| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is recG [H]
Identifier: 17232281
GI number: 17232281
Start: 5704840
End: 5707308
Strand: Reverse
Name: recG [H]
Synonym: all4789
Alternate gene names: 17232281
Gene position: 5707308-5704840 (Counterclockwise)
Preceding gene: 17232282
Following gene: 17232274
Centisome position: 88.99
GC content: 44.63
Gene sequence:
>2469_bases ATGAGCAATGACCAACCAGATTGGATAAGATTGCATAAAGCCTTAGCGGTGGAAGCAGAACACGGCTTTACAGACTTGCT AGGTAAGCAATACCGCTTTAGTGAATTTCTCAGCTTGACTTTTGGGAAATTCCCGACGGTCTTACCTGCTATTGAACGTC GTCGTTGGCAGGAATTGGCAGAGAAGTTTGCTAACTATCCTCATTTGGTACAGAAAGAAAGACAACATCTCATAGCGGAA ACTCGTAGGTATCTTTACCAACTGCAAAAAGAGCAAGAAGAACCTAAAGAGGCGCAAGCAACCAGTTATAAATCAAAACT TCCTAATGCGACCCCAGTTGTAGCGGAGGTAAGTCGGAGGTTAGCACCGAAAATTGACCAGAAACTCAGTGATTTACCAG AAATAGGTATTCGCAAAGCCGATAAATTAGCGGCTTTACGTTTGTATACAGTGCGCGACTTGCTTTTTTACTATCCCCGT GACCATATAGACTATGCGCGTCAGGTAAATATCCGCGAGTTGGAAGCGGGTGAGACGGTGACCATAGTAGCCACAGTCAA AAAGTGTAATTGTTTTACTAGCCCCAAGAATCAAAAATTATCGATTTTAGAGTTAATACTTAAAGATAATACAGGTCAAA TTAAAATCAGTCGTTTCTCGGCGGGGGCGCGGTTTACCAGTCGCGCTTGGCAGGAAAGTTTAAAACGCCGTTATCCTGTG GGTAGTGTGTTGGCGGCTTGTGGGTTAGTTAAAGGGACTAAATACGGCTTGACGCTCGATAACCCCGAATTGGAAGTTTT AGCGAACCCTGGAGACACTATTGAGTCTTTGACAATGGGGCGGGTAGTGCCGATTTACAGCCTCACCGAGGGAGTAATGG CTAGTATGGTCAGACAGGCGGTACTTGCGGCCTTACCTGCGGCGGTGCATTTAAAAGACCCATTACCTAAAGGTTTGCGG GAAAAATATGGTTTGATGGAATTGAAGGATGCGATCGCTAACATCCATTTTCCTGATGAAAGTGCTACCTTGCAAGTTGC CCGTCGTCGCCTCGTTTTCGATGAATTTTTCTACCTGCAACTCGGTTTATTGCAACGTCAGCAGCAAGCGAAAGCGATTC AAACTAGTGCAATTCTGGCTCCCAAAGGTAAGTTAATCGAAAATTTCTACGAAATACTACCATTTCAACTCACAGGCGCA CAACAGCGAGTCCTGAACGACATCCTCAACGACTTACAAAAATCCGCACCGATGAATCGTTTAGTACAGGGTGATGTGGG TTCAGGTAAAACTGTAGTGGCGGTGGTAGCAATTTTAGCTGCCATTCAATCTGGCTACCAAGCCGCGTTAATGGCTCCTA CAGAAGTATTAGCAGAGCAACATTACCGTAAGTTAGTTAGCTGGTTTAACCTGCTGCATTTGCCAGTGGAATTACTTACA GGCTCTACCAAAACTGTCAAAAGAAGACAGATACATTCCCAATTAGAAACAGGTGAATTACCCTTATTGGTGGGAACTCA CGCTTTGATTCAAGACCCGGTAAATTTCCAGCGATTGGGTTTAGTTGTCATTGATGAACAGCATCGCTTTGGGGTCAAAC AAAGGGCGCTGTTGCAGCAAAAAGGCGAACAACCCCATGTATTAACTATGACGGCTACACCCATTCCTCGGACACTGGCA TTAACTATACACGGGGATATGAACGTCAGTCAAATTGATGAGTTACCACCAGGACGGCAAAAGATTCAGACCACAATGTT AAGTGGTCAGCAACGTCCCCAAGCTTACGACCTCATCCGCCGAGAAATTGCCCAAGGTAGGCAAACTTATGTAGTCTTGC CATTGGTAGAAGAATCAGAGAAACTAGATTTGCGATCAGCAGTAGAAGAACACCAAAAGTTACAAGAGAGCGTTTTTCCA GATTTTCAAGTCGGTTTGCTACACGGTCGCATGAGTTCGGCGGAAAAGGACGAAGCTATTACCAAATTCCGCGACAATGA AACGCAGATTCTTGTATCTACAACCGTTGTTGAAGTTGGTGTGGATGTACCCAATGCAACAGTCATGCTCATAGAAAATG