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The map label for this gene is 17231920

Identifier: 17231920

GI number: 17231920

Start: 5306428

End: 5307663

Strand: Reverse

Name: 17231920

Synonym: all4428

Alternate gene names: NA

Gene position: 5307663-5306428 (Counterclockwise)

Preceding gene: 17231921

Following gene: 17231919

Centisome position: 82.75

GC content: 34.63

Gene sequence:

>1236_bases
ATGAATGTAAAGCTACCAGAAAAAATATTAACTATATTACTATTATTAATTGCTGTAGGCGCATTAACAATACATCCTGC
ACAAGAAATTTCAACCTCCCCTTTGGGCGGTGACAAGCTAGATACTCTATTTAATATAGTTTCATATTTAATTCTCTTCT
TCTTTATCATCTCTTACTGGAAAGGTTTTTTATATGTCATTACCAAAGAGCCTTTACAGTTCATTTTATTAGGAATAGTT
ATATTGTCTCTTTTGTGGTCTGAAGATATCAGGACTGCTCTGAACTATACAAGAGGGCTAATCAGAATATATTTATTAGC
AATATATTTAGCAATGCGCTATTCCATAAGAGAGCAAATGAGACTCATAGCTTTAGCTCTTGGTGTAGCCACATTATTAT
CTCTGTTTTTCTCTGCATTCCTGCCAGATTATATTCACAAAGCGCCTGAATTAGCAGGAATGTGGAGTGGAATTTATGGA
CATAAAAATGAACTAGGATACATGATGGCCTGGAGTGCAGGAATTTTTCTGCATCTAGCTTTGAGTAATTATCAATATAC
TTGGTTGAGGTGGATATTATGTAGTACAGCTACATCCCTCATTATCCTTTCCCGATCTACAACATCTTTGACAATTTTAT
TAACAATAATCCTGCTTTTACCTTTTTACAGATTTTTCAAAAAAACCAATTATAAATTACAAGTTATCATGATTGGTTTA
GCCTTAATACTACTCACACTTTCTACAATATTACTGATGACTAATATTGAAAATATAGTGGGTACTTCAGGTAAAGATTT
AACTTTTAATGGGCGTGTTGACCTCTGGGAACCAATAATTTCCAAGGTTTGGGAAAGACCTTGGTTCGGTTATGGATATT
ATGGGTTTTGGAATAGCTCTGAAGCGGCTAATGTTAGAGCGACCTACGAATGGGCGAGTAATTCCCATAATGGTTTCTTG
GAAATGTTATTAGACATAGGATTTTTAGGCTTCTTGGTATTTGCAGCCGGATTTATACGATTTTTTGTCCTAGCACTAGG
TCGAATTATTTCAGTAGCCAAAAAGCCAGAGGATTATTGGCCGATGCAAATGTTAATTATCATTGTTATCGTCAATTTTT
CCGAAGCTAGATTACTAACTCCTAGTTGGAATTGGTTAATGTATATCACAACTTCCTTATCCTTAGGTCTTAGCTATCAG
CGAATACGTATGGGTATCAAAGAAGAGCTTATATAG

Upstream 100 bases:

>100_bases
CGACTTTAGACATTTTTAAAGAGGAATTGAAGAAAAAAATTAATTATTCAAAATCCCATAAATAATTTTTCATAATTATT
ACAACTAGTAGAATCACACC

Downstream 100 bases:

>100_bases
TCAAATAAATTTAGGAGAACAAATTATGTCACAGGCTTTCTTAGCGAGCGAAAATGAACAGATTAAAGATTATTATGAAG
AGAATGGTTATGTAGTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: O-Antigen Polymerase Family

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MNVKLPEKILTILLLLIAVGALTIHPAQEISTSPLGGDKLDTLFNIVSYLILFFFIISYWKGFLYVITKEPLQFILLGIV
ILSLLWSEDIRTALNYTRGLIRIYLLAIYLAMRYSIREQMRLIALALGVATLLSLFFSAFLPDYIHKAPELAGMWSGIYG
HKNELGYMMAWSAGIFLHLALSNYQYTWLRWILCSTATSLIILSRSTTSLTILLTIILLLPFYRFFKKTNYKLQVIMIGL
ALILLTLSTILLMTNIENIVGTSGKDLTFNGRVDLWEPIISKVWERPWFGYGYYGFWNSSEAANVRATYEWASNSHNGFL
EMLLDIGFLGFLVFAAGFIRFFVLALGRIISVAKKPEDYWPMQMLIIIVIVNFSEARLLTPSWNWLMYITTSLSLGLSYQ
RIRMGIKEELI

Sequences:

>Translated_411_residues
MNVKLPEKILTILLLLIAVGALTIHPAQEISTSPLGGDKLDTLFNIVSYLILFFFIISYWKGFLYVITKEPLQFILLGIV
ILSLLWSEDIRTALNYTRGLIRIYLLAIYLAMRYSIREQMRLIALALGVATLLSLFFSAFLPDYIHKAPELAGMWSGIYG
HKNELGYMMAWSAGIFLHLALSNYQYTWLRWILCSTATSLIILSRSTTSLTILLTIILLLPFYRFFKKTNYKLQVIMIGL
ALILLTLSTILLMTNIENIVGTSGKDLTFNGRVDLWEPIISKVWERPWFGYGYYGFWNSSEAANVRATYEWASNSHNGFL
EMLLDIGFLGFLVFAAGFIRFFVLALGRIISVAKKPEDYWPMQMLIIIVIVNFSEARLLTPSWNWLMYITTSLSLGLSYQ
RIRMGIKEELI
>Mature_411_residues
MNVKLPEKILTILLLLIAVGALTIHPAQEISTSPLGGDKLDTLFNIVSYLILFFFIISYWKGFLYVITKEPLQFILLGIV
ILSLLWSEDIRTALNYTRGLIRIYLLAIYLAMRYSIREQMRLIALALGVATLLSLFFSAFLPDYIHKAPELAGMWSGIYG
HKNELGYMMAWSAGIFLHLALSNYQYTWLRWILCSTATSLIILSRSTTSLTILLTIILLLPFYRFFKKTNYKLQVIMIGL
ALILLTLSTILLMTNIENIVGTSGKDLTFNGRVDLWEPIISKVWERPWFGYGYYGFWNSSEAANVRATYEWASNSHNGFL
EMLLDIGFLGFLVFAAGFIRFFVLALGRIISVAKKPEDYWPMQMLIIIVIVNFSEARLLTPSWNWLMYITTSLSLGLSYQ
RIRMGIKEELI

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47070; Mature: 47070

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVKLPEKILTILLLLIAVGALTIHPAQEISTSPLGGDKLDTLFNIVSYLILFFFIISYW
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KGFLYVITKEPLQFILLGIVILSLLWSEDIRTALNYTRGLIRIYLLAIYLAMRYSIREQM
HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLIALALGVATLLSLFFSAFLPDYIHKAPELAGMWSGIYGHKNELGYMMAWSAGIFLHLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEH
LSNYQYTWLRWILCSTATSLIILSRSTTSLTILLTIILLLPFYRFFKKTNYKLQVIMIGL
HCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH
ALILLTLSTILLMTNIENIVGTSGKDLTFNGRVDLWEPIISKVWERPWFGYGYYGFWNSS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCEECCC
EAANVRATYEWASNSHNGFLEMLLDIGFLGFLVFAAGFIRFFVLALGRIISVAKKPEDYW
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PMQMLIIIVIVNFSEARLLTPSWNWLMYITTSLSLGLSYQRIRMGIKEELI
HHHHHHHHHHCCCCCCEEECCCCCEEEEEEHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNVKLPEKILTILLLLIAVGALTIHPAQEISTSPLGGDKLDTLFNIVSYLILFFFIISYW
CCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
KGFLYVITKEPLQFILLGIVILSLLWSEDIRTALNYTRGLIRIYLLAIYLAMRYSIREQM
HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLIALALGVATLLSLFFSAFLPDYIHKAPELAGMWSGIYGHKNELGYMMAWSAGIFLHLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEEH
LSNYQYTWLRWILCSTATSLIILSRSTTSLTILLTIILLLPFYRFFKKTNYKLQVIMIGL
HCCCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHH
ALILLTLSTILLMTNIENIVGTSGKDLTFNGRVDLWEPIISKVWERPWFGYGYYGFWNSS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCEECCC
EAANVRATYEWASNSHNGFLEMLLDIGFLGFLVFAAGFIRFFVLALGRIISVAKKPEDYW
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PMQMLIIIVIVNFSEARLLTPSWNWLMYITTSLSLGLSYQRIRMGIKEELI
HHHHHHHHHHCCCCCCEEECCCCCEEEEEEHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA