| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is wcaA [C]
Identifier: 17231933
GI number: 17231933
Start: 5323720
End: 5324733
Strand: Reverse
Name: wcaA [C]
Synonym: all4441
Alternate gene names: 17231933
Gene position: 5324733-5323720 (Counterclockwise)
Preceding gene: 17231934
Following gene: 17231932
Centisome position: 83.02
GC content: 41.42
Gene sequence:
>1014_bases ATGAGTAATTTGCCTTTGATTAGCGTAGTCATACCAACCTACGGGCGAGAGGAAATCCTCAGGGATAGCATTGTCGATGT CTTAAATCAGGATTATCCCAAATATGAAGTTTTGGTAGTAGACCAGTCGCCAAAACACAAACCAGAAATCGAAACTTACT TAGAAGAAGTAGCCGCAGCAGGTAAAGTTAAGTGGTTTCGCTTAGATTGGGCTAGTTTGCCAGGCGCGCGTAATTATGCT ATACGGCGAGCATCTGGAGAAATAATTTTATTTATTGATGATGATGTCAAATTAAAGCCCGGATTTTTAGCAGCCCATGC AAAAAATTACGTACAAAATCCCGATGTAGGATCTGTAGCGGGTAGGGTATTTGACAGAATGAAATTAGGTGATTCTGGTG GAAATTTGGAGATTGAATATCTCCCACCTGAAGCGATGGACCCAGGAGTCGCTTGGTATCATATTGACTTAGTGCATACA ATTAAACCCCAGCAAGTGTTGACGGCTAGGGGGTGTAATATGTCTTTCCGTCGGGAAATTTTTACTAAGCACGGACTCAG GTTTGATGAAAGGTTTCGCGGTAGTGCAGTCCGCGAAGAGTCAGACTTTTGTTTAAGGTTGCGGCAGACAGGGTATAAAA TTTGGTATGACCCAGAGGCAGATTTAATCCACTTAGGGGAAGAAACAGGAGGTTGCCATGATATTAGTATGCGATCGCTC AAATATCAGTTCACTTTCTATCACAATCATTTCCTATTAGGATTGAAAAATCTCAATTTTAGCCAAGCTTTACGCCTATA CGCCCGTTTATTTGATTGTCACGTCCTTGGTCGTCCCCCTTGTCACAAAAGCGGTTCTCCCATCAAAATTATCACCCGTG GCATATTCTATATCTTAGGTTTTTTCAGAGCCTTAGGGAGTGTTATCCAGTCAAATTGGCATGATGGTCAAATTTATAGT CGTCTTGATCAAGAATCAATTATCAAGAGTCAAGAGTCAATGGTCAATAGCTAA
Upstream 100 bases:
>100_bases GATAGACTAGACTCTCACTATACGAGAAATAAATATGACAAGGTTATTTATGGCAGACTATTCTCTCAGCAAACAAATTT AAACTAGGTGGAAAGTCGTT
Downstream 100 bases:
>100_bases TGACAACTGACAACTAACAACTAACAAATACTTATGAAAATTTTAGTTGCCAGTCATACTTATATTGTAGACCTCAACTG TGAAAAACTAAGGGCTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Family 2 Glycosyl Transferase; Glycosyl Transferase; Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycoside Hydrolase Family 2 Protein; Glycosyl Transferase Family 2 Protein; Family Glycosyltransferase; FkbM Family Methyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glucosaminyltransferase; Group 2 Glycosyl Transferase
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSNLPLISVVIPTYGREEILRDSIVDVLNQDYPKYEVLVVDQSPKHKPEIETYLEEVAAAGKVKWFRLDWASLPGARNYA IRRASGEIILFIDDDVKLKPGFLAAHAKNYVQNPDVGSVAGRVFDRMKLGDSGGNLEIEYLPPEAMDPGVAWYHIDLVHT IKPQQVLTARGCNMSFRREIFTKHGLRFDERFRGSAVREESDFCLRLRQTGYKIWYDPEADLIHLGEETGGCHDISMRSL KYQFTFYHNHFLLGLKNLNFSQALRLYARLFDCHVLGRPPCHKSGSPIKIITRGIFYILGFFRALGSVIQSNWHDGQIYS RLDQESIIKSQESMVNS
Sequences:
>Translated_337_residues MSNLPLISVVIPTYGREEILRDSIVDVLNQDYPKYEVLVVDQSPKHKPEIETYLEEVAAAGKVKWFRLDWASLPGARNYA IRRASGEIILFIDDDVKLKPGFLAAHAKNYVQNPDVGSVAGRVFDRMKLGDSGGNLEIEYLPPEAMDPGVAWYHIDLVHT IKPQQVLTARGCNMSFRREIFTKHGLRFDERFRGSAVREESDFCLRLRQTGYKIWYDPEADLIHLGEETGGCHDISMRSL KYQFTFYHNHFLLGLKNLNFSQALRLYARLFDCHVLGRPPCHKSGSPIKIITRGIFYILGFFRALGSVIQSNWHDGQIYS RLDQESIIKSQESMVNS >Mature_336_residues SNLPLISVVIPTYGREEILRDSIVDVLNQDYPKYEVLVVDQSPKHKPEIETYLEEVAAAGKVKWFRLDWASLPGARNYAI RRASGEIILFIDDDVKLKPGFLAAHAKNYVQNPDVGSVAGRVFDRMKLGDSGGNLEIEYLPPEAMDPGVAWYHIDLVHTI KPQQVLTARGCNMSFRREIFTKHGLRFDERFRGSAVREESDFCLRLRQTGYKIWYDPEADLIHLGEETGGCHDISMRSLK YQFTFYHNHFLLGLKNLNFSQALRLYARLFDCHVLGRPPCHKSGSPIKIITRGIFYILGFFRALGSVIQSNWHDGQIYSR LDQESIIKSQESMVNS
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38570; Mature: 38438
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNLPLISVVIPTYGREEILRDSIVDVLNQDYPKYEVLVVDQSPKHKPEIETYLEEVAAA CCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHC GKVKWFRLDWASLPGARNYAIRRASGEIILFIDDDVKLKPGFLAAHAKNYVQNPDVGSVA CCEEEEEEEHHHCCCCCCEEEEECCCCEEEEECCCCEECCCCHHHHHHHHCCCCCHHHHH GRVFDRMKLGDSGGNLEIEYLPPEAMDPGVAWYHIDLVHTIKPQQVLTARGCNMSFRREI HHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCHHHHHHCCCCHHHHHHH FTKHGLRFDERFRGSAVREESDFCLRLRQTGYKIWYDPEADLIHLGEETGGCHDISMRSL HHHCCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEECCCCCCEEEEEEEEE KYQFTFYHNHFLLGLKNLNFSQALRLYARLFDCHVLGRPPCHKSGSPIKIITRGIFYILG EEEEEEEECEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH FFRALGSVIQSNWHDGQIYSRLDQESIIKSQESMVNS HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCC >Mature Secondary Structure SNLPLISVVIPTYGREEILRDSIVDVLNQDYPKYEVLVVDQSPKHKPEIETYLEEVAAA CCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHC GKVKWFRLDWASLPGARNYAIRRASGEIILFIDDDVKLKPGFLAAHAKNYVQNPDVGSVA CCEEEEEEEHHHCCCCCCEEEEECCCCEEEEECCCCEECCCCHHHHHHHHCCCCCHHHHH GRVFDRMKLGDSGGNLEIEYLPPEAMDPGVAWYHIDLVHTIKPQQVLTARGCNMSFRREI HHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCHHHHHHCCCCHHHHHHH FTKHGLRFDERFRGSAVREESDFCLRLRQTGYKIWYDPEADLIHLGEETGGCHDISMRSL HHHCCCCHHHHHCCCCCCCCHHHHHHHHHCCCEEEECCCCCEEEECCCCCCEEEEEEEEE KYQFTFYHNHFLLGLKNLNFSQALRLYARLFDCHVLGRPPCHKSGSPIKIITRGIFYILG EEEEEEEECEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH FFRALGSVIQSNWHDGQIYSRLDQESIIKSQESMVNS HHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA