| Definition | Nostoc sp. PCC 7120, complete genome. |
|---|---|
| Accession | NC_003272 |
| Length | 6,413,771 |
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The map label for this gene is 17231917
Identifier: 17231917
GI number: 17231917
Start: 5303120
End: 5304136
Strand: Reverse
Name: 17231917
Synonym: all4425
Alternate gene names: NA
Gene position: 5304136-5303120 (Counterclockwise)
Preceding gene: 17231918
Following gene: 17231916
Centisome position: 82.7
GC content: 35.2
Gene sequence:
>1017_bases ATGTCAATACCTTTAGCTTTTATAATTTGTACAGAACCTGGTCGATTAGAAGCCCAATCTTTAATGCTGGCTACCAGTAT TCGTAAGTTCTGTGGCAATTTAAAAGACACACCTATATATAGTTTTCATCCTAGAGTTGGTGAGCCAATATCCCAGCAAA CCCAAGCAGCTTTTGCAGCATTACAGGTCATTCACCAACAAATTCCAATTAACCAAGAATTTCATGAGTACTATTTAGCA AATAAACCCTTAGTTTGTGCCTATGCAGAACAGAACATTGATGCAGAAATATTAGTTTTTCTCGATAGTGATAAATGCTT GTTTGCTGAACCAACAGAATTTTTACTGCCGAAAAATTGTAACGTGCGGGTGCGTCCTGAGTATGGTCAAGGAATCGGCT CGACAGGTTCACAAGACCCTCAAGAATGGTACTGGCAGAAATTATATCAAGTGCTGGGTGTTAAGCGTGAGATATTTGTT AACACGCCCATCGGGAATAAAAGAATTAGAGCCTATTGGAATTCTGGTTTAGTTGCTGTGAGAAGAAGTGCAGGTATATT TACAGCTTGGAAAGAAAATTTTACAAAAGTAATGCACCTTGACATCACTCCTCCTCAAGGAATTTACTTCGTTGAACAGT CTGTCTTGTCTGTGACACTATGTGCCTTAGCAGATAATGTAGAACATTTCTCTCTTAACTACAGTTATCCTTTACCTTTA CATAATCGCTTATCACCAGAACTACGGTTGCAGAAATGGGATGACATTACATCCATTCATTATTTCAATTTATTTTTTTA TAACGACTGGAATATACAGATTAGAAAATTGAAAAAATTCAATATTAATTCTAATAAATATAAGTGGTTATCTCAAGAAG TTATCAGGCTCAATATGCCTCGTACATCAGTGTTACATAGATATATGTTAGCAATTAGAAGAATAGAGCAAAAACTACAA AAATTCAATATAAAAATTAATTTGAGTAGTTTGATAGAGAAGACAGCCAAATTTTGA
Upstream 100 bases:
>100_bases CTTTAGAGCTGCAAGCTCGCCGCTATTCAGCCCTTTTTCAGGAAATATTACATAACAAAAATTAGTTTTTACTGGATCAT AAATTTTACAAGTAATTATT
Downstream 100 bases:
>100_bases AAATCAAATCTGCAAAAATAACGAAAAGTTTTCTATTTTTAAAGATTGTTTTCAAAAAAATTATATGAGGTAAATGAGAT GAAGCAGCCAACCCTAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSIPLAFIICTEPGRLEAQSLMLATSIRKFCGNLKDTPIYSFHPRVGEPISQQTQAAFAALQVIHQQIPINQEFHEYYLA NKPLVCAYAEQNIDAEILVFLDSDKCLFAEPTEFLLPKNCNVRVRPEYGQGIGSTGSQDPQEWYWQKLYQVLGVKREIFV NTPIGNKRIRAYWNSGLVAVRRSAGIFTAWKENFTKVMHLDITPPQGIYFVEQSVLSVTLCALADNVEHFSLNYSYPLPL HNRLSPELRLQKWDDITSIHYFNLFFYNDWNIQIRKLKKFNINSNKYKWLSQEVIRLNMPRTSVLHRYMLAIRRIEQKLQ KFNIKINLSSLIEKTAKF
Sequences:
>Translated_338_residues MSIPLAFIICTEPGRLEAQSLMLATSIRKFCGNLKDTPIYSFHPRVGEPISQQTQAAFAALQVIHQQIPINQEFHEYYLA NKPLVCAYAEQNIDAEILVFLDSDKCLFAEPTEFLLPKNCNVRVRPEYGQGIGSTGSQDPQEWYWQKLYQVLGVKREIFV NTPIGNKRIRAYWNSGLVAVRRSAGIFTAWKENFTKVMHLDITPPQGIYFVEQSVLSVTLCALADNVEHFSLNYSYPLPL HNRLSPELRLQKWDDITSIHYFNLFFYNDWNIQIRKLKKFNINSNKYKWLSQEVIRLNMPRTSVLHRYMLAIRRIEQKLQ KFNIKINLSSLIEKTAKF >Mature_337_residues SIPLAFIICTEPGRLEAQSLMLATSIRKFCGNLKDTPIYSFHPRVGEPISQQTQAAFAALQVIHQQIPINQEFHEYYLAN KPLVCAYAEQNIDAEILVFLDSDKCLFAEPTEFLLPKNCNVRVRPEYGQGIGSTGSQDPQEWYWQKLYQVLGVKREIFVN TPIGNKRIRAYWNSGLVAVRRSAGIFTAWKENFTKVMHLDITPPQGIYFVEQSVLSVTLCALADNVEHFSLNYSYPLPLH NRLSPELRLQKWDDITSIHYFNLFFYNDWNIQIRKLKKFNINSNKYKWLSQEVIRLNMPRTSVLHRYMLAIRRIEQKLQK FNIKINLSSLIEKTAKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39371; Mature: 39240
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIPLAFIICTEPGRLEAQSLMLATSIRKFCGNLKDTPIYSFHPRVGEPISQQTQAAFAA CCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHH LQVIHQQIPINQEFHEYYLANKPLVCAYAEQNIDAEILVFLDSDKCLFAEPTEFLLPKNC HHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCEEEECCHHHCCCCCC NVRVRPEYGQGIGSTGSQDPQEWYWQKLYQVLGVKREIFVNTPIGNKRIRAYWNSGLVAV CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEEE RRSAGIFTAWKENFTKVMHLDITPPQGIYFVEQSVLSVTLCALADNVEHFSLNYSYPLPL ECCCCEEEHHHHCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCC HNRLSPELRLQKWDDITSIHYFNLFFYNDWNIQIRKLKKFNINSNKYKWLSQEVIRLNMP CCCCCCCHHHCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHEECCC RTSVLHRYMLAIRRIEQKLQKFNIKINLSSLIEKTAKF HHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHCC >Mature Secondary Structure SIPLAFIICTEPGRLEAQSLMLATSIRKFCGNLKDTPIYSFHPRVGEPISQQTQAAFAA CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHH LQVIHQQIPINQEFHEYYLANKPLVCAYAEQNIDAEILVFLDSDKCLFAEPTEFLLPKNC HHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCEEEEEEECCCCEEEECCHHHCCCCCC NVRVRPEYGQGIGSTGSQDPQEWYWQKLYQVLGVKREIFVNTPIGNKRIRAYWNSGLVAV CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCEEEE RRSAGIFTAWKENFTKVMHLDITPPQGIYFVEQSVLSVTLCALADNVEHFSLNYSYPLPL ECCCCEEEHHHHCCEEEEEEECCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEECCCCCC HNRLSPELRLQKWDDITSIHYFNLFFYNDWNIQIRKLKKFNINSNKYKWLSQEVIRLNMP CCCCCCCHHHCCCCCCCEEEEEEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHEECCC RTSVLHRYMLAIRRIEQKLQKFNIKINLSSLIEKTAKF HHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA