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The map label for this gene is 17232296

Identifier: 17232296

GI number: 17232296

Start: 5722249

End: 5722725

Strand: Reverse

Name: 17232296

Synonym: all4804

Alternate gene names: NA

Gene position: 5722725-5722249 (Counterclockwise)

Preceding gene: 17232297

Following gene: 17232294

Centisome position: 89.23

GC content: 38.99

Gene sequence:

>477_bases
ATGACATGGCGCGGGTCTACAACCATCAAAGATAGAATTTTTGCTTGTTTACCTTATCTGCTTCCTCTAATTGAAGTGTT
TGCCTTTGGTGAGTTTTTGTTGAGACAGTTTCCAGTTTTGCAACTACTGTTTCTGCCCCTCATTCCACTATTGAGAATTT
ATTACGGCGTTCGCTATGCTGGACTGATTATTTTCTTTGTTTTGTGGTTATTGGTAGTGAGGAATGAAAAAATTAATCAT
TTTATTCGTTTCAACACAATGCAAGCCATATTGTTAGACATCATTATATTTTTGTTTAGCATCCTCACAGATATAGTTGG
ATTGATTCCTACTGGGGGCTTTGCCATACAAACCCTATACACAACTATTTTCATCGGCATCATTGCTGCTGTGGTCTATT
CTGTGGCTAACTCTTTGTTGGGACGTTACGCAGAAATTCCCGCCATTTCTGATGCTGTTTATATGCAGGTGCGCTAG

Upstream 100 bases:

>100_bases
TGTTGCCCATATAGAATAATCATAATTGCTAGTAATGCTGAGTAACTGCGTTATCCTAAGCTCAAGTAGCTCATGAAATT
TAGCCACAGGAGAACGCACG

Downstream 100 bases:

>100_bases
GGCTAACGGGCTGCTACGGTGTTTTCTAGGCGACCAATGCCTTCAATTTCCACACGGATGCGATCGCCTTGTTGCAAAGC
TCCTACACCCTCTGGCGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTWRGSTTIKDRIFACLPYLLPLIEVFAFGEFLLRQFPVLQLLFLPLIPLLRIYYGVRYAGLIIFFVLWLLVVRNEKINH
FIRFNTMQAILLDIIIFLFSILTDIVGLIPTGGFAIQTLYTTIFIGIIAAVVYSVANSLLGRYAEIPAISDAVYMQVR

Sequences:

>Translated_158_residues
MTWRGSTTIKDRIFACLPYLLPLIEVFAFGEFLLRQFPVLQLLFLPLIPLLRIYYGVRYAGLIIFFVLWLLVVRNEKINH
FIRFNTMQAILLDIIIFLFSILTDIVGLIPTGGFAIQTLYTTIFIGIIAAVVYSVANSLLGRYAEIPAISDAVYMQVR
>Mature_157_residues
TWRGSTTIKDRIFACLPYLLPLIEVFAFGEFLLRQFPVLQLLFLPLIPLLRIYYGVRYAGLIIFFVLWLLVVRNEKINHF
IRFNTMQAILLDIIIFLFSILTDIVGLIPTGGFAIQTLYTTIFIGIIAAVVYSVANSLLGRYAEIPAISDAVYMQVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019109 [H]

Pfam domain/function: PF09685 Tic20 [H]

EC number: NA

Molecular weight: Translated: 18068; Mature: 17937

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWRGSTTIKDRIFACLPYLLPLIEVFAFGEFLLRQFPVLQLLFLPLIPLLRIYYGVRYA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIIFFVLWLLVVRNEKINHFIRFNTMQAILLDIIIFLFSILTDIVGLIPTGGFAIQTLY
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TTIFIGIIAAVVYSVANSLLGRYAEIPAISDAVYMQVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC
>Mature Secondary Structure 
TWRGSTTIKDRIFACLPYLLPLIEVFAFGEFLLRQFPVLQLLFLPLIPLLRIYYGVRYA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIIFFVLWLLVVRNEKINHFIRFNTMQAILLDIIIFLFSILTDIVGLIPTGGFAIQTLY
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TTIFIGIIAAVVYSVANSLLGRYAEIPAISDAVYMQVR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]