CTGAAAGATTCGGCTTGTCACAACTACATCAATTGCGCGGGCGTGTGGGTCGAGGTGCAGCCCAGTCTTACTGTTTATTA ATGAGTAGTTCTAGAAGCCCTGACGCTCAACAACGTCTGAAAGTATTAGAACAGTCTCAAGACGGCTTTTTCATCTCCGA AATGGATATGCGTTTTCGTGGGCCGGGTGAAGTGTTAGGAACAAGGCAATCTGGTGTGCCTGATTTTACCTTAGCTAGTT TAGTAGAAGATGAAGAAGTTTTATTATTAGCCAGACAAGCCGCCGAGAAAGTAATAGAAATAGATGCCAGTTTAGAGCGT TGGGCTTTGATGAAAGCAGAGTTGAAATATCGCTATGAACGCTTGATGGGTGGGGCAATTTTAACTTGA
Upstream 100 bases:
>100_bases TATGAGGATTAGTTAGTTGTCAGTTGTTATTAGCATTGGTCATAATACTGACTCTGATTGTATTGATTTTGAATTTTGAA TTCCCCTTAGGGGTTGACTA
Downstream 100 bases:
>100_bases TAAACTCAGCCCTCACAATAGTAATTGATCCTTACCAATTACCAATAACCAACCCCCACAGATATTATCTATAGGACTTA CGCAAACACGTTATCTGTTG
Product: ATP-dependent DNA helicase RecG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 822; Mature: 821
Protein sequence:
>822_residues MSNDQPDWIRLHKALAVEAEHGFTDLLGKQYRFSEFLSLTFGKFPTVLPAIERRRWQELAEKFANYPHLVQKERQHLIAE TRRYLYQLQKEQEEPKEAQATSYKSKLPNATPVVAEVSRRLAPKIDQKLSDLPEIGIRKADKLAALRLYTVRDLLFYYPR DHIDYARQVNIRELEAGETVTIVATVKKCNCFTSPKNQKLSILELILKDNTGQIKISRFSAGARFTSRAWQESLKRRYPV GSVLAACGLVKGTKYGLTLDNPELEVLANPGDTIESLTMGRVVPIYSLTEGVMASMVRQAVLAALPAAVHLKDPLPKGLR EKYGLMELKDAIANIHFPDESATLQVARRRLVFDEFFYLQLGLLQRQQQAKAIQTSAILAPKGKLIENFYEILPFQLTGA QQRVLNDILNDLQKSAPMNRLVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNLLHLPVELLT GSTKTVKRRQIHSQLETGELPLLVGTHALIQDPVNFQRLGLVVIDEQHRFGVKQRALLQQKGEQPHVLTMTATPIPRTLA LTIHGDMNVSQIDELPPGRQKIQTTMLSGQQRPQAYDLIRREIAQGRQTYVVLPLVEESEKLDLRSAVEEHQKLQESVFP DFQVGLLHGRMSSAEKDEAITKFRDNETQILVSTTVVEVGVDVPNATVMLIENAERFGLSQLHQLRGRVGRGAAQSYCLL MSSSRSPDAQQRLKVLEQSQDGFFISEMDMRFRGPGEVLGTRQSGVPDFTLASLVEDEEVLLLARQAAEKVIEIDASLER WALMKAELKYRYERLMGGAILT
Sequences:
>Translated_822_residues MSNDQPDWIRLHKALAVEAEHGFTDLLGKQYRFSEFLSLTFGKFPTVLPAIERRRWQELAEKFANYPHLVQKERQHLIAE TRRYLYQLQKEQEEPKEAQATSYKSKLPNATPVVAEVSRRLAPKIDQKLSDLPEIGIRKADKLAALRLYTVRDLLFYYPR DHIDYARQVNIRELEAGETVTIVATVKKCNCFTSPKNQKLSILELILKDNTGQIKISRFSAGARFTSRAWQESLKRRYPV GSVLAACGLVKGTKYGLTLDNPELEVLANPGDTIESLTMGRVVPIYSLTEGVMASMVRQAVLAALPAAVHLKDPLPKGLR EKYGLMELKDAIANIHFPDESATLQVARRRLVFDEFFYLQLGLLQRQQQAKAIQTSAILAPKGKLIENFYEILPFQLTGA QQRVLNDILNDLQKSAPMNRLVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNLLHLPVELLT GSTKTVKRRQIHSQLETGELPLLVGTHALIQDPVNFQRLGLVVIDEQHRFGVKQRALLQQKGEQPHVLTMTATPIPRTLA LTIHGDMNVSQIDELPPGRQKIQTTMLSGQQRPQAYDLIRREIAQGRQTYVVLPLVEESEKLDLRSAVEEHQKLQESVFP DFQVGLLHGRMSSAEKDEAITKFRDNETQILVSTTVVEVGVDVPNATVMLIENAERFGLSQLHQLRGRVGRGAAQSYCLL MSSSRSPDAQQRLKVLEQSQDGFFISEMDMRFRGPGEVLGTRQSGVPDFTLASLVEDEEVLLLARQAAEKVIEIDASLER WALMKAELKYRYERLMGGAILT >Mature_821_residues SNDQPDWIRLHKALAVEAEHGFTDLLGKQYRFSEFLSLTFGKFPTVLPAIERRRWQELAEKFANYPHLVQKERQHLIAET RRYLYQLQKEQEEPKEAQATSYKSKLPNATPVVAEVSRRLAPKIDQKLSDLPEIGIRKADKLAALRLYTVRDLLFYYPRD HIDYARQVNIRELEAGETVTIVATVKKCNCFTSPKNQKLSILELILKDNTGQIKISRFSAGARFTSRAWQESLKRRYPVG SVLAACGLVKGTKYGLTLDNPELEVLANPGDTIESLTMGRVVPIYSLTEGVMASMVRQAVLAALPAAVHLKDPLPKGLRE KYGLMELKDAIANIHFPDESATLQVARRRLVFDEFFYLQLGLLQRQQQAKAIQTSAILAPKGKLIENFYEILPFQLTGAQ QRVLNDILNDLQKSAPMNRLVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNLLHLPVELLTG STKTVKRRQIHSQLETGELPLLVGTHALIQDPVNFQRLGLVVIDEQHRFGVKQRALLQQKGEQPHVLTMTATPIPRTLAL TIHGDMNVSQIDELPPGRQKIQTTMLSGQQRPQAYDLIRREIAQGRQTYVVLPLVEESEKLDLRSAVEEHQKLQESVFPD FQVGLLHGRMSSAEKDEAITKFRDNETQILVSTTVVEVGVDVPNATVMLIENAERFGLSQLHQLRGRVGRGAAQSYCLLM SSSRSPDAQQRLKVLEQSQDGFFISEMDMRFRGPGEVLGTRQSGVPDFTLASLVEDEEVLLLARQAAEKVIEIDASLERW ALMKAELKYRYERLMGGAILT
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG1200
COG function: function code LK; RecG-like helicase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI2367254, Length=698, Percent_Identity=40.974212034384, Blast_Score=435, Evalue=1e-123, Organism=Escherichia coli, GI1787357, Length=383, Percent_Identity=36.0313315926893, Blast_Score=248, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR004609 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 92498; Mature: 92367
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDQPDWIRLHKALAVEAEHGFTDLLGKQYRFSEFLSLTFGKFPTVLPAIERRRWQELA CCCCCCHHHHHHHHHHEECCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EKFANYPHLVQKERQHLIAETRRYLYQLQKEQEEPKEAQATSYKSKLPNATPVVAEVSRR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH LAPKIDQKLSDLPEIGIRKADKLAALRLYTVRDLLFYYPRDHIDYARQVNIRELEAGETV HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCEE TIVATVKKCNCFTSPKNQKLSILELILKDNTGQIKISRFSAGARFTSRAWQESLKRRYPV EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCH GSVLAACGLVKGTKYGLTLDNPELEVLANPGDTIESLTMGRVVPIYSLTEGVMASMVRQA HHHHHHHHHHCCCCCCEEECCCCEEEEECCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHH VLAALPAAVHLKDPLPKGLREKYGLMELKDAIANIHFPDESATLQVARRRLVFDEFFYLQ HHHHCCHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LGLLQRQQQAKAIQTSAILAPKGKLIENFYEILPFQLTGAQQRVLNDILNDLQKSAPMNR HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHH LVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNLLHLPVELLT HHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSTKTVKRRQIHSQLETGELPLLVGTHALIQDPVNFQRLGLVVIDEQHRFGVKQRALLQQ CCHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCHHHEEEEEEECHHHCCHHHHHHHHH KGEQPHVLTMTATPIPRTLALTIHGDMNVSQIDELPPGRQKIQTTMLSGQQRPQAYDLIR CCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHH REIAQGRQTYVVLPLVEESEKLDLRSAVEEHQKLQESVFPDFQVGLLHGRMSSAEKDEAI HHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHH TKFRDNETQILVSTTVVEVGVDVPNATVMLIENAERFGLSQLHQLRGRVGRGAAQSYCLL HHHCCCCCEEEEEEEEEEECCCCCCCEEEEEECCHHCCHHHHHHHHHHHCCCHHHHEEEE MSSSRSPDAQQRLKVLEQSQDGFFISEMDMRFRGPGEVLGTRQSGVPDFTLASLVEDEEV EECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCCCCCCHHHHHHHCCHHH LLLARQAAEKVIEIDASLERWALMKAELKYRYERLMGGAILT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SNDQPDWIRLHKALAVEAEHGFTDLLGKQYRFSEFLSLTFGKFPTVLPAIERRRWQELA CCCCCHHHHHHHHHHEECCCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH EKFANYPHLVQKERQHLIAETRRYLYQLQKEQEEPKEAQATSYKSKLPNATPVVAEVSRR HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHH LAPKIDQKLSDLPEIGIRKADKLAALRLYTVRDLLFYYPRDHIDYARQVNIRELEAGETV HHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECCCCEE TIVATVKKCNCFTSPKNQKLSILELILKDNTGQIKISRFSAGARFTSRAWQESLKRRYPV EEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCH GSVLAACGLVKGTKYGLTLDNPELEVLANPGDTIESLTMGRVVPIYSLTEGVMASMVRQA HHHHHHHHHHCCCCCCEEECCCCEEEEECCCCHHHHHHCCCEEHHHHHHHHHHHHHHHHH VLAALPAAVHLKDPLPKGLREKYGLMELKDAIANIHFPDESATLQVARRRLVFDEFFYLQ HHHHCCHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LGLLQRQQQAKAIQTSAILAPKGKLIENFYEILPFQLTGAQQRVLNDILNDLQKSAPMNR HHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHH LVQGDVGSGKTVVAVVAILAAIQSGYQAALMAPTEVLAEQHYRKLVSWFNLLHLPVELLT HHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSTKTVKRRQIHSQLETGELPLLVGTHALIQDPVNFQRLGLVVIDEQHRFGVKQRALLQQ CCHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCHHHEEEEEEECHHHCCHHHHHHHHH KGEQPHVLTMTATPIPRTLALTIHGDMNVSQIDELPPGRQKIQTTMLSGQQRPQAYDLIR CCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHH REIAQGRQTYVVLPLVEESEKLDLRSAVEEHQKLQESVFPDFQVGLLHGRMSSAEKDEAI HHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHH TKFRDNETQILVSTTVVEVGVDVPNATVMLIENAERFGLSQLHQLRGRVGRGAAQSYCLL HHHCCCCCEEEEEEEEEEECCCCCCCEEEEEECCHHCCHHHHHHHHHHHCCCHHHHEEEE MSSSRSPDAQQRLKVLEQSQDGFFISEMDMRFRGPGEVLGTRQSGVPDFTLASLVEDEEV EECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCCCCCCHHHHHHHCCHHH LLLARQAAEKVIEIDASLERWALMKAELKYRYERLMGGAILT HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]