| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232136
Identifier: 17232136
GI number: 17232136
Start: 5547375
End: 5547947
Strand: Reverse
Name: 17232136
Synonym: all4644
Alternate gene names: NA
Gene position: 5547947-5547375 (Counterclockwise)
Preceding gene: 17232137
Following gene: 17232135
Centisome position: 86.5
GC content: 47.64
Gene sequence:
>573_bases ATGACTACTGACCCTAGACTAATGACAAAACTCATATTACTGATTGGTCTTCCTGGTAGCGGTAAGTCAACCTTGGCAAA ACAATTAGTAGCACAATGCCCCCAGATGCAGCTGATTTCCACAGATGCCATCAGGGGGCAACTGTTTGGCTCAGAAGCAA TTCAAGGGTCATGGCTGCTAATTTGGCGGGAGATAGAGCAGCAATTACAGCAAACTGTGATTACAGGTAAAATTGCCCTT TTCGACGCGACCAACGCCCAACGCCGCCATCGTCGTGAACTCATTACCCTAGCCAGTGAATTAGGTTTTACCGACATTAC AGGAGTTTGGATCAAAACACCCGTCTGGTTATGTCTAGCACGCAACAAAAAACGCCCACGCCAAGTCCCCGAAGATGTCA TCTTACGAATGCACCGTCAACTCCGCGATGCACCCCCCATCCTAGAAGAAGGACTAGAACACCTAATTGTCTATGAAAAT ATCTTTTCCCCCATTCATAACTCCCTACTCCCCATTCTCTCCATCGATAAGTACGGAAATTGCCCTGACCCAGTGAGCGG GAACCACACTTGA
Upstream 100 bases:
>100_bases AGTGGCATTGTCGTCGTCCTCAAAAATGCCGTTATTACAGATGGCACAATCATTTAGTCAACAGTCAACAGTCAACAGTT AAGAATTTCAACTTTGACTA
Downstream 100 bases:
>100_bases TTTTCTTTATTATTTGTTAATTTAAAATCAGAATATTTATGGCTTGGCATTAGACCTAGCAAATTCTCAACTTCAAATCT TAGAAGAAAACTTAAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTTDPRLMTKLILLIGLPGSGKSTLAKQLVAQCPQMQLISTDAIRGQLFGSEAIQGSWLLIWREIEQQLQQTVITGKIAL FDATNAQRRHRRELITLASELGFTDITGVWIKTPVWLCLARNKKRPRQVPEDVILRMHRQLRDAPPILEEGLEHLIVYEN IFSPIHNSLLPILSIDKYGNCPDPVSGNHT
Sequences:
>Translated_190_residues MTTDPRLMTKLILLIGLPGSGKSTLAKQLVAQCPQMQLISTDAIRGQLFGSEAIQGSWLLIWREIEQQLQQTVITGKIAL FDATNAQRRHRRELITLASELGFTDITGVWIKTPVWLCLARNKKRPRQVPEDVILRMHRQLRDAPPILEEGLEHLIVYEN IFSPIHNSLLPILSIDKYGNCPDPVSGNHT >Mature_189_residues TTDPRLMTKLILLIGLPGSGKSTLAKQLVAQCPQMQLISTDAIRGQLFGSEAIQGSWLLIWREIEQQLQQTVITGKIALF DATNAQRRHRRELITLASELGFTDITGVWIKTPVWLCLARNKKRPRQVPEDVILRMHRQLRDAPPILEEGLEHLIVYENI FSPIHNSLLPILSIDKYGNCPDPVSGNHT
Specific function: Unknown
COG id: COG4639
COG function: function code R; Predicted kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21447; Mature: 21316
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDPRLMTKLILLIGLPGSGKSTLAKQLVAQCPQMQLISTDAIRGQLFGSEAIQGSWLL CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHH IWREIEQQLQQTVITGKIALFDATNAQRRHRRELITLASELGFTDITGVWIKTPVWLCLA HHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHH RNKKRPRQVPEDVILRMHRQLRDAPPILEEGLEHLIVYENIFSPIHNSLLPILSIDKYGN CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC CPDPVSGNHT CCCCCCCCCC >Mature Secondary Structure TTDPRLMTKLILLIGLPGSGKSTLAKQLVAQCPQMQLISTDAIRGQLFGSEAIQGSWLL CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHH IWREIEQQLQQTVITGKIALFDATNAQRRHRRELITLASELGFTDITGVWIKTPVWLCLA HHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHCCCCHHCHHHHHHHHHHHHH RNKKRPRQVPEDVILRMHRQLRDAPPILEEGLEHLIVYENIFSPIHNSLLPILSIDKYGN CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC CPDPVSGNHT CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA