| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231932
Identifier: 17231932
GI number: 17231932
Start: 5323168
End: 5323686
Strand: Reverse
Name: 17231932
Synonym: all4440
Alternate gene names: NA
Gene position: 5323686-5323168 (Counterclockwise)
Preceding gene: 17231933
Following gene: 17231929
Centisome position: 83.0
GC content: 35.84
Gene sequence:
>519_bases ATGAAAATTTTAGTTGCCAGTCATACTTATATTGTAGACCTCAACTGTGAAAAACTAAGGGCTTTATCTCAATTAGAACC GGGAATTGAAGTCACAGTTGTAGTTCCTAAAACCTGGAAACCTGGTGGCGTTCAAAACAAAATTATTGAAACCCAGTACC GTGATGAAGGTGCTTTTAAGATAGTTCCAGTTTCCAATTTTAGTCAAAATCATCAAGGCCTACTTACTTTTGGGGCTGAT TTAATATCTTTATTAAAGCAATTTCGCCCCCAAATTATTCAAGTAGAACAAGGCTCTAGGGGTCTTGCATATGCTCAAAT GATTGCCTTAAATCAATTATTAGGTCTGAAGGCAAAAAACATCTTTTTTACTTGGTGGAATTTACCTTACGAGTTAAAAC TACCAATTGCTTTATTAGAAAAGTATAACCTTAACCATAGCCACGGCATTATTTCTGGCAATCAAGATGGCGCTGGGGTT TTAAGACAACGGGGATATAAGAGACCATTTATAAAGTAA
Upstream 100 bases:
>100_bases TCAAATTTATAGTCGTCTTGATCAAGAATCAATTATCAAGAGTCAAGAGTCAATGGTCAATAGCTAATGACAACTGACAA CTAACAACTAACAAATACTT
Downstream 100 bases:
>100_bases ATCTTTAGACGACTAGACGACGTAGCATAATACGAGTCATAACGGCATATATGGCAGCCTCACTCATTTCTGGGAGACGC TCATAATCCTTACTGAGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKILVASHTYIVDLNCEKLRALSQLEPGIEVTVVVPKTWKPGGVQNKIIETQYRDEGAFKIVPVSNFSQNHQGLLTFGAD LISLLKQFRPQIIQVEQGSRGLAYAQMIALNQLLGLKAKNIFFTWWNLPYELKLPIALLEKYNLNHSHGIISGNQDGAGV LRQRGYKRPFIK
Sequences:
>Translated_172_residues MKILVASHTYIVDLNCEKLRALSQLEPGIEVTVVVPKTWKPGGVQNKIIETQYRDEGAFKIVPVSNFSQNHQGLLTFGAD LISLLKQFRPQIIQVEQGSRGLAYAQMIALNQLLGLKAKNIFFTWWNLPYELKLPIALLEKYNLNHSHGIISGNQDGAGV LRQRGYKRPFIK >Mature_172_residues MKILVASHTYIVDLNCEKLRALSQLEPGIEVTVVVPKTWKPGGVQNKIIETQYRDEGAFKIVPVSNFSQNHQGLLTFGAD LISLLKQFRPQIIQVEQGSRGLAYAQMIALNQLLGLKAKNIFFTWWNLPYELKLPIALLEKYNLNHSHGIISGNQDGAGV LRQRGYKRPFIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19427; Mature: 19427
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILVASHTYIVDLNCEKLRALSQLEPGIEVTVVVPKTWKPGGVQNKIIETQYRDEGAFK CEEEEECCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEE IVPVSNFSQNHQGLLTFGADLISLLKQFRPQIIQVEQGSRGLAYAQMIALNQLLGLKAKN EEECCCCCCCCCEEEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCE IFFTWWNLPYELKLPIALLEKYNLNHSHGIISGNQDGAGVLRQRGYKRPFIK EEEEEECCCEEEECHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MKILVASHTYIVDLNCEKLRALSQLEPGIEVTVVVPKTWKPGGVQNKIIETQYRDEGAFK CEEEEECCEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCEE IVPVSNFSQNHQGLLTFGADLISLLKQFRPQIIQVEQGSRGLAYAQMIALNQLLGLKAKN EEECCCCCCCCCEEEEHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCE IFFTWWNLPYELKLPIALLEKYNLNHSHGIISGNQDGAGVLRQRGYKRPFIK EEEEEECCCEEEECHHHHHHHCCCCCCCCEEECCCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA