| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
Click here to switch to the map view.
The map label for this gene is 17231989
Identifier: 17231989
GI number: 17231989
Start: 5386601
End: 5387203
Strand: Reverse
Name: 17231989
Synonym: all4497
Alternate gene names: NA
Gene position: 5387203-5386601 (Counterclockwise)
Preceding gene: 17231991
Following gene: 17231988
Centisome position: 83.99
GC content: 44.78
Gene sequence:
>603_bases ATGGAGCCAAAAGTTGAGATACGCCGTTTATTTGAAGTGATGCCAGCTTCTGGTAGGATGACGATTAAAATTGTCAGCAA ACCAGAACAAAATCAAGTAATTGACCCGATTTTTCCCTTGCCCTGGAATCAAGAGAGGCTAATATATATAAACTTCGATT TATGGGAACGCTTGACCAAACCACAACGGGATTTGCTAATCTTGCAAAAGGTTGCTTGGTTGACAGGGGTCAGGTGGTTT ACACCAAATATTTATCAGGGTGTGGTGTTAGCAGGACTTTTGGGCGGATTGGTGGAATCTGCACAGGCTGATGTGGTGGG TGTGGCGATCGCTGGGGGATTGAGTGCGATCGCTTTGTTGCGGATCTGGCGTAGCAACAAATCTCCAGAATTTGAGTTAA ATGCTGACATAGCAGCGATTAAAGTTGCTCAACGCCGTGGTTATTCTGAAGCCGAAGCAGCACAAAATTTACTATGGGCG ATTGAGTCAGTGGCCAAGATAGAAGGGCGTTCTAGCTTAGATTTTATCGCTTTGATTCGTTGCCAAAACTTACGAGCGAT CGCTGGTCTTTCACCAGTGGGTGTACCAGAAAAGTTTCTATAA
Upstream 100 bases:
>100_bases TATTTTTTTTCAAGTTGGTATAACTTTTTAAACCTAGAAGCCACCAAGGTACAGAAAACTCTGTATCTTAATTACGAAAC ACGAATTACAAATTATTCCT
Downstream 100 bases:
>100_bases TTTACGACAGAATTTAGTGTATCGCTGGTTATGAAGCTGGTTTGTCATCTAGAATAGAAACCGATTGCTAAAGATTATTT CTTCCAACATTCCCGATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTKPQRDLLILQKVAWLTGVRWF TPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALLRIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWA IESVAKIEGRSSLDFIALIRCQNLRAIAGLSPVGVPEKFL
Sequences:
>Translated_200_residues MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTKPQRDLLILQKVAWLTGVRWF TPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALLRIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWA IESVAKIEGRSSLDFIALIRCQNLRAIAGLSPVGVPEKFL >Mature_200_residues MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTKPQRDLLILQKVAWLTGVRWF TPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALLRIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWA IESVAKIEGRSSLDFIALIRCQNLRAIAGLSPVGVPEKFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22301; Mature: 22301
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTK CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCC PQRDLLILQKVAWLTGVRWFTPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALL CHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH RIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWAIESVAKIEGRSSLDFIALIR HHHHCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE CQNLRAIAGLSPVGVPEKFL CCCCHHHCCCCCCCCCCCCC >Mature Secondary Structure MEPKVEIRRLFEVMPASGRMTIKIVSKPEQNQVIDPIFPLPWNQERLIYINFDLWERLTK CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCC PQRDLLILQKVAWLTGVRWFTPNIYQGVVLAGLLGGLVESAQADVVGVAIAGGLSAIALL CHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH RIWRSNKSPEFELNADIAAIKVAQRRGYSEAEAAQNLLWAIESVAKIEGRSSLDFIALIR HHHHCCCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE CQNLRAIAGLSPVGVPEKFL CCCCHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA