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The map label for this gene is yfiY [H]

Identifier: 17232415

GI number: 17232415

Start: 5869288

End: 5870247

Strand: Reverse

Name: yfiY [H]

Synonym: all4923

Alternate gene names: 17232415

Gene position: 5870247-5869288 (Counterclockwise)

Preceding gene: 17232416

Following gene: 17232410

Centisome position: 91.53

GC content: 37.81

Gene sequence:

>960_bases
ATGCGTAATTCCAAATTTTTACTATTCCTGCTGACAATAGTTGTGGTTTTAGCGATCGCAGCTTGTAACCACAACATACC
CCAGTCAGCAAAAAGCCAAATAGCCACAAGAACCGTTAGCAATACTTTAGGTGAAGTGAAAGTTCCCCTAAAACCGCAGC
GAGTTGTTGTCTTAGAAGAAAATATAGTTCTCGATTCTGTACTGGCGTTGGGGATAAAGCCAGTTGGTGTGGCGTATTGT
CGGGAATGTGAGGAAAAATTTCGAGGTATACCCAGTGATTTACTTGCTGATGTTCCAGTGGTAGGAAACATTGGAACTCA
GCCTTCCCTAGAAAAAATTCTCAGTTTAAAACCAGATTTGATTTTGGGGTTAACTTGGCTCAAGAGTTCTTACAAACTGC
TTTCCAGCATCGCACCTACTGTACTAGTTGATTTTACTACTATGTACGATTTTAAAGAAAGACTACGATATGTAGCCCAG
GTGTTAGGAAAGAGCGATCGCGCCGAAGAACTCCTGACTCAGTATCAAAATCGCATTCAAAAACTACGACAGCAATTAGG
AAAACAATTAGAAACAAAAACAATATCTGTAATTTATCTTGCAGGTTCAGCAGATATTTTCTATAGCTACAGACCAGATT
TTATTACTTATGGGCAAATTCTGAGTGACGTTGGATTACAACTAATTCAGAAAAATCAAAAACAACTAGAGTTAACTTTA
AGTATTGAAGTTTTACCCAAATACGATGCAGATATTTTATTTATTATGACAGAACATTTGAGTCAAGATTTTAAATCTGC
AAATCCCGACTTTTTATCTTTCCTACAAAAGCCTATTTGGTCAAAACTGAAAGCTGTTCAGAATAAGCAAGTGTACAGGG
TAAATTGGACTGTCGGGGGGGCGATGGGAGCTAATAGAATAATTGATGACCTCTACAAATATCTGGTCAACACACCTTAA

Upstream 100 bases:

>100_bases
ACATCTTTGATACAGACTATTTCGTCTCTGTTACCAATAGAGATTTCGTGTTGCGAGGCGATCCATTCACCATCTCAGGT
ACAATTTCTTGGGATTTTTA

Downstream 100 bases:

>100_bases
ATTATCACCAAAGGGCGATCGCCTGGAAGATTCAGAGCATCATATTTCGAGTCAACCAGTGCGACGGCTACATCAATGTC
AATCACTAACTCATATCATT

Product: iron(III) dicitrate-binding periplasmic protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRNSKFLLFLLTIVVVLAIAACNHNIPQSAKSQIATRTVSNTLGEVKVPLKPQRVVVLEENIVLDSVLALGIKPVGVAYC
RECEEKFRGIPSDLLADVPVVGNIGTQPSLEKILSLKPDLILGLTWLKSSYKLLSSIAPTVLVDFTTMYDFKERLRYVAQ
VLGKSDRAEELLTQYQNRIQKLRQQLGKQLETKTISVIYLAGSADIFYSYRPDFITYGQILSDVGLQLIQKNQKQLELTL
SIEVLPKYDADILFIMTEHLSQDFKSANPDFLSFLQKPIWSKLKAVQNKQVYRVNWTVGGAMGANRIIDDLYKYLVNTP

Sequences:

>Translated_319_residues
MRNSKFLLFLLTIVVVLAIAACNHNIPQSAKSQIATRTVSNTLGEVKVPLKPQRVVVLEENIVLDSVLALGIKPVGVAYC
RECEEKFRGIPSDLLADVPVVGNIGTQPSLEKILSLKPDLILGLTWLKSSYKLLSSIAPTVLVDFTTMYDFKERLRYVAQ
VLGKSDRAEELLTQYQNRIQKLRQQLGKQLETKTISVIYLAGSADIFYSYRPDFITYGQILSDVGLQLIQKNQKQLELTL
SIEVLPKYDADILFIMTEHLSQDFKSANPDFLSFLQKPIWSKLKAVQNKQVYRVNWTVGGAMGANRIIDDLYKYLVNTP
>Mature_319_residues
MRNSKFLLFLLTIVVVLAIAACNHNIPQSAKSQIATRTVSNTLGEVKVPLKPQRVVVLEENIVLDSVLALGIKPVGVAYC
RECEEKFRGIPSDLLADVPVVGNIGTQPSLEKILSLKPDLILGLTWLKSSYKLLSSIAPTVLVDFTTMYDFKERLRYVAQ
VLGKSDRAEELLTQYQNRIQKLRQQLGKQLETKTISVIYLAGSADIFYSYRPDFITYGQILSDVGLQLIQKNQKQLELTL
SIEVLPKYDADILFIMTEHLSQDFKSANPDFLSFLQKPIWSKLKAVQNKQVYRVNWTVGGAMGANRIIDDLYKYLVNTP

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=292, Percent_Identity=25.6849315068493, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35940; Mature: 35940

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSKFLLFLLTIVVVLAIAACNHNIPQSAKSQIATRTVSNTLGEVKVPLKPQRVVVLEE
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEC
NIVLDSVLALGIKPVGVAYCRECEEKFRGIPSDLLADVPVVGNIGTQPSLEKILSLKPDL
CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCHH
ILGLTWLKSSYKLLSSIAPTVLVDFTTMYDFKERLRYVAQVLGKSDRAEELLTQYQNRIQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KLRQQLGKQLETKTISVIYLAGSADIFYSYRPDFITYGQILSDVGLQLIQKNQKQLELTL
HHHHHHHHHHHCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHEEEEE
SIEVLPKYDADILFIMTEHLSQDFKSANPDFLSFLQKPIWSKLKAVQNKQVYRVNWTVGG
EEEEECCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
AMGANRIIDDLYKYLVNTP
CCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNSKFLLFLLTIVVVLAIAACNHNIPQSAKSQIATRTVSNTLGEVKVPLKPQRVVVLEE
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCEEEEEEC
NIVLDSVLALGIKPVGVAYCRECEEKFRGIPSDLLADVPVVGNIGTQPSLEKILSLKPDL
CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCCHH
ILGLTWLKSSYKLLSSIAPTVLVDFTTMYDFKERLRYVAQVLGKSDRAEELLTQYQNRIQ
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KLRQQLGKQLETKTISVIYLAGSADIFYSYRPDFITYGQILSDVGLQLIQKNQKQLELTL
HHHHHHHHHHHCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHEEEEE
SIEVLPKYDADILFIMTEHLSQDFKSANPDFLSFLQKPIWSKLKAVQNKQVYRVNWTVGG
EEEEECCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC
AMGANRIIDDLYKYLVNTP
CCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]