Definition Nostoc sp. PCC 7120, complete genome.
Accession NC_003272
Length 6,413,771

Click here to switch to the map view.

The map label for this gene is 17231989

Identifier: 17231989

GI number: 17231989

Start: 5386601

End: 5387203

Strand: Reverse

Name: 17231989

Synonym: all4497

Alternate gene names: NA

Gene position: 5387203-5386601 (Counterclockwise)

Preceding gene: 17231991

Following gene: 17231988

Centisome position: 83.99

GC content: 44.78

Gene sequence:

>603_bases
ATGGAGCCAAAAGTTGAGATACGCCGTTTATTTGAAGTGATGCCAGCTTCTGGTAGGATGACGATTAAAATTGTCAGCAA
ACCAGAACAAAATCAAGTAATTGACCCGATTTTTCCCTTGCCCTGGAATCAAGAGAGGCTAATATATATAAACTTCGATT
TATGGGAACGCTTGACCAAACCACAACGGGATTTGCTAATCTTGCAAAAGGTTGCTTGGTTGACAGGGGTCAGGTGGTTT
ACACCAAATATTTATCAGGGTGTGGTGTTAGCAGGACTTTTGGGCGGATTGGTGGAATCTGCACAGGCTGATGTGGTGGG
TGTGGCGATCGCTGGGGGATTGAGTGCGATCGCTTTGTTGCGGATCTGGCGTAGCAACAAATCTCCAGAATTTGAGTTAA
ATGCTGACATAGCAGCGATTAAAGTTGCTCAACGCCGTGGTTATTCTGAAGCCGAAGCAGCACAAAATTTACTATGGGCG
ATTGAGTCAGTGGCCAAGATAGAAGGGCGTTCTAGCTTAGATTTTATCGCTTTGATTCGTTGCCAAAACTTACGAGCGAT
CGCTGGTCTTTCACCAGTGGGTGTACCAGAAAAGTTTCTATAA

Upstream 100 bases:

>100_bases
TATTTTTTTTCAAGTTGGTATAACTTTTTAAACCTAGAAGCCACCAAGGTACAGAAAACTCTGTATCTTAATTACGAAAC
ACGAATTACAAATTATTCCT

Downstream 100 bases:

>100_bases
TTTACGACAGAATTTAGTGTATCGCTGGTTATGAAGCTGGTTTGTCATCTAGAATAGAAACCGATTGCTAAAGATTATTT
CTTCCAACATTCCCGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTKPQRDLLILQKVAWLTGVRWF
TPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALLRIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWA
IESVAKIEGRSSLDFIALIRCQNLRAIAGLSPVGVPEKFL

Sequences:

>Translated_200_residues
MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTKPQRDLLILQKVAWLTGVRWF
TPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALLRIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWA
IESVAKIEGRSSLDFIALIRCQNLRAIAGLSPVGVPEKFL
>Mature_200_residues
MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTKPQRDLLILQKVAWLTGVRWF
TPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALLRIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWA
IESVAKIEGRSSLDFIALIRCQNLRAIAGLSPVGVPEKFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22301; Mature: 22301

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTK
CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCC
PQRDLLILQKVAWLTGVRWFTPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALL
CHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
RIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWAIESVAKIEGRSSLDFIALIR
HHHHCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
CQNLRAIAGLSPVGVPEKFL
CCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTK
CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCC
PQRDLLILQKVAWLTGVRWFTPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALL
CHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
RIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWAIESVAKIEGRSSLDFIALIR
HHHHCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
CQNLRAIAGLSPVGVPEKFL
CCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA