACACGGGATTTGTCTCTACCATCCCGGTTTCAAGGACGTAGAGGGAAAGCTGCTCTAG
TTTTAACAATCGTCTGGAGTGGCACGATCGCTCTACATTTGGTTTCCTGGGGTTCTATTTTTATACTAGGGTTGACTACC
GTTTTAGGTATTCATGCTTTAGGAGTAGTTTTTGCTCGACCCCGCCACTATCAAAAAGAGATTCAGGGTAGTTTACCTTT
TGTATCTATATTGGTAGCCGCGAAAAATGAGGAAGCTGTCATTGCTAAATTAGCGAAAAATCTTTGTAATCTGGAATATC
CCAACGGGCAATACGAAGTTTGGATAATTGATGATAATAGTACCGATAAAACACCCCATATCCTAGCAGAACTGGCAAAA
GAGTACGACAAACTAAAAGTCCTCAGACGTTCAGCCCAAGCTACTGGTGGTAAATCAGGGGCGTTAAATCAGGTTTTACC
ATTAACTCAAGGTGAAATCATCGCCGTGTTTGATGCTGATGCTCAAGTGGCATCAGATATGCTACTCCATGTAGTACCTT
TGTTTCAACGGGAAAAGGTGGGGGCGGTGCAGGTGCGAAAAGCGATCGCCAACGCCAAAGAAAATTTTTGGACAAAGGGG
CAAATGGCGGAAATGTCGCTGGATATTTGGTTCCAGCAACAGCGTACAGCCCTGGGAGGAATCGGTGAACTGCGAGGGAA
TGGTCAATTTGTGCGCCGCCAAGCCTTGGACAGCTGCGGCGGTTGGAATGAAGAAACAATCACTGATGATTTGGATCTAA
CTTTCCGCCTGCATCTTGACAAATGGGATATTGAATGCTTGTTCTATCCAGCCGTACAGGAAGAAGGCGTAACAACGGCG
ATCGCTCTTTGGCATCAGCGCAATCGCTGGGCGGAAGGTGGCTATCAGCGCTATTTGGACTATTGGGATTTGATTCTCAA
AAACCGCATGGGTACGCGGAAAACTTGGGATATGTTGATGTTCATGCTGACAATGTATATCTTGCCAACAGCAGCAATTC
CCGATTTATTAATGGCTCTCACCCGTCATCGTCCGCCAATGCTAGGCCCAGTAACAGGCTTGTCTGTCACGATGTCTGTC
GTCGGAATGTTTGCTGGTTTACGGCGCATACGACAAGAACAAAAGTTTCAAGTTCATACCCCCTTTGTTTTGTTACTACA
AACAATGCGCGGCACATTATATATGCTGCACTGGTTAGTAGTCATGAGCAGCACCACAGCGCGGATGTCATTCCGACCCA
AGCGCTTGAAGTGGGTAAAAACTGTGCATACAGGGACTGGCGAATAG

Upstream 100 bases:

>100_bases
ACGACTAACGAATGATAGTGATAAAGGAAGTTACTACTAAGAAATATTAAAATCTCGGTTAAAATAGGGCAGCATTAGCT
TTTTTTGGATCAAGTAACTT

Downstream 100 bases:

>100_bases
TCCCTACGGGAAATTCAAAATGCAAAATGCAAAATTCAGTTTGGATTTTGCATTTTTTTTGTTAGTTGTCCATAGTCAAT
TTTCTGTCCCCCTACCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MPANSWPDNDSYKELDPLNSLLSDVSTTEESVVETRDLSLPSRFQGRRGKAALVLTIVWSGTIALHLVSWGSIFILGLTT
VLGIHALGVVFARPRHYQKEIQGSLPFVSILVAAKNEEAVIAKLAKNLCNLEYPNGQYEVWIIDDNSTDKTPHILAELAK
EYDKLKVLRRSAQATGGKSGALNQVLPLTQGEIIAVFDADAQVASDMLLHVVPLFQREKVGAVQVRKAIANAKENFWTKG
QMAEMSLDIWFQQQRTALGGIGELRGNGQFVRRQALDSCGGWNEETITDDLDLTFRLHLDKWDIECLFYPAVQEEGVTTA
IALWHQRNRWAEGGYQRYLDYWDLILKNRMGTRKTWDMLMFMLTMYILPTAAIPDLLMALTRHRPPMLGPVTGLSVTMSV
VGMFAGLRRIRQEQKFQVHTPFVLLLQTMRGTLYMLHWLVVMSSTTARMSFRPKRLKWVKTVHTGTGE

Sequences:

>Translated_468_residues
MPANSWPDNDSYKELDPLNSLLSDVSTTEESVVETRDLSLPSRFQGRRGKAALVLTIVWSGTIALHLVSWGSIFILGLTT
VLGIHALGVVFARPRHYQKEIQGSLPFVSILVAAKNEEAVIAKLAKNLCNLEYPNGQYEVWIIDDNSTDKTPHILAELAK
EYDKLKVLRRSAQATGGKSGALNQVLPLTQGEIIAVFDADAQVASDMLLHVVPLFQREKVGAVQVRKAIANAKENFWTKG
QMAEMSLDIWFQQQRTALGGIGELRGNGQFVRRQALDSCGGWNEETITDDLDLTFRLHLDKWDIECLFYPAVQEEGVTTA
IALWHQRNRWAEGGYQRYLDYWDLILKNRMGTRKTWDMLMFMLTMYILPTAAIPDLLMALTRHRPPMLGPVTGLSVTMSV
VGMFAGLRRIRQEQKFQVHTPFVLLLQTMRGTLYMLHWLVVMSSTTARMSFRPKRLKWVKTVHTGTGE
>Mature_467_residues
PANSWPDNDSYKELDPLNSLLSDVSTTEESVVETRDLSLPSRFQGRRGKAALVLTIVWSGTIALHLVSWGSIFILGLTTV
LGIHALGVVFARPRHYQKEIQGSLPFVSILVAAKNEEAVIAKLAKNLCNLEYPNGQYEVWIIDDNSTDKTPHILAELAKE
YDKLKVLRRSAQATGGKSGALNQVLPLTQGEIIAVFDADAQVASDMLLHVVPLFQREKVGAVQVRKAIANAKENFWTKGQ
MAEMSLDIWFQQQRTALGGIGELRGNGQFVRRQALDSCGGWNEETITDDLDLTFRLHLDKWDIECLFYPAVQEEGVTTAI
ALWHQRNRWAEGGYQRYLDYWDLILKNRMGTRKTWDMLMFMLTMYILPTAAIPDLLMALTRHRPPMLGPVTGLSVTMSVV
GMFAGLRRIRQEQKFQVHTPFVLLLQTMRGTLYMLHWLVVMSSTTARMSFRPKRLKWVKTVHTGTGE

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=239, Percent_Identity=29.7071129707113, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 52829; Mature: 52698

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPANSWPDNDSYKELDPLNSLLSDVSTTEESVVETRDLSLPSRFQGRRGKAALVLTIVWS
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCCCCEEEEEEEEEC
GTIALHLVSWGSIFILGLTTVLGIHALGVVFARPRHYQKEIQGSLPFVSILVAAKNEEAV
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCHHH
IAKLAKNLCNLEYPNGQYEVWIIDDNSTDKTPHILAELAKEYDKLKVLRRSAQATGGKSG
HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ALNQVLPLTQGEIIAVFDADAQVASDMLLHVVPLFQREKVGAVQVRKAIANAKENFWTKG
CCHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
QMAEMSLDIWFQQQRTALGGIGELRGNGQFVRRQALDSCGGWNEETITDDLDLTFRLHLD
CHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
KWDIECLFYPAVQEEGVTTAIALWHQRNRWAEGGYQRYLDYWDLILKNRMGTRKTWDMLM
CCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
FMLTMYILPTAAIPDLLMALTRHRPPMLGPVTGLSVTMSVVGMFAGLRRIRQEQKFQVHT
HHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC
PFVLLLQTMRGTLYMLHWLVVMSSTTARMSFRPKRLKWVKTVHTGTGE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PANSWPDNDSYKELDPLNSLLSDVSTTEESVVETRDLSLPSRFQGRRGKAALVLTIVWS
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHCCCCCCEEEEEEEEEC
GTIALHLVSWGSIFILGLTTVLGIHALGVVFARPRHYQKEIQGSLPFVSILVAAKNEEAV
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEECCCCHHH
IAKLAKNLCNLEYPNGQYEVWIIDDNSTDKTPHILAELAKEYDKLKVLRRSAQATGGKSG
HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ALNQVLPLTQGEIIAVFDADAQVASDMLLHVVPLFQREKVGAVQVRKAIANAKENFWTKG
CCHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
QMAEMSLDIWFQQQRTALGGIGELRGNGQFVRRQALDSCGGWNEETITDDLDLTFRLHLD
CHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC
KWDIECLFYPAVQEEGVTTAIALWHQRNRWAEGGYQRYLDYWDLILKNRMGTRKTWDMLM
CCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHH
FMLTMYILPTAAIPDLLMALTRHRPPMLGPVTGLSVTMSVVGMFAGLRRIRQEQKFQVHT
HHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECC
PFVLLLQTMRGTLYMLHWLVVMSSTTARMSFRPKRLKWVKTVHTGTGE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]