| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17232072
Identifier: 17232072
GI number: 17232072
Start: 5476608
End: 5477684
Strand: Reverse
Name: 17232072
Synonym: all4580
Alternate gene names: NA
Gene position: 5477684-5476608 (Counterclockwise)
Preceding gene: 17232073
Following gene: 17232070
Centisome position: 85.41
GC content: 45.59
Gene sequence:
>1077_bases GTGCAGTTGTTTGATTTGGTGGAAGCTGTAGATCAGTTTTTCGCTGACACCCAAACTTTACCGGAGTTATCACTAGAATT ACAACCAGTTACTAGACGTTATGGTGGTGCTAGTCAACTTGTCCTGAAACAGGCAGTACCTGCAACTATTGGTGTTTCCA GTTTAGCTGTAGCAGCGATCGCCTTTAGTCTCATTCCTGCGCCACAAATACGTGTACCAGAGCCAAAACCAGAGGAGCAA ACTAATTCCAATACTCCCACCACCAATCCCACCCCTGCATCAACAACCACACCCATAGCAGCAGCAACTCCCACAGCAAC GGCTGTAACCATCCCAGAAGCAACTCCCACCGCCACACCCGCAGCCACAACACAACCCACCGTTAAAGATTTAGAAGCGC TTTTAAATACAGTCACAGAAATCACCGATCCTTCCCAACTTCGGGCATTAAATCGGCAAGTTTGGAACCAAATCGAGCCA GCTTGGAATAGTCGTTCCGCCGTGAAGGAAAATTTAATTTACCGTGTTGGTGTGGCTGCGGATGGAGCCATTGTAGGTTA TAAAGCAGTGAATCAAGGAGCAAATGCAGGGATTGAATTAACACCTCTGCCCAACTTACTTTATAATCCGGCGAACCGTC CCCCCATTGCCAATGAACCGATCGCCCAATTTAAAGTAGTATTTACCAACAATGGCGTACTAGAAGTTAGTCCTTGGCGT GGTTATGTCAGAACACCAGAAGTAATCGGGGCAAAAATTACCGATACTAACACCGTCAAAGATTTGAACCAAAGACTTTT CGATACAGTACGTCAAAATTGGAGTGGTAAGCCCACCTTTACTAAAGATTTGAAGTATCGAGTAGCCGTCACCAAAGAAG GCACAATTGCTGACTATGAACCTCTAAATCAAGTAGCTTTTGACTATTTCCGCGAAACACCTTTACCCAGAATGTTCCAA GCTGTTTACGGTTCCAATGCAGCCGCACCTAACAACAAGGAACCTCTTGCACACTACCAAGTAGTCTTTCAACCCAGTGG CAAATTAGAAGTCACTCCTTGGCAGGGATATAGGTAA
Upstream 100 bases:
>100_bases TAATCACCACAAGTTAATCGTACATTCTGAGAATGCGCCAGAGGAATTTAATACAAACGCTAATTATAATAAACAACCAA TTGAAATAGATTTAAATACG
Downstream 100 bases:
>100_bases CTGGGGATTGGAAATTGGGGATTGGGGATTAGGCATGAGGGATTGGGGAGAGAAAATGATTACTCAGCACTGCCTACACC CCTGCTAACAGCACTCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MQLFDLVEAVDQFFADTQTLPELSLELQPVTRRYGGASQLVLKQAVPATIGVSSLAVAAIAFSLIPAPQIRVPEPKPEEQ TNSNTPTTNPTPASTTTPIAAATPTATAVTIPEATPTATPAATTQPTVKDLEALLNTVTEITDPSQLRALNRQVWNQIEP AWNSRSAVKENLIYRVGVAADGAIVGYKAVNQGANAGIELTPLPNLLYNPANRPPIANEPIAQFKVVFTNNGVLEVSPWR GYVRTPEVIGAKITDTNTVKDLNQRLFDTVRQNWSGKPTFTKDLKYRVAVTKEGTIADYEPLNQVAFDYFRETPLPRMFQ AVYGSNAAAPNNKEPLAHYQVVFQPSGKLEVTPWQGYR
Sequences:
>Translated_358_residues MQLFDLVEAVDQFFADTQTLPELSLELQPVTRRYGGASQLVLKQAVPATIGVSSLAVAAIAFSLIPAPQIRVPEPKPEEQ TNSNTPTTNPTPASTTTPIAAATPTATAVTIPEATPTATPAATTQPTVKDLEALLNTVTEITDPSQLRALNRQVWNQIEP AWNSRSAVKENLIYRVGVAADGAIVGYKAVNQGANAGIELTPLPNLLYNPANRPPIANEPIAQFKVVFTNNGVLEVSPWR GYVRTPEVIGAKITDTNTVKDLNQRLFDTVRQNWSGKPTFTKDLKYRVAVTKEGTIADYEPLNQVAFDYFRETPLPRMFQ AVYGSNAAAPNNKEPLAHYQVVFQPSGKLEVTPWQGYR >Mature_358_residues MQLFDLVEAVDQFFADTQTLPELSLELQPVTRRYGGASQLVLKQAVPATIGVSSLAVAAIAFSLIPAPQIRVPEPKPEEQ TNSNTPTTNPTPASTTTPIAAATPTATAVTIPEATPTATPAATTQPTVKDLEALLNTVTEITDPSQLRALNRQVWNQIEP AWNSRSAVKENLIYRVGVAADGAIVGYKAVNQGANAGIELTPLPNLLYNPANRPPIANEPIAQFKVVFTNNGVLEVSPWR GYVRTPEVIGAKITDTNTVKDLNQRLFDTVRQNWSGKPTFTKDLKYRVAVTKEGTIADYEPLNQVAFDYFRETPLPRMFQ AVYGSNAAAPNNKEPLAHYQVVFQPSGKLEVTPWQGYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38991; Mature: 38991
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLFDLVEAVDQFFADTQTLPELSLELQPVTRRYGGASQLVLKQAVPATIGVSSLAVAAI CCHHHHHHHHHHHHHCCCCCCHHCEEEEHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHH AFSLIPAPQIRVPEPKPEEQTNSNTPTTNPTPASTTTPIAAATPTATAVTIPEATPTATP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCC AATTQPTVKDLEALLNTVTEITDPSQLRALNRQVWNQIEPAWNSRSAVKENLIYRVGVAA CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEECC DGAIVGYKAVNQGANAGIELTPLPNLLYNPANRPPIANEPIAQFKVVFTNNGVLEVSPWR CCCEEEHHHHCCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHEEEEEEECCCEEEECCCC GYVRTPEVIGAKITDTNTVKDLNQRLFDTVRQNWSGKPTFTKDLKYRVAVTKEGTIADYE CCCCCHHHHCEEECCCHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECCCCCCCCC PLNQVAFDYFRETPLPRMFQAVYGSNAAAPNNKEPLAHYQVVFQPSGKLEVTPWQGYR HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCC >Mature Secondary Structure MQLFDLVEAVDQFFADTQTLPELSLELQPVTRRYGGASQLVLKQAVPATIGVSSLAVAAI CCHHHHHHHHHHHHHCCCCCCHHCEEEEHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHH AFSLIPAPQIRVPEPKPEEQTNSNTPTTNPTPASTTTPIAAATPTATAVTIPEATPTATP HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEECCCCCCCCCC AATTQPTVKDLEALLNTVTEITDPSQLRALNRQVWNQIEPAWNSRSAVKENLIYRVGVAA CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEEECC DGAIVGYKAVNQGANAGIELTPLPNLLYNPANRPPIANEPIAQFKVVFTNNGVLEVSPWR CCCEEEHHHHCCCCCCCEEECCCCHHHCCCCCCCCCCCCCHHEEEEEEECCCEEEECCCC GYVRTPEVIGAKITDTNTVKDLNQRLFDTVRQNWSGKPTFTKDLKYRVAVTKEGTIADYE CCCCCHHHHCEEECCCHHHHHHHHHHHHHHHHCCCCCCCEECCCEEEEEEECCCCCCCCC PLNQVAFDYFRETPLPRMFQAVYGSNAAAPNNKEPLAHYQVVFQPSGKLEVTPWQGYR HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA