| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17232396
Identifier: 17232396
GI number: 17232396
Start: 5848993
End: 5849697
Strand: Reverse
Name: 17232396
Synonym: all4904
Alternate gene names: NA
Gene position: 5849697-5848993 (Counterclockwise)
Preceding gene: 17232398
Following gene: 17232395
Centisome position: 91.21
GC content: 37.3
Gene sequence:
>705_bases ATGCCAACAATTCATTTGATAGATGGAGAAAAGGGAGGGGTGGGAAAGTCTTTAGTAGCTAGAACAATGATTCAGTATTG TCTGGATAATAATATGCCATTTGTACCTGTAGAAACCGATAGGTCAAATCCAGATGTAGCTGGAGTATACAAAAGTATAT GTCAGTATGCAGTATTTACAGAGGATGAAAGGCACGCAGATAAGGCGGATAAAATCTTTGAGATAGCAATGAATAAAACG GTGATTGCTAATCTTGCAGCACAATCTCATAGAGCAGTTAAGGGATGGATTGAGAAGAATCATTTAATTGAACTGGGAGA GTCTCAAGGGGTAGATTTTTGTAAGTGGTTTGTGTCAACAGGGGGGTATGACAGTCTCAATCTATTTAAGCAGTCTGTAA ATAGTTATGGTGGCAAAGTTCCTCATATATTAGTGAAAAATCTCGGCCTATGCGATGACTGGGAACACGTAAACTCAGAT GCAACAATCCAAGAGGTAGTAAAAAAATATAATGTTAAGGCTATAGATTTTCCCAAACTTGCGTATAAAGAAAGAAATAT AATAGACCAGCATAGATTAACGTTTGCAGATGCACGAGAGTATAAAGAATTTGGCATCATCAGCAAACAGAGAGTGGTAA ATTTTCTCAAGCTTGCCTATGCTTCTTTTGAAACCGTGGGTATTTGGTATGAAGAAGTTAAATGA
Upstream 100 bases:
>100_bases CTCAAGATGATATTTGCATTGTGCGGCAAATTTTTGGTCAACATTAACCCTGATAAAATCAGGAAATCAATACTAGGTTT AAAGATAAAGAGGTGCAACT
Downstream 100 bases:
>100_bases TGGAGCAACACAAGTAATCAATATCTGTTTCCCTTAAATCACGGCAATTCGTGAAATCCTCTCCACTCAGGGAGGATTTT TTTGTGCAGGGATTTTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MPTIHLIDGEKGGVGKSLVARTMIQYCLDNNMPFVPVETDRSNPDVAGVYKSICQYAVFTEDERHADKADKIFEIAMNKT VIANLAAQSHRAVKGWIEKNHLIELGESQGVDFCKWFVSTGGYDSLNLFKQSVNSYGGKVPHILVKNLGLCDDWEHVNSD ATIQEVVKKYNVKAIDFPKLAYKERNIIDQHRLTFADAREYKEFGIISKQRVVNFLKLAYASFETVGIWYEEVK
Sequences:
>Translated_234_residues MPTIHLIDGEKGGVGKSLVARTMIQYCLDNNMPFVPVETDRSNPDVAGVYKSICQYAVFTEDERHADKADKIFEIAMNKT VIANLAAQSHRAVKGWIEKNHLIELGESQGVDFCKWFVSTGGYDSLNLFKQSVNSYGGKVPHILVKNLGLCDDWEHVNSD ATIQEVVKKYNVKAIDFPKLAYKERNIIDQHRLTFADAREYKEFGIISKQRVVNFLKLAYASFETVGIWYEEVK >Mature_233_residues PTIHLIDGEKGGVGKSLVARTMIQYCLDNNMPFVPVETDRSNPDVAGVYKSICQYAVFTEDERHADKADKIFEIAMNKTV IANLAAQSHRAVKGWIEKNHLIELGESQGVDFCKWFVSTGGYDSLNLFKQSVNSYGGKVPHILVKNLGLCDDWEHVNSDA TIQEVVKKYNVKAIDFPKLAYKERNIIDQHRLTFADAREYKEFGIISKQRVVNFLKLAYASFETVGIWYEEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26557; Mature: 26425
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTIHLIDGEKGGVGKSLVARTMIQYCLDNNMPFVPVETDRSNPDVAGVYKSICQYAVFT CCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC EDERHADKADKIFEIAMNKTVIANLAAQSHRAVKGWIEKNHLIELGESQGVDFCKWFVST CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHC GGYDSLNLFKQSVNSYGGKVPHILVKNLGLCDDWEHVNSDATIQEVVKKYNVKAIDFPKL CCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHCCCEECCCHH AYKERNIIDQHRLTFADAREYKEFGIISKQRVVNFLKLAYASFETVGIWYEEVK HHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PTIHLIDGEKGGVGKSLVARTMIQYCLDNNMPFVPVETDRSNPDVAGVYKSICQYAVFT CEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCC EDERHADKADKIFEIAMNKTVIANLAAQSHRAVKGWIEKNHLIELGESQGVDFCKWFVST CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHC GGYDSLNLFKQSVNSYGGKVPHILVKNLGLCDDWEHVNSDATIQEVVKKYNVKAIDFPKL CCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHCCCEECCCHH AYKERNIIDQHRLTFADAREYKEFGIISKQRVVNFLKLAYASFETVGIWYEEVK HHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA