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The map label for this gene is yibD [C]

Identifier: 17231923

GI number: 17231923

Start: 5310064

End: 5311017

Strand: Reverse

Name: yibD [C]

Synonym: all4431

Alternate gene names: 17231923

Gene position: 5311017-5310064 (Counterclockwise)

Preceding gene: 17231924

Following gene: 17231922

Centisome position: 82.81

GC content: 30.61

Gene sequence:

>954_bases
ATGGATACAAAAAAAATCAAAACGTCTTGCTTAATTAATAATTATAATTACGCAGCATTTCTGTCAGAAGCAGTTGCTAG
TACTTTACGGCAGACAGTTAAATTTGATGAAATTATTATTGTTGATGACGCATCTACAGATAACTCTGCTGAAGTGATCG
CTAAATTTGCTCAACAAGCAGATATTAAATATATATTAAAAGAAAAAAATCAAGGTCAATTATCCTCATTCAATGAAGCT
TTTTTAAATGCCTCTGGAGACATCATCTTTTTTTTAGATGCTGATGATGCTTATGAACCTGAGTATTTAGAAACTGTTCT
GAATTTTTATAATAGACGTAGCGAATGTGATTTTGTATTTTGTGCCTATAAAAAATTTGGAGCAGTAGAAGGCACATTTC
AAGATTATGAAATAGATGTAGATTTGGGTTACTCAGTCATTAGAACTTTATGTAATGGCGAATGGATTGGCTCTATAACT
TCAACATTGTCAATGCGTAGAGACATCCTGAGGAAAGTTTTACCTATTCCCAATACAGAAGATTGGCGCGTTAGGGCTGA
TGATTGTTTGGTGTGGGGAGCTTCTTTAGTGGGGGCGAAGAAATTTTATTTATCTCAACCTTTAGTAAGGTACAGAATAC
ATCAAAACAACCAATTTCATAACAGTAAATTTGTAAATACAGATAAAGATTACGAATATAAGAGATTTTGGAAGCGCAAT
TCATTATTTAATTACATCCTGCAAAAAAATAATTTAGAGTTACCTTTTTTATTAGCTTTTACATCGCTGAATGAGCTAAA
AACAATACCATGTCCTAATAATCAAGATTTTATATCGTATTTAAAAATAATATTTCTGTTTGAGAAGAATGTGTATTGGA
AAATTAAGGGCATATTTTTATTATTTAATTATCTTGGCAAATTTTTGCTGAATGGAAAACTACAAATAAGGTAA

Upstream 100 bases:

>100_bases
AACTGAATACAGCATAATAAAAGTCTTTTTGTGAGTTCAGAAAAATTGGTTTTTATCAACCAACGTTCTTGTTTTTTGTT
CCCTTTTCAGACCCTTTCCT

Downstream 100 bases:

>100_bases
ATATTAATCAAATAAAACACAGATTATTTTCTTTAAATATGATGAATTTTGACAAATAGAAAAAAATATAGTTAAAATGC
TAAGTAAATTGAGGCTGTCA

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MDTKKIKTSCLINNYNYAAFLSEAVASTLRQTVKFDEIIIVDDASTDNSAEVIAKFAQQADIKYILKEKNQGQLSSFNEA
FLNASGDIIFFLDADDAYEPEYLETVLNFYNRRSECDFVFCAYKKFGAVEGTFQDYEIDVDLGYSVIRTLCNGEWIGSIT
STLSMRRDILRKVLPIPNTEDWRVRADDCLVWGASLVGAKKFYLSQPLVRYRIHQNNQFHNSKFVNTDKDYEYKRFWKRN
SLFNYILQKNNLELPFLLAFTSLNELKTIPCPNNQDFISYLKIIFLFEKNVYWKIKGIFLLFNYLGKFLLNGKLQIR

Sequences:

>Translated_317_residues
MDTKKIKTSCLINNYNYAAFLSEAVASTLRQTVKFDEIIIVDDASTDNSAEVIAKFAQQADIKYILKEKNQGQLSSFNEA
FLNASGDIIFFLDADDAYEPEYLETVLNFYNRRSECDFVFCAYKKFGAVEGTFQDYEIDVDLGYSVIRTLCNGEWIGSIT
STLSMRRDILRKVLPIPNTEDWRVRADDCLVWGASLVGAKKFYLSQPLVRYRIHQNNQFHNSKFVNTDKDYEYKRFWKRN
SLFNYILQKNNLELPFLLAFTSLNELKTIPCPNNQDFISYLKIIFLFEKNVYWKIKGIFLLFNYLGKFLLNGKLQIR
>Mature_317_residues
MDTKKIKTSCLINNYNYAAFLSEAVASTLRQTVKFDEIIIVDDASTDNSAEVIAKFAQQADIKYILKEKNQGQLSSFNEA
FLNASGDIIFFLDADDAYEPEYLETVLNFYNRRSECDFVFCAYKKFGAVEGTFQDYEIDVDLGYSVIRTLCNGEWIGSIT
STLSMRRDILRKVLPIPNTEDWRVRADDCLVWGASLVGAKKFYLSQPLVRYRIHQNNQFHNSKFVNTDKDYEYKRFWKRN
SLFNYILQKNNLELPFLLAFTSLNELKTIPCPNNQDFISYLKIIFLFEKNVYWKIKGIFLLFNYLGKFLLNGKLQIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36999; Mature: 36999

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKKIKTSCLINNYNYAAFLSEAVASTLRQTVKFDEIIIVDDASTDNSAEVIAKFAQQA
CCCHHEEHEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHC
DIKYILKEKNQGQLSSFNEAFLNASGDIIFFLDADDAYEPEYLETVLNFYNRRSECDFVF
CHHEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEE
CAYKKFGAVEGTFQDYEIDVDLGYSVIRTLCNGEWIGSITSTLSMRRDILRKVLPIPNTE
EEHHHCCCCCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
DWRVRADDCLVWGASLVGAKKFYLSQPLVRYRIHQNNQFHNSKFVNTDKDYEYKRFWKRN
CCEEECCCEEEECHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
SLFNYILQKNNLELPFLLAFTSLNELKTIPCPNNQDFISYLKIIFLFEKNVYWKIKGIFL
HHHHHHHHCCCCCCCCEEEECCHHHCEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHH
LFNYLGKFLLNGKLQIR
HHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MDTKKIKTSCLINNYNYAAFLSEAVASTLRQTVKFDEIIIVDDASTDNSAEVIAKFAQQA
CCCHHEEHEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHC
DIKYILKEKNQGQLSSFNEAFLNASGDIIFFLDADDAYEPEYLETVLNFYNRRSECDFVF
CHHEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEE
CAYKKFGAVEGTFQDYEIDVDLGYSVIRTLCNGEWIGSITSTLSMRRDILRKVLPIPNTE
EEHHHCCCCCCCCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
DWRVRADDCLVWGASLVGAKKFYLSQPLVRYRIHQNNQFHNSKFVNTDKDYEYKRFWKRN
CCEEECCCEEEECHHHHHHHHHHHCCCHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
SLFNYILQKNNLELPFLLAFTSLNELKTIPCPNNQDFISYLKIIFLFEKNVYWKIKGIFL
HHHHHHHHCCCCCCCCEEEECCHHHCEECCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHH
LFNYLGKFLLNGKLQIR
HHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]