| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232221
Identifier: 17232221
GI number: 17232221
Start: 5635712
End: 5636422
Strand: Reverse
Name: 17232221
Synonym: all4729
Alternate gene names: NA
Gene position: 5636422-5635712 (Counterclockwise)
Preceding gene: 17232222
Following gene: 17232220
Centisome position: 87.88
GC content: 39.24
Gene sequence:
>711_bases ATGACTAACTCCAGTTTTACGAAAGGAAAAAATTCATATCACCACCAAGCGGAAGAACCGCATTTACCGACAAAAATACA GATAAAAAATGGTAGCAAGCATGAAGTTTCTAGGCAGCGAGAACCTAGAAATGATGTATCTATTACTAATGACTTAAATC GAGGTCGAGTAGCTATTTTCATCGATGGTGCTAATCTATTTCAAGCCGCTTTACAACTTGGTATTGAAATCGATTACCTC AAATTACTTTGTCGTTTAACTGCGGGTTCCAGATTATTACGGGCATTTTTCTACACCGGAGTTGATATGTCTCGACCAAC TCCTACACGTCAACGTACCAATGATAAGCAACAAGGTTTTCTCTTTTGGATGCGCCGTAACGGTTATCGTGTTGTCACCA AAGAACTCCAAGTCACAGATAACAACAAAAAACCAAATTTGAACGTAGAAATTGCTGTAGACATGATCACTTTAGCACCA CATTATGATACAGCCGTCTTGGTTAGCGGTGATGGTGATTTAGCATACGCAGTCAACGCAGTCAGTAGTACCGGGGTTCG TGTAGAAGTCGTCAGTTTACGAACAATGACTAACGACTGTTTAATTGATGTCGCCGACTACTTTATTGACCTCGATAGCA TTAAACAATATATCCAAAAGGATTCCCATCTAGGATATGGCTATCGAACATTATCTAATTCTAATCTTTAG
Upstream 100 bases:
>100_bases GTGACTGAATATCATTTATTGTTTTGCTGATTTATCAGCACAGATGGTCTATTGTCTATTGCCTCAAACGCTTCGCCAGA TTTAAAATCCAGAGGACTCA
Downstream 100 bases:
>100_bases GATTTAAAAGTTAGAAATATACGTAGGGTGAGCAATGCCCACTAAAACCTTAATATGGTGGGCATTGCCCACCCTACTGT CTTGAATTTTGAATTGATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIFIDGANLFQAALQLGIEIDYL KLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGFLFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAP HYDTAVLVSGDGDLAYAVNAVSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL
Sequences:
>Translated_236_residues MTNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIFIDGANLFQAALQLGIEIDYL KLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGFLFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAP HYDTAVLVSGDGDLAYAVNAVSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL >Mature_235_residues TNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIFIDGANLFQAALQLGIEIDYLK LLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGFLFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAPH YDTAVLVSGDGDLAYAVNAVSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26675; Mature: 26543
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIF CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEECCCCCCEEEEE IDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGF EECHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCE LFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAPHYDTAVLVSGDGDLAYAVNA EEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCEEEEEEC VSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL CCCCCEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCC >Mature Secondary Structure TNSSFTKGKNSYHHQAEEPHLPTKIQIKNGSKHEVSRQREPRNDVSITNDLNRGRVAIF CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCEEECCCCCCEEEEE IDGANLFQAALQLGIEIDYLKLLCRLTAGSRLLRAFFYTGVDMSRPTPTRQRTNDKQQGF EECHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCE LFWMRRNGYRVVTKELQVTDNNKKPNLNVEIAVDMITLAPHYDTAVLVSGDGDLAYAVNA EEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEECCCCCEEEEEECCCCEEEEEEC VSSTGVRVEVVSLRTMTNDCLIDVADYFIDLDSIKQYIQKDSHLGYGYRTLSNSNL CCCCCEEEEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA