| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232361
Identifier: 17232361
GI number: 17232361
Start: 5799761
End: 5800339
Strand: Reverse
Name: 17232361
Synonym: all4869
Alternate gene names: NA
Gene position: 5800339-5799761 (Counterclockwise)
Preceding gene: 17232363
Following gene: 17232360
Centisome position: 90.44
GC content: 42.31
Gene sequence:
>579_bases ATGAACTTCGCGGAACCTGCTTCTGTAATTCGTTTGACTTCCCTCTCGGTGATAGCAGCCCTTGGTCTGCTTGCACCTGT GAATGCTCAAAACCCACAGCCTATTGACCCCAATAGTCCAAATAACCTGCGTCCTACAGCTCAAAATAACAGCGTGTTGA GCATCGAAGGTGGAGAACGTTTAATGAAAGAAGCAGAACAAGCGGTTGCTGCTCAAAACTATACCTTAGCTGCCAAAAAA CTCCAAGAAGCACGTCAGGTATATAATCAGTTATCGAATTTTTATCAAGATTTAAACTCTAGTTTTTCGGGAATTGACAA TAGAGTTTCTGATTCTCAACGTCAAAGAGCTTTATTAACAGCTCAAAAGCGAGATGAAGCAACCTATCAGTTAGCATTGG TACATCGCGCCCAAAACCAGGCAGAATTGGCCGTACCCTTATTGGTGCAAATTATTAGAAGTCAAAATCCAACGCGAGAT TTAGGGAAGAAAGCTTATCAGCAGTTGTTTGAGTTAGGTTTTGTTGATGCACCTTTTCCCCGACAAGGTGGTAATCCAGC ATCCTCATCACAGAAATAA
Upstream 100 bases:
>100_bases GTACTTAGCTTCGCTTTGTTAAAAACGCAAACAGAGTTAAGATACCCGAAGTTTCCCTATATTGATCTGTTTCTTAATAG TTGTTGCACAAATTGATCCC
Downstream 100 bases:
>100_bases ATAATTAAGTTCCTATTGTATTTCTATTGCTCCCCTCCTGCTTGTTGGCTGTGACAAAGTGCCAAAATGGTAGGATGGGA TTTTTTATATCTATTACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MNFAEPASVIRLTSLSVIAALGLLAPVNAQNPQPIDPNSPNNLRPTAQNNSVLSIEGGERLMKEAEQAVAAQNYTLAAKK LQEARQVYNQLSNFYQDLNSSFSGIDNRVSDSQRQRALLTAQKRDEATYQLALVHRAQNQAELAVPLLVQIIRSQNPTRD LGKKAYQQLFELGFVDAPFPRQGGNPASSSQK
Sequences:
>Translated_192_residues MNFAEPASVIRLTSLSVIAALGLLAPVNAQNPQPIDPNSPNNLRPTAQNNSVLSIEGGERLMKEAEQAVAAQNYTLAAKK LQEARQVYNQLSNFYQDLNSSFSGIDNRVSDSQRQRALLTAQKRDEATYQLALVHRAQNQAELAVPLLVQIIRSQNPTRD LGKKAYQQLFELGFVDAPFPRQGGNPASSSQK >Mature_192_residues MNFAEPASVIRLTSLSVIAALGLLAPVNAQNPQPIDPNSPNNLRPTAQNNSVLSIEGGERLMKEAEQAVAAQNYTLAAKK LQEARQVYNQLSNFYQDLNSSFSGIDNRVSDSQRQRALLTAQKRDEATYQLALVHRAQNQAELAVPLLVQIIRSQNPTRD LGKKAYQQLFELGFVDAPFPRQGGNPASSSQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21072; Mature: 21072
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFAEPASVIRLTSLSVIAALGLLAPVNAQNPQPIDPNSPNNLRPTAQNNSVLSIEGGER CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHH LMKEAEQAVAAQNYTLAAKKLQEARQVYNQLSNFYQDLNSSFSGIDNRVSDSQRQRALLT HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQKRDEATYQLALVHRAQNQAELAVPLLVQIIRSQNPTRDLGKKAYQQLFELGFVDAPFP HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC RQGGNPASSSQK CCCCCCCCCCCC >Mature Secondary Structure MNFAEPASVIRLTSLSVIAALGLLAPVNAQNPQPIDPNSPNNLRPTAQNNSVLSIEGGER CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHH LMKEAEQAVAAQNYTLAAKKLQEARQVYNQLSNFYQDLNSSFSGIDNRVSDSQRQRALLT HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQKRDEATYQLALVHRAQNQAELAVPLLVQIIRSQNPTRDLGKKAYQQLFELGFVDAPFP HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC RQGGNPASSSQK CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA