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The map label for this gene is tsf [H]

Identifier: 17232283

GI number: 17232283

Start: 5708440

End: 5709381

Strand: Reverse

Name: tsf [H]

Synonym: all4791

Alternate gene names: 17232283

Gene position: 5709381-5708440 (Counterclockwise)

Preceding gene: 17232284

Following gene: 17232282

Centisome position: 89.02

GC content: 43.84

Gene sequence:

>942_bases
ATGGCGGAAATATCTGCAAAACTCGTCCAAGAGCTACGCCAAAAGACTGGTGCTGGCATGATGGACTGCAAAAAAGCGCT
GAAAGAAACTGAAGGCGATGTCGAACAAGCCATAGATTGGCTACGGAAAAAAGGTATCGCTTCTGCGGGTAAAAAAAGCG
ATCGCATTGCGGCAGAAGGTCTAGTGGACACCTACATTCAACCCGGTGGTAAAGTAGGTGTACTGATAGAAGTTAACTGC
CAAACAGATTTCGTCGCCCGTAACGATGCTTTTAAAACTCTAGTTAAAAACTTAGCTCAACAAGCAGCAACAGCCGATAG
TGTTGAGTCTTTGCTAGCTCAACCCTACATTGAAGATGCTAACCTCACTGTAGATGAAGCCATCAAGCAAACTATTGCTA
ACTTGGGTGAGAATATCCAGGTACGGCGCTTTATCAATTTTGCACTCACAGATAAGACAGGCGTTGTAGACAGCTACATT
CACACCGGCGGTCGAGTTGGTGTGTTAGTTGAACTAAACTCTCAATCAGAAGCTGGTGCTGCTAACGAAGAAGTGCAGAA
TTTAGCAAGAAACGCAGCTATGCAGGTTGCAGCTTGTCCCAATGTTGAGTATGTCAGCGTAGACCAAATCCCTGCTGAAG
TTGTTCAGAGAGAAAAAGACGTTGAATCTGGTAAAGAAGACATAGCAAATAAACCAGAGAACATTAGAGAAAAAATTGTT
CAAGGACGAATTGAAAAACGCCTAAAAGAACTAACTCTAGTGGATCAGCCTTACATTCGCGATCAGAGTATTTCTGTAGA
AGACTTGGTGAAACAAGTTAAGGCTAAAGCGGGTGAAGAAGTTGAAGTCAGCCGTTTTGTACGCTACATACTGGGTGAAG
GCATCGAAAAGCAAGAAAGCAACTTTGCTGAAGAAGTCGCCGCCCAAATGGGTGTGAAGTAA

Upstream 100 bases:

>100_bases
ACTGTTGTTTAAGTACTTTCACTTGGCACACAGCACTCTTAACTCAGCACTGTTTCAGTGAGCGATTACAACTCAAGGTC
AAGTTAGGAATTGAGGCAAC

Downstream 100 bases:

>100_bases
TTAATTAGTCATTAGTCACGAGTCATTAGTCATTATTTATGAGTTTTTTGACTGTGGACTGCGGACTATTGACTCTTATG
CAGCAGGTCAAGCAGATAGC

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MAEISAKLVQELRQKTGAGMMDCKKALKETEGDVEQAIDWLRKKGIASAGKKSDRIAAEGLVDTYIQPGGKVGVLIEVNC
QTDFVARNDAFKTLVKNLAQQAATADSVESLLAQPYIEDANLTVDEAIKQTIANLGENIQVRRFINFALTDKTGVVDSYI
HTGGRVGVLVELNSQSEAGAANEEVQNLARNAAMQVAACPNVEYVSVDQIPAEVVQREKDVESGKEDIANKPENIREKIV
QGRIEKRLKELTLVDQPYIRDQSISVEDLVKQVKAKAGEEVEVSRFVRYILGEGIEKQESNFAEEVAAQMGVK

Sequences:

>Translated_313_residues
MAEISAKLVQELRQKTGAGMMDCKKALKETEGDVEQAIDWLRKKGIASAGKKSDRIAAEGLVDTYIQPGGKVGVLIEVNC
QTDFVARNDAFKTLVKNLAQQAATADSVESLLAQPYIEDANLTVDEAIKQTIANLGENIQVRRFINFALTDKTGVVDSYI
HTGGRVGVLVELNSQSEAGAANEEVQNLARNAAMQVAACPNVEYVSVDQIPAEVVQREKDVESGKEDIANKPENIREKIV
QGRIEKRLKELTLVDQPYIRDQSISVEDLVKQVKAKAGEEVEVSRFVRYILGEGIEKQESNFAEEVAAQMGVK
>Mature_312_residues
AEISAKLVQELRQKTGAGMMDCKKALKETEGDVEQAIDWLRKKGIASAGKKSDRIAAEGLVDTYIQPGGKVGVLIEVNCQ
TDFVARNDAFKTLVKNLAQQAATADSVESLLAQPYIEDANLTVDEAIKQTIANLGENIQVRRFINFALTDKTGVVDSYIH
TGGRVGVLVELNSQSEAGAANEEVQNLARNAAMQVAACPNVEYVSVDQIPAEVVQREKDVESGKEDIANKPENIREKIVQ
GRIEKRLKELTLVDQPYIRDQSISVEDLVKQVKAKAGEEVEVSRFVRYILGEGIEKQESNFAEEVAAQMGVK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=317, Percent_Identity=26.1829652996845, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI291084500, Length=134, Percent_Identity=38.0597014925373, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI291084498, Length=115, Percent_Identity=40.8695652173913, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI291084502, Length=115, Percent_Identity=40.8695652173913, Blast_Score=78, Evalue=9e-15,
Organism=Escherichia coli, GI1786366, Length=313, Percent_Identity=42.4920127795527, Blast_Score=197, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17561440, Length=315, Percent_Identity=27.6190476190476, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI19921466, Length=166, Percent_Identity=35.5421686746988, Blast_Score=84, Evalue=2e-16,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 34275; Mature: 34144

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEISAKLVQELRQKTGAGMMDCKKALKETEGDVEQAIDWLRKKGIASAGKKSDRIAAEG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCHHHHHH
LVDTYIQPGGKVGVLIEVNCQTDFVARNDAFKTLVKNLAQQAATADSVESLLAQPYIEDA
HHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NLTVDEAIKQTIANLGENIQVRRFINFALTDKTGVVDSYIHTGGRVGVLVELNSQSEAGA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCCCCCC
ANEEVQNLARNAAMQVAACPNVEYVSVDQIPAEVVQREKDVESGKEDIANKPENIREKIV
CHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QGRIEKRLKELTLVDQPYIRDQSISVEDLVKQVKAKAGEEVEVSRFVRYILGEGIEKQES
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHH
NFAEEVAAQMGVK
HHHHHHHHHHCCC
>Mature Secondary Structure 
AEISAKLVQELRQKTGAGMMDCKKALKETEGDVEQAIDWLRKKGIASAGKKSDRIAAEG
CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHCCCCCCHHHHHH
LVDTYIQPGGKVGVLIEVNCQTDFVARNDAFKTLVKNLAQQAATADSVESLLAQPYIEDA
HHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NLTVDEAIKQTIANLGENIQVRRFINFALTDKTGVVDSYIHTGGRVGVLVELNSQSEAGA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEEECCCCCCCC
ANEEVQNLARNAAMQVAACPNVEYVSVDQIPAEVVQREKDVESGKEDIANKPENIREKIV
CHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
QGRIEKRLKELTLVDQPYIRDQSISVEDLVKQVKAKAGEEVEVSRFVRYILGEGIEKQES
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHH
NFAEEVAAQMGVK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA