| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232252
Identifier: 17232252
GI number: 17232252
Start: 5672993
End: 5673955
Strand: Reverse
Name: 17232252
Synonym: all4760
Alternate gene names: NA
Gene position: 5673955-5672993 (Counterclockwise)
Preceding gene: 17232253
Following gene: 17232251
Centisome position: 88.47
GC content: 39.25
Gene sequence:
>963_bases ATGAATTTAGCGACTGCAACTACCCCCAAAACATTTAGTCTTTTAAGTATTGGTCAACGAGGAGTTGGCAAAACAGTTTT CCTCGCCGGCAGCTATACAGAATTAAGTCCTGATAGTCAAACGAATACTCCTCAGAAGTTGTGGTTTGATTGTCAAGATA CGGAAGTGCAAGCAAACCTGGAAAATATTAAAAATCACGTTGCTCGTACCAATCTCTACCCACCTCCCACAATTAAGATT ACTAATTTTAACTTTAGTTTGAAGCGTCAAATTCGCTCAAGTGTGGAAACAGTGTGCAACTTTCGTTGGTGGGATATTCC TGGTGAGTCCTGTAATATTCATAATCCTGACTTTCAGGAAATGATCCTCACTTCTAGTGGTTGCTGTGTATTCATTAATG CCAATGCTCTGATTAATGATCAAAATTACCCGCACTTACTAGAGGATATTTACAACCAAGTAGCAGCGATCGCCTCTGTA GTTTACAAGTATAATATTAAGTATGCGTTCGCCTTGATTTTGACTAAGTGCGATCTGCTCGAACTCAATCCATCAACCCT GCTACAAATTGATCAGCACCTGCAACCACTAATTACCTATCTTGATTCCCTGAAAGCTACCTATCAAAAATTTTATTCTG CTATTCCTATTGTTTCTCTAGATGGTGTTTCCAGTCTCAAAGCTAAAGGCGCAGCTAGTCCCTTACTGTGGTTGTTATCA AATCTCAACGATGTGGAAATTTATCCACCACAAGAAGATTTGACAGATGAACCGAGCCAGCAGTCATTTATTGCATGGAT ACCACGACCAAAAAGCTCCAAGGAAGTTTTACTTGTATCTTTGGTAAGTGCTATTTTACTAGGGGCGATCGCATCACTTT TCCTATCCTTCAAATCATTAACATCTATTCCCCAACAAGCACCAACCATAGAACAACCATCAAACCCAATTAAACAATAT TAA
Upstream 100 bases:
>100_bases TGCCTATTTCTAGGATGTCATTTCTGGGAATGTTGCAAATTATCTAGAATTTCCATAGCACAACAAAATATTGAATAATT ATTACAGTGATGGTGATGAT
Downstream 100 bases:
>100_bases TTTGATAAAATTTCCCAGTTTCCAAATTTAATAAAAGATCAGATTCTCTTTCCCCTGCCCTCGTAGTATGACCCCTTTAC ATTTAGGTCAACTTGTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MNLATATTPKTFSLLSIGQRGVGKTVFLAGSYTELSPDSQTNTPQKLWFDCQDTEVQANLENIKNHVARTNLYPPPTIKI TNFNFSLKRQIRSSVETVCNFRWWDIPGESCNIHNPDFQEMILTSSGCCVFINANALINDQNYPHLLEDIYNQVAAIASV VYKYNIKYAFALILTKCDLLELNPSTLLQIDQHLQPLITYLDSLKATYQKFYSAIPIVSLDGVSSLKAKGAASPLLWLLS NLNDVEIYPPQEDLTDEPSQQSFIAWIPRPKSSKEVLLVSLVSAILLGAIASLFLSFKSLTSIPQQAPTIEQPSNPIKQY
Sequences:
>Translated_320_residues MNLATATTPKTFSLLSIGQRGVGKTVFLAGSYTELSPDSQTNTPQKLWFDCQDTEVQANLENIKNHVARTNLYPPPTIKI TNFNFSLKRQIRSSVETVCNFRWWDIPGESCNIHNPDFQEMILTSSGCCVFINANALINDQNYPHLLEDIYNQVAAIASV VYKYNIKYAFALILTKCDLLELNPSTLLQIDQHLQPLITYLDSLKATYQKFYSAIPIVSLDGVSSLKAKGAASPLLWLLS NLNDVEIYPPQEDLTDEPSQQSFIAWIPRPKSSKEVLLVSLVSAILLGAIASLFLSFKSLTSIPQQAPTIEQPSNPIKQY >Mature_320_residues MNLATATTPKTFSLLSIGQRGVGKTVFLAGSYTELSPDSQTNTPQKLWFDCQDTEVQANLENIKNHVARTNLYPPPTIKI TNFNFSLKRQIRSSVETVCNFRWWDIPGESCNIHNPDFQEMILTSSGCCVFINANALINDQNYPHLLEDIYNQVAAIASV VYKYNIKYAFALILTKCDLLELNPSTLLQIDQHLQPLITYLDSLKATYQKFYSAIPIVSLDGVSSLKAKGAASPLLWLLS NLNDVEIYPPQEDLTDEPSQQSFIAWIPRPKSSKEVLLVSLVSAILLGAIASLFLSFKSLTSIPQQAPTIEQPSNPIKQY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35706; Mature: 35706
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLATATTPKTFSLLSIGQRGVGKTVFLAGSYTELSPDSQTNTPQKLWFDCQDTEVQANL CCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHEEECCCCCHHHHHH ENIKNHVARTNLYPPPTIKITNFNFSLKRQIRSSVETVCNFRWWDIPGESCNIHNPDFQE HHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHH MILTSSGCCVFINANALINDQNYPHLLEDIYNQVAAIASVVYKYNIKYAFALILTKCDLL HHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE ELNPSTLLQIDQHLQPLITYLDSLKATYQKFYSAIPIVSLDGVSSLKAKGAASPLLWLLS ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCHHHHHHHC NLNDVEIYPPQEDLTDEPSQQSFIAWIPRPKSSKEVLLVSLVSAILLGAIASLFLSFKSL CCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TSIPQQAPTIEQPSNPIKQY HCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLATATTPKTFSLLSIGQRGVGKTVFLAGSYTELSPDSQTNTPQKLWFDCQDTEVQANL CCCCCCCCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHEEECCCCCHHHHHH ENIKNHVARTNLYPPPTIKITNFNFSLKRQIRSSVETVCNFRWWDIPGESCNIHNPDFQE HHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCHHH MILTSSGCCVFINANALINDQNYPHLLEDIYNQVAAIASVVYKYNIKYAFALILTKCDLL HHHCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE ELNPSTLLQIDQHLQPLITYLDSLKATYQKFYSAIPIVSLDGVSSLKAKGAASPLLWLLS ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCHHHHHHHC NLNDVEIYPPQEDLTDEPSQQSFIAWIPRPKSSKEVLLVSLVSAILLGAIASLFLSFKSL CCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TSIPQQAPTIEQPSNPIKQY HCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA