BacMap

Definition	Nostoc sp. PCC 7120, complete genome.
Accession	NC_003272
Length	6,413,771

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The map label for this gene is dnaJ [C]

Identifier: 17232135

GI number: 17232135

Start: 5546253

End: 5547254

Strand: Reverse

Name: dnaJ [C]

Synonym: all4643

Alternate gene names: 17232135

Gene position: 5547254-5546253 (Counterclockwise)

Preceding gene: 17232136

Following gene: 17232132

Centisome position: 86.49

GC content: 46.71

Gene sequence:

>1002_bases
ATGGCTGCAACCGACTTCAAAGACTATTACGCGATTTTGGGAGTTAGTAAAACTGCCACTCCAGAGGAAATTAAACAAGC
TTTTCGCAAGTTAGCCCGCAAATATCACCCTGATGTCAATCCTGGTAATAAACAGGCGGAAGCAAGCTTCAAGGAAGTTA
ACGAAGCCTACGAAGTTTTATCAGATGCCGACAAACGGAAAAAATACGATCAATTTGGGCAATATTGGCGACAAGTTGGC
GAAGGCTTCCCTGGAGGTGGCGCTGGTGTCGATATGGGTGGAGTGGACTTCAGCCAATACGGCAATTTTGATGAGTTTAT
TAATGAGTTGTTAGGACGCTTTGGTGGTGCTGCACCTCGTGGTGGGCGACAAAGTTACTCTTATCGCACTCCTGGTGGTA
GACCAGGGGGTGGTTTTGGTGGCTTCAACGACTTTGGATTTCAAGATGTAGGCGCAGCAGGCGGTGGTCAAGATGCCGAA
GCTACCATCAGCCTAACTTTTGCTGAAGCTTTTGCTGGAGTTCAAAAGCGCTTTAATTTAGGTAACGAAACTATTGATGT
GCGGATTCCGGCTGGTACTAAACCTGGTACTCGCTTACGGGTAAGAGGTAAGGGTCAATTTAACCCCATGACACAACAAA
GAGGTGACCTATATTTAAAAGTAGAATTTCAGCCCCACTCATTCTTCCAAATTGAAGGGGATAACTTAGCCTGCGAAATT
CCTATTACTCCCGATGAAGCGGCGCTGGGAGCCTCCATTGATGTACCTACACCCGATGGTTCTGTGAACGTTAAACTACC
TGCTGGTGTGCGTTCTGGTCAATCTCTCCGTTTACGGGGTAAGGGCTGGCCTATAGCCAAAGGCGGACGAGGAGATCAGT
TTGTCAAAGTGGCTATTGTGCCACCAAAAGATATGAGCCAACAAGAGCGAGAATACTATGAAAAAATCCGGGCTATCCGC
AGTTACAATCCCCGGAGTCATTTACAACAAGTGAAGTTGTAA

Upstream 100 bases:

>100_bases
TTTAAAATCAGAATATTTATGGCTTGGCATTAGACCTAGCAAATTCTCAACTTCAAATCTTAGAAGAAAACTTAAAGAAA
TTTCTACAGGAGGCTGGTAG

Downstream 100 bases:

>100_bases
TATCCAATTCGGCTGCTTATTTAACTATATAGTTGATTTGGTTGGTAATGGGTAATAGGTAATTGTTTGTCCCATTACCA
ATGCCCAATTACCCATTACC

Product: chaperone DnaJ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MAATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVLSDADKRKKYDQFGQYWRQVG
EGFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPRGGRQSYSYRTPGGRPGGGFGGFNDFGFQDVGAAGGGQDAE
ATISLTFAEAFAGVQKRFNLGNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEI
PITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIVPPKDMSQQEREYYEKIRAIR
SYNPRSHLQQVKL

Sequences:

>Translated_333_residues
MAATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVLSDADKRKKYDQFGQYWRQVG
EGFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPRGGRQSYSYRTPGGRPGGGFGGFNDFGFQDVGAAGGGQDAE
ATISLTFAEAFAGVQKRFNLGNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEI
PITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIVPPKDMSQQEREYYEKIRAIR
SYNPRSHLQQVKL
>Mature_332_residues
AATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVLSDADKRKKYDQFGQYWRQVGE
GFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPRGGRQSYSYRTPGGRPGGGFGGFNDFGFQDVGAAGGGQDAEA
TISLTFAEAFAGVQKRFNLGNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEIP
ITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIVPPKDMSQQEREYYEKIRAIRS
YNPRSHLQQVKL

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI6631085, Length=347, Percent_Identity=30.5475504322767, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI201862587, Length=356, Percent_Identity=29.7752808988764, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI5453690, Length=345, Percent_Identity=27.536231884058, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI201862518, Length=356, Percent_Identity=29.7752808988764, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI56549115, Length=352, Percent_Identity=30.1136363636364, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI205360838, Length=355, Percent_Identity=27.0422535211268, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI205360840, Length=356, Percent_Identity=26.9662921348315, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI24308127, Length=164, Percent_Identity=37.1951219512195, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI21553335, Length=95, Percent_Identity=50.5263157894737, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI9558755, Length=132, Percent_Identity=40.9090909090909, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=63.6363636363636, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=63.6363636363636, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI39204547, Length=329, Percent_Identity=27.355623100304, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI23503241, Length=85, Percent_Identity=54.1176470588235, Blast_Score=86, Evalue=6e-17,
Organism=Homo sapiens, GI47777312, Length=144, Percent_Identity=41.6666666666667, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI45504382, Length=74, Percent_Identity=50, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI7706495, Length=68, Percent_Identity=51.4705882352941, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI88501736, Length=82, Percent_Identity=51.219512195122, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27151736, Length=82, Percent_Identity=51.219512195122, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI194328760, Length=280, Percent_Identity=29.2857142857143, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI194306642, Length=121, Percent_Identity=42.1487603305785, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI194306640, Length=121, Percent_Identity=42.1487603305785, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI194328758, Length=280, Percent_Identity=29.2857142857143, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4504511, Length=66, Percent_Identity=56.0606060606061, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI29126218, Length=74, Percent_Identity=48.6486486486487, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI56687498, Length=75, Percent_Identity=50.6666666666667, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI27735107, Length=80, Percent_Identity=46.25, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI22749377, Length=69, Percent_Identity=52.1739130434783, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI72534740, Length=134, Percent_Identity=36.5671641791045, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI5031741, Length=74, Percent_Identity=48.6486486486487, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1787235, Length=327, Percent_Identity=35.1681957186544, Blast_Score=156, Evalue=1e-39,
Organism=Escherichia coli, GI1786197, Length=382, Percent_Identity=29.8429319371728, Blast_Score=125, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17534355, Length=336, Percent_Identity=32.1428571428571, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17554644, Length=89, Percent_Identity=50.561797752809, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI115532378, Length=81, Percent_Identity=48.1481481481481, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI212645553, Length=68, Percent_Identity=48.5294117647059, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17553096, Length=64, Percent_Identity=54.6875, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17553098, Length=64, Percent_Identity=54.6875, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17554900, Length=145, Percent_Identity=31.0344827586207, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17568643, Length=75, Percent_Identity=46.6666666666667, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538236, Length=67, Percent_Identity=50.7462686567164, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17507263, Length=63, Percent_Identity=50.7936507936508, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI115532476, Length=74, Percent_Identity=43.2432432432432, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323870, Length=67, Percent_Identity=59.7014925373134, Blast_Score=87, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6324265, Length=66, Percent_Identity=60.6060606060606, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6323119, Length=206, Percent_Identity=29.6116504854369, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6320888, Length=135, Percent_Identity=37.7777777777778, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323813, Length=123, Percent_Identity=42.2764227642276, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322194, Length=80, Percent_Identity=46.25, Blast_Score=73, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6322388, Length=108, Percent_Identity=41.6666666666667, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6324321, Length=166, Percent_Identity=24.6987951807229, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI85726398, Length=353, Percent_Identity=29.1784702549575, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24658562, Length=332, Percent_Identity=29.8192771084337, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24658555, Length=332, Percent_Identity=29.8192771084337, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI19920464, Length=340, Percent_Identity=27.3529411764706, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45549272, Length=363, Percent_Identity=30.5785123966942, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI45552813, Length=363, Percent_Identity=30.5785123966942, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI45552811, Length=363, Percent_Identity=30.5785123966942, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI18858081, Length=338, Percent_Identity=28.9940828402367, Blast_Score=88, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24654066, Length=68, Percent_Identity=57.3529411764706, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24654070, Length=68, Percent_Identity=57.3529411764706, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24654068, Length=68, Percent_Identity=57.3529411764706, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24654072, Length=68, Percent_Identity=57.3529411764706, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24646562, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646560, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646558, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646556, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21357547, Length=94, Percent_Identity=47.8723404255319, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17737735, Length=74, Percent_Identity=52.7027027027027, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24668523, Length=74, Percent_Identity=52.7027027027027, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI28574723, Length=74, Percent_Identity=52.7027027027027, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI161077138, Length=64, Percent_Identity=60.9375, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI20129487, Length=112, Percent_Identity=41.0714285714286, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24584014, Length=112, Percent_Identity=41.0714285714286, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24668492, Length=68, Percent_Identity=50, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24641698, Length=64, Percent_Identity=51.5625, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641696, Length=64, Percent_Identity=51.5625, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI21358273, Length=67, Percent_Identity=56.7164179104478, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24651436, Length=74, Percent_Identity=41.8918918918919, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21358311, Length=74, Percent_Identity=41.8918918918919, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24651439, Length=74, Percent_Identity=41.8918918918919, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24584630, Length=69, Percent_Identity=49.2753623188406, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI17648033, Length=69, Percent_Identity=49.2753623188406, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 36379; Mature: 36248

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVL
CCCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
SDADKRKKYDQFGQYWRQVGEGFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCC
GGRQSYSYRTPGGRPGGGFGGFNDFGFQDVGAAGGGQDAEATISLTFAEAFAGVQKRFNL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCC
GNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEI
CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEE
PITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIV
CCCCCHHHCCCEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
PPKDMSQQEREYYEKIRAIRSYNPRSHLQQVKL
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC
>Mature Secondary Structure 
AATDFKDYYAILGVSKTATPEEIKQAFRKLARKYHPDVNPGNKQAEASFKEVNEAYEVL
CCCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
SDADKRKKYDQFGQYWRQVGEGFPGGGAGVDMGGVDFSQYGNFDEFINELLGRFGGAAPR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCC
GGRQSYSYRTPGGRPGGGFGGFNDFGFQDVGAAGGGQDAEATISLTFAEAFAGVQKRFNL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCC
GNETIDVRIPAGTKPGTRLRVRGKGQFNPMTQQRGDLYLKVEFQPHSFFQIEGDNLACEI
CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCEEEEE
PITPDEAALGASIDVPTPDGSVNVKLPAGVRSGQSLRLRGKGWPIAKGGRGDQFVKVAIV
CCCCCHHHCCCEEECCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEE
PPKDMSQQEREYYEKIRAIRSYNPRSHLQQVKL
CCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]