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The map label for this gene is rcsC [C]

Identifier: 17232419

GI number: 17232419

Start: 5878468

End: 5878941

Strand: Reverse

Name: rcsC [C]

Synonym: all4927

Alternate gene names: 17232419

Gene position: 5878941-5878468 (Counterclockwise)

Preceding gene: 17232420

Following gene: 17232418

Centisome position: 91.66

GC content: 35.23

Gene sequence:

>474_bases
ATGAATAACATACTTGTGTCAAATTGCCCTAAGAATACGCATTTTATAGACGATATTAGAGACTTAAATGTTTTCAAAGA
ATTAACAATTTTGATGGTGGATGATGATGAGAATATGCGGTTTTTAATTGCTGAGATTTTTGAAATCTATGGAACTAAGG
TGATGACAGCAACTAATCCCTTAGAAGCATTTGAGTTAATTAGAAAAATCAAACTTGATCTGTTGATTAGCGACATTAAT
ATGCCAGAAAGAAATGGCTATTGGTTAATCCAACAAGTCAGAACGCTGACAGATTCAAAAAATAGAGAAATTCCGGCGAT
CGCTTTTACTGGGGATGCTGGACTTAACATACAGAAAAAGGCTATTGCTGCTGGATTTCAAACGTGTATCTGCAAGACTT
CAACCATAGAGCAATTAGTCACAGAAATAACAAAACTGCTGAAGCCTAGCTGGAAATTAAGGCGTGAGGAATAA

Upstream 100 bases:

>100_bases
CATTTATTTACTGACGTACTACAACACTCATTTATTAATGACATGGTAGTAGCAGATAGCTCATTAACAGGAATGCAAAT
CTCATCTTTGAACAAAGATC

Downstream 100 bases:

>100_bases
CGAGAAAAATCTTGATTCCCACAATAATTATTTACACCGACCTACCTATGTGTATTGCCAACCGTATCATGGTTACTGTA
GAGACAATAGACCGACATTA

Product: two-component response regulator

Products: NA

Alternate protein names: PAS/PAC Sensor Hybrid Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Response Regulator Receiver Protein; Signal Transduction Histidine Kinase; GAF Sensor Hybrid Histidine Kinase; Two-Component Response Regulator; Sensor Protein; PAS/PAC Sensor Protein; Response Regulator Receiver Domain-Containing Protein; Sensory Box Histidine Kinase/Response Regulator; PAS Fold Family; Integral Membrane Sensor Hybrid Histidine Kinase; Response Regulator Receiver Domain Protein; Two Component LuxR Family Transcriptional Regulator; Response Regulator Receiver Hybrid Histidine Kinase; Cache Sensor Hybrid Histidine Kinase; Chemotaxis Protein CheY; Periplasmic Sensor Hybrid Histidine Kinase; Response Regulator Receiver Sensor Hybrid Histidine Kinase; ATPase Histidine Kinase- DNA Gyrase B- And; Multi-Sensor Hybrid Multi-Kinase

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNNILVSNCPKNTHFIDDIRDLNVFKELTILMVDDDENMRFLIAEIFEIYGTKVMTATNPLEAFELIRKIKLDLLISDIN
MPERNGYWLIQQVRTLTDSKNREIPAIAFTGDAGLNIQKKAIAAGFQTCICKTSTIEQLVTEITKLLKPSWKLRREE

Sequences:

>Translated_157_residues
MNNILVSNCPKNTHFIDDIRDLNVFKELTILMVDDDENMRFLIAEIFEIYGTKVMTATNPLEAFELIRKIKLDLLISDIN
MPERNGYWLIQQVRTLTDSKNREIPAIAFTGDAGLNIQKKAIAAGFQTCICKTSTIEQLVTEITKLLKPSWKLRREE
>Mature_157_residues
MNNILVSNCPKNTHFIDDIRDLNVFKELTILMVDDDENMRFLIAEIFEIYGTKVMTATNPLEAFELIRKIKLDLLISDIN
MPERNGYWLIQQVRTLTDSKNREIPAIAFTGDAGLNIQKKAIAAGFQTCICKTSTIEQLVTEITKLLKPSWKLRREE

Specific function: Member Of The Two-Component Regulatory System rcsC/rcsB Involved In The Regulation Of The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. rcsC Probably Functions As A Membrane-Associated Protein Kinase That Phosphorylates rcsB In Response

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693157, Length=118, Percent_Identity=28.8135593220339, Blast_Score=64, Evalue=5e-12,
Organism=Escherichia coli, GI1788713, Length=121, Percent_Identity=29.7520661157025, Blast_Score=62, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.3.- [C]

Molecular weight: Translated: 18062; Mature: 18062

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNILVSNCPKNTHFIDDIRDLNVFKELTILMVDDDENMRFLIAEIFEIYGTKVMTATNP
CCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCEEEECCCH
LEAFELIRKIKLDLLISDINMPERNGYWLIQQVRTLTDSKNREIPAIAFTGDAGLNIQKK
HHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHH
AIAAGFQTCICKTSTIEQLVTEITKLLKPSWKLRREE
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNNILVSNCPKNTHFIDDIRDLNVFKELTILMVDDDENMRFLIAEIFEIYGTKVMTATNP
CCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHCCEEEECCCH
LEAFELIRKIKLDLLISDINMPERNGYWLIQQVRTLTDSKNREIPAIAFTGDAGLNIQKK
HHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHH
AIAAGFQTCICKTSTIEQLVTEITKLLKPSWKLRREE
HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Phosphotransferases with a nitrogenous group as acceptor [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA