Click here to switch to the map view.

The map label for this gene is rfbU [H]

Identifier: 17231986

GI number: 17231986

Start: 5380744

End: 5381811

Strand: Direct

Name: rfbU [H]

Synonym: alr4494

Alternate gene names: 17231986

Gene position: 5380744-5381811 (Clockwise)

Preceding gene: 17231985

Following gene: 17231990

Centisome position: 83.89

GC content: 38.3

Gene sequence:

>1068_bases
ATGACTGTATTGGTAAACTTATCTTTTGCACCCTTAAAGCCAACTGGATGGTTAACCTATAGTCTCAATTTGTTACCACA
TATTAAATCTTTAGGTATTAATGTTGTCAGTCCCATTGCAATTGACAATATAAAAGTTTATTCATCCCCAACTAATATTA
CAACTGAGGGAGGAATTAAAGGACATTTTCAAAGGTTGATGTGGGTGCAGTTGCAACTACCTAGTTTTTACAACCGATTA
AAGTCTCGATTATTATTTTCACCTATTCCTGAAGTTCCTTTATTTTCTAGTTGTCGCAGTGTTGTTACTATTCATGATTT
AATCCCTTTAAGATTTCCCCAGGAATTTTCTGCGGCGCAACTTTTTTACTGCCGTAATTATCTACCTGCGGTGATTAAGC
AGTCAGAGCATATTATTTGTAATTCCTTGATTACGGCTCATGATATCCAGCGTTTTCTAGGTGTTTCAGAAAAGAAAGTA
ACTGTAATTCCTTTAGCTATTGATCAGCAAAATTTTCGTTTTTTGGACTTGCCGAGAAAAAATTATTTCTTGTATTATGG
GCGACATAATATTTATAAAAATTTAAATCGAATTATTGCCGCTTTTGCTGCTTTACCAAATAAGGATTATGAACTGTGGT
TAGCAGGGCCGACTGATGCACGTTATACCCCGACGTTGCAGGCAAAAGTTGAGGAACTAGGGATAACTGATCGTGTGAAG
TTCCTTGATTATGTTTCTTATGATGAATTACCTATCATTATTAATCAAGCGATCGCACTTGTTTTCCCCAGTCTTTGGGA
AGGCTTTGGTTTTCCAGTCTTAGAAGCCTTGGCCTGCGGTACTCCTGTCATTACCTCTAACCTCTCTTCCTTACCTGAAG
TGGCTGGAGATGCAGCCATCCTCATCAACCCCTACAACACAGCAGAAATCACAGATGCCATGCAGACTATAGCTAATGAT
GTCAAATTGCAATCCCATCTGTCTCGCCAAGGAATCGCTAGAGCCAATCAATTCAGTTGGGAAAGAACAGGTAAAGCAAC
GAGTGAAGTCTTATCTCGTTATCTTTGA

Upstream 100 bases:

>100_bases
TTTTTGGCAACAAGAAATCCTTACAGTTTAGAAATAATAAAATTATTATTCGTAATAGCTTAAATATACTAAGCTATTTT
GATACTTAATTTAGCCAGTT

Downstream 100 bases:

>100_bases
ATTAGGGACTGGGGACGAGAGGAAGAAAAACTATTGACCATTGACTATTGACTAATGACTAATCCACCTTTTGTAATTGG
GCGACTCTAGGGTCAACAAT

Product: mannosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MTVLVNLSFAPLKPTGWLTYSLNLLPHIKSLGINVVSPIAIDNIKVYSSPTNITTEGGIKGHFQRLMWVQLQLPSFYNRL
KSRLLFSPIPEVPLFSSCRSVVTIHDLIPLRFPQEFSAAQLFYCRNYLPAVIKQSEHIICNSLITAHDIQRFLGVSEKKV
TVIPLAIDQQNFRFLDLPRKNYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPTDARYTPTLQAKVEELGITDRVK
FLDYVSYDELPIIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAILINPYNTAEITDAMQTIAND
VKLQSHLSRQGIARANQFSWERTGKATSEVLSRYL

Sequences:

>Translated_355_residues
MTVLVNLSFAPLKPTGWLTYSLNLLPHIKSLGINVVSPIAIDNIKVYSSPTNITTEGGIKGHFQRLMWVQLQLPSFYNRL
KSRLLFSPIPEVPLFSSCRSVVTIHDLIPLRFPQEFSAAQLFYCRNYLPAVIKQSEHIICNSLITAHDIQRFLGVSEKKV
TVIPLAIDQQNFRFLDLPRKNYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPTDARYTPTLQAKVEELGITDRVK
FLDYVSYDELPIIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAILINPYNTAEITDAMQTIAND
VKLQSHLSRQGIARANQFSWERTGKATSEVLSRYL
>Mature_354_residues
TVLVNLSFAPLKPTGWLTYSLNLLPHIKSLGINVVSPIAIDNIKVYSSPTNITTEGGIKGHFQRLMWVQLQLPSFYNRLK
SRLLFSPIPEVPLFSSCRSVVTIHDLIPLRFPQEFSAAQLFYCRNYLPAVIKQSEHIICNSLITAHDIQRFLGVSEKKVT
VIPLAIDQQNFRFLDLPRKNYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPTDARYTPTLQAKVEELGITDRVKF
LDYVSYDELPIIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAILINPYNTAEITDAMQTIANDV
KLQSHLSRQGIARANQFSWERTGKATSEVLSRYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 39990; Mature: 39859

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVLVNLSFAPLKPTGWLTYSLNLLPHIKSLGINVVSPIAIDNIKVYSSPTNITTEGGIK
CEEEEEEEECCCCCCCEEEEEEEHHHHHHHCCCCEECCEEECCEEEEECCCCCEECCCCH
GHFQRLMWVQLQLPSFYNRLKSRLLFSPIPEVPLFSSCRSVVTIHDLIPLRFPQEFSAAQ
HHHHHEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEHHHHHCCCCCCCCCHHH
LFYCRNYLPAVIKQSEHIICNSLITAHDIQRFLGVSEKKVTVIPLAIDQQNFRFLDLPRK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCC
NYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPTDARYTPTLQAKVEELGITDRVK
CEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHH
FLDYVSYDELPIIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAI
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCHHHHHHHCCCCEE
LINPYNTAEITDAMQTIANDVKLQSHLSRQGIARANQFSWERTGKATSEVLSRYL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
TVLVNLSFAPLKPTGWLTYSLNLLPHIKSLGINVVSPIAIDNIKVYSSPTNITTEGGIK
EEEEEEEECCCCCCCEEEEEEEHHHHHHHCCCCEECCEEECCEEEEECCCCCEECCCCH
GHFQRLMWVQLQLPSFYNRLKSRLLFSPIPEVPLFSSCRSVVTIHDLIPLRFPQEFSAAQ
HHHHHEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEHHHHHCCCCCCCCCHHH
LFYCRNYLPAVIKQSEHIICNSLITAHDIQRFLGVSEKKVTVIPLAIDQQNFRFLDLPRK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCC
NYFLYYGRHNIYKNLNRIIAAFAALPNKDYELWLAGPTDARYTPTLQAKVEELGITDRVK
CEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCHHHHH
FLDYVSYDELPIIINQAIALVFPSLWEGFGFPVLEALACGTPVITSNLSSLPEVAGDAAI
HHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHCHHHHHHHCCCCEE
LINPYNTAEITDAMQTIANDVKLQSHLSRQGIARANQFSWERTGKATSEVLSRYL
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]