| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231919
Identifier: 17231919
GI number: 17231919
Start: 5305467
End: 5306402
Strand: Reverse
Name: 17231919
Synonym: all4427
Alternate gene names: NA
Gene position: 5306402-5305467 (Counterclockwise)
Preceding gene: 17231920
Following gene: 17231918
Centisome position: 82.73
GC content: 36.0
Gene sequence:
>936_bases ATGTCACAGGCTTTCTTAGCGAGCGAAAATGAACAGATTAAAGATTATTATGAAGAGAATGGTTATGTAGTTGTAAAAAA TGCTGTATCCCTTGAAAAAATAACAGATTTTATCAACAAGTATGAGAATTTTAAGATATCAAAAAACTATTACTTTCGAT CTCAAGATACTAACAGGGCAGAAAAACTTGCCATCAACGAAAAGGGATTCATAGAGCGTTCTATTCTCAATCCATTAGAG TTAGTATACCAAAAAGATTTTTGTCGTTCATCGTCAAATATTATTTGTGCAGATTCTGTTTCTCAGATATTAAGAACACT CACAGGTAAACAGAAACACACCATCTGGCAAACAATGTTTTTTGACAAATCAACTGGCACTGTAGCCCACCAAGATCATT ACTATTTAGATAGTGATCCCCCTGGTAACTTAATTGCGTGTTGGTATGCCCTTGAAGATATTCAAGAGGATGCAGGCGCT TTTTTTGTAGTTCCCAAGAGTCATAAGGGTTCTGTAATACCCAGAAAAACAGATGTTCCCTTGTTTAGTGATCATGAAGA ATACGCCAAAAACATTCAAAAATTAATCAATGAGCAAAGTTATCCAATACAGCCAATGCTGCTGGAAAAAGGTTCAGTCC TCTTTTGGCATCCTTATCTCATTCATGGTGCTTTTCAAAATACTAACCCAAAGTATTCTCGAAAATCTTTTACTGCACAC TTTCTACCAGAAGGATATAGTCGATTAGGCATTTCCAGGGTGAAACCTACTGTAATTTCTACTAATCCGAATATCCTTTC TTGGAAGAAGAACTTGCTGCATCATGCAGAAGCCAGTATTAGACATTGGCGTTATTGGCTACAGGTTAACTTAAGACCAA AGTCTCAACGTCCCTATCTAGAAATGCGTTCATCAGAATACTTAGATATCAAATAG
Upstream 100 bases:
>100_bases TATATCACAACTTCCTTATCCTTAGGTCTTAGCTATCAGCGAATACGTATGGGTATCAAAGAAGAGCTTATATAGTCAAA TAAATTTAGGAGAACAAATT
Downstream 100 bases:
>100_bases TTACTGAAATATTTACAAAAACCTAATGAAAAAATATTGCAATGAATGTTTTACTAATTAATAAATCTGATATTGATGGT GGTGCAGCTCGTGCAGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSQAFLASENEQIKDYYEENGYVVVKNAVSLEKITDFINKYENFKISKNYYFRSQDTNRAEKLAINEKGFIERSILNPLE LVYQKDFCRSSSNIICADSVSQILRTLTGKQKHTIWQTMFFDKSTGTVAHQDHYYLDSDPPGNLIACWYALEDIQEDAGA FFVVPKSHKGSVIPRKTDVPLFSDHEEYAKNIQKLINEQSYPIQPMLLEKGSVLFWHPYLIHGAFQNTNPKYSRKSFTAH FLPEGYSRLGISRVKPTVISTNPNILSWKKNLLHHAEASIRHWRYWLQVNLRPKSQRPYLEMRSSEYLDIK
Sequences:
>Translated_311_residues MSQAFLASENEQIKDYYEENGYVVVKNAVSLEKITDFINKYENFKISKNYYFRSQDTNRAEKLAINEKGFIERSILNPLE LVYQKDFCRSSSNIICADSVSQILRTLTGKQKHTIWQTMFFDKSTGTVAHQDHYYLDSDPPGNLIACWYALEDIQEDAGA FFVVPKSHKGSVIPRKTDVPLFSDHEEYAKNIQKLINEQSYPIQPMLLEKGSVLFWHPYLIHGAFQNTNPKYSRKSFTAH FLPEGYSRLGISRVKPTVISTNPNILSWKKNLLHHAEASIRHWRYWLQVNLRPKSQRPYLEMRSSEYLDIK >Mature_310_residues SQAFLASENEQIKDYYEENGYVVVKNAVSLEKITDFINKYENFKISKNYYFRSQDTNRAEKLAINEKGFIERSILNPLEL VYQKDFCRSSSNIICADSVSQILRTLTGKQKHTIWQTMFFDKSTGTVAHQDHYYLDSDPPGNLIACWYALEDIQEDAGAF FVVPKSHKGSVIPRKTDVPLFSDHEEYAKNIQKLINEQSYPIQPMLLEKGSVLFWHPYLIHGAFQNTNPKYSRKSFTAHF LPEGYSRLGISRVKPTVISTNPNILSWKKNLLHHAEASIRHWRYWLQVNLRPKSQRPYLEMRSSEYLDIK
Specific function: Unknown
COG id: COG5285
COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI5453884, Length=248, Percent_Identity=25.4032258064516, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI83281447, Length=117, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17544582, Length=260, Percent_Identity=22.3076923076923, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36304; Mature: 36172
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAFLASENEQIKDYYEENGYVVVKNAVSLEKITDFINKYENFKISKNYYFRSQDTNRA CCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCEEEECCEEEECCCCCCH EKLAINEKGFIERSILNPLELVYQKDFCRSSSNIICADSVSQILRTLTGKQKHTIWQTMF HHEEECCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCHHHHEEEHEE FDKSTGTVAHQDHYYLDSDPPGNLIACWYALEDIQEDAGAFFVVPKSHKGSVIPRKTDVP EECCCCCEEECCCEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC LFSDHEEYAKNIQKLINEQSYPIQPMLLEKGSVLFWHPYLIHGAFQNTNPKYSRKSFTAH CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEHHHEEEECCCCCCCCCCCCCEEE FLPEGYSRLGISRVKPTVISTNPNILSWKKNLLHHAEASIRHWRYWLQVNLRPKSQRPYL ECCCCHHHCCHHHCCCEEEECCCCEEHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCE EMRSSEYLDIK EECCCCCCCCC >Mature Secondary Structure SQAFLASENEQIKDYYEENGYVVVKNAVSLEKITDFINKYENFKISKNYYFRSQDTNRA CCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCEEEECCEEEECCCCCCH EKLAINEKGFIERSILNPLELVYQKDFCRSSSNIICADSVSQILRTLTGKQKHTIWQTMF HHEEECCCCCHHHHHCCHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCHHHHEEEHEE FDKSTGTVAHQDHYYLDSDPPGNLIACWYALEDIQEDAGAFFVVPKSHKGSVIPRKTDVP EECCCCCEEECCCEEECCCCCCCEEEHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCC LFSDHEEYAKNIQKLINEQSYPIQPMLLEKGSVLFWHPYLIHGAFQNTNPKYSRKSFTAH CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEEEHHHEEEECCCCCCCCCCCCCEEE FLPEGYSRLGISRVKPTVISTNPNILSWKKNLLHHAEASIRHWRYWLQVNLRPKSQRPYL ECCCCHHHCCHHHCCCEEEECCCCEEHHHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCE EMRSSEYLDIK EECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA