| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232293
Identifier: 17232293
GI number: 17232293
Start: 5720145
End: 5720705
Strand: Reverse
Name: 17232293
Synonym: all4801
Alternate gene names: NA
Gene position: 5720705-5720145 (Counterclockwise)
Preceding gene: 17232294
Following gene: 17232291
Centisome position: 89.19
GC content: 44.21
Gene sequence:
>561_bases GTGATCCAAACTGACACACCCAACATCCAATCTCTATCGACAGAAGTATCGCAGCTGCGTCAAGAACTACAGCTTCGAGA TCAACTAGTACAACAGCTATCTCAAGAACTATTTAGGCTAGTCAAGGGCAATACTAATTTTATGCCCCAACGCTTGGAGT CTGAGTATGATTTAAGCCAGTTACAAGCATTGCGAGAGCAATTACAAGCTGTTGAACAACAAGTAACATTTTATCAAGAG CAAATCACATCTCGTGACACTGAAATTTACCAACTGCGTCAGTCTGTACAAGAACTTACAGACCGTAGTCGGATGTTGGA GCAAGTAGTGCAGGAACTACCCCAAATTTACCGTCGTAAGTTTGAAGAACGTATGGCTCCCGTTAGAGAAAAAGTCGCCG TTCTACAACGAGAAAACCGTCAGTTGCAAGCAGAACTCCAAAGTGTGAGTTATCGTCTAGCACTCAAAACCCGTACCTCT AGCCACAGTGGTATTGATTTGCCTAACTTCCCCCGTCCAACATCGGGACAAGCTAATATTCCTAGCGTGCATAACGCGTG A
Upstream 100 bases:
>100_bases ATTTAGTTGGGAATGCTAGATTAACAAGTACTTGCCAAAAGCAGTACTATTGCAGTTAGACATAAGGTTCGACATTCGTC AATGGGAACTGTAAGCCACC
Downstream 100 bases:
>100_bases TTTTGTAGTAACTTAAAGTATCTCAATACTAAAGAATAGATTCCACCCCTCTATCTTTTCCTTTATATTTGTCATTAAAA GTCTATTAAGTAGACTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MIQTDTPNIQSLSTEVSQLRQELQLRDQLVQQLSQELFRLVKGNTNFMPQRLESEYDLSQLQALREQLQAVEQQVTFYQE QITSRDTEIYQLRQSVQELTDRSRMLEQVVQELPQIYRRKFEERMAPVREKVAVLQRENRQLQAELQSVSYRLALKTRTS SHSGIDLPNFPRPTSGQANIPSVHNA
Sequences:
>Translated_186_residues MIQTDTPNIQSLSTEVSQLRQELQLRDQLVQQLSQELFRLVKGNTNFMPQRLESEYDLSQLQALREQLQAVEQQVTFYQE QITSRDTEIYQLRQSVQELTDRSRMLEQVVQELPQIYRRKFEERMAPVREKVAVLQRENRQLQAELQSVSYRLALKTRTS SHSGIDLPNFPRPTSGQANIPSVHNA >Mature_186_residues MIQTDTPNIQSLSTEVSQLRQELQLRDQLVQQLSQELFRLVKGNTNFMPQRLESEYDLSQLQALREQLQAVEQQVTFYQE QITSRDTEIYQLRQSVQELTDRSRMLEQVVQELPQIYRRKFEERMAPVREKVAVLQRENRQLQAELQSVSYRLALKTRTS SHSGIDLPNFPRPTSGQANIPSVHNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21799; Mature: 21799
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTDTPNIQSLSTEVSQLRQELQLRDQLVQQLSQELFRLVKGNTNFMPQRLESEYDLSQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHH LQALREQLQAVEQQVTFYQEQITSRDTEIYQLRQSVQELTDRSRMLEQVVQELPQIYRRK HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEERMAPVREKVAVLQRENRQLQAELQSVSYRLALKTRTSSHSGIDLPNFPRPTSGQANI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PSVHNA CCCCCC >Mature Secondary Structure MIQTDTPNIQSLSTEVSQLRQELQLRDQLVQQLSQELFRLVKGNTNFMPQRLESEYDLSQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHH LQALREQLQAVEQQVTFYQEQITSRDTEIYQLRQSVQELTDRSRMLEQVVQELPQIYRRK HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEERMAPVREKVAVLQRENRQLQAELQSVSYRLALKTRTSSHSGIDLPNFPRPTSGQANI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PSVHNA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